EY710281

Overview
NameEY710281
Unique NameEY710281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_MACMU (Superoxide dismutase [Cu-Zn] OS=Macaca mulatta GN=SOD1 PE=2 SV=3)

HSP 1 Score: 163.31 bits (412), Expect = 1.928e-39
Identity = 79/150 (52.67%), Postives = 99/150 (66.00%), Query Frame = 1
Query:   94 VKAVAVLGGTEGVKGTVSFAQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            +KAV VL G   V+GT++F Q E +GP  V GS++GL  G HGFHVH  GD T GC S GPHFNP  ++HG P+D+ RH              A  +  D+ I LSG +SIIGR +VVH   DDLGKGG+E +K TGNAGGR+ACG+IG+
Sbjct:    3 MKAVCVLKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGI 152          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_MACFU (Superoxide dismutase [Cu-Zn] OS=Macaca fuscata fuscata GN=SOD1 PE=2 SV=3)

HSP 1 Score: 163.31 bits (412), Expect = 1.928e-39
Identity = 79/150 (52.67%), Postives = 99/150 (66.00%), Query Frame = 1
Query:   94 VKAVAVLGGTEGVKGTVSFAQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            +KAV VL G   V+GT++F Q E +GP  V GS++GL  G HGFHVH  GD T GC S GPHFNP  ++HG P+D+ RH              A  +  D+ I LSG +SIIGR +VVH   DDLGKGG+E +K TGNAGGR+ACG+IG+
Sbjct:    3 MKAVCVLKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGI 152          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_MACFA (Superoxide dismutase [Cu-Zn] OS=Macaca fascicularis GN=SOD1 PE=2 SV=3)

HSP 1 Score: 163.31 bits (412), Expect = 1.928e-39
Identity = 79/150 (52.67%), Postives = 99/150 (66.00%), Query Frame = 1
Query:   94 VKAVAVLGGTEGVKGTVSFAQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            +KAV VL G   V+GT++F Q E +GP  V GS++GL  G HGFHVH  GD T GC S GPHFNP  ++HG P+D+ RH              A  +  D+ I LSG +SIIGR +VVH   DDLGKGG+E +K TGNAGGR+ACG+IG+
Sbjct:    3 MKAVCVLKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGI 152          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_BOMMO (Superoxide dismutase [Cu-Zn] OS=Bombyx mori PE=1 SV=3)

HSP 1 Score: 162.925 bits (411), Expect = 2.518e-39
Identity = 84/150 (56.00%), Postives = 97/150 (64.67%), Query Frame = 1
Query:   97 KAVAVLGGTEGVKGTVSFAQEGD-GPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTAT-FTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            KAV VL G   V GTV F Q+ +  P  VSG + GL  G HGFHVH  GD TNGC S G HFNP  ++HG P    RH               T  ++ D+QI L GPNSIIGR +VVHADPDDLG GGHEL+K+TGNAGGR+ACG+IGL
Sbjct:    4 KAVCVLRGD--VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGHELSKTTGNAGGRIACGVIGL 151          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_CEBAP (Superoxide dismutase [Cu-Zn] OS=Cebus apella GN=SOD1 PE=2 SV=3)

HSP 1 Score: 160.614 bits (405), Expect = 1.249e-38
Identity = 78/150 (52.00%), Postives = 98/150 (65.33%), Query Frame = 1
Query:   94 VKAVAVLGGTEGVKGTVSFAQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            +KAV VL G   V+GT++F Q E +GP  V GS++GL  G HGFHVH  GD T GC S GPHFNP  ++HG PED+ RH              A  ++ D+ I LSG +SIIGR +VVH   DDLGKGG+E +  TGNAG R+ACG+IG+
Sbjct:    3 MKAVCVLKGDGPVQGTINFEQKESNGPVKVWGSITGLAEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPEDEERHVGDLGNVTAGKDGVAKVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_CARCR (Superoxide dismutase [Cu-Zn] OS=Caretta caretta PE=1 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 1.249e-38
Identity = 79/161 (49.07%), Postives = 98/161 (60.87%), Query Frame = 1
Query:   94 VKAVAVLGGT------------EGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            VKAV VL G             E VKG + F Q+G+GP T+SGS++GL  G HGFHVH  GD TNGC S G HFNP GK HG P+D+ RH              A   + D+ I L+G  SIIGR +VVH   DDLGKGG++ +  TGNAG R+ACG++G+
Sbjct:    4 VKAVCVLKGEDPVKEPVKGPVKEPVKGIIYFEQQGNGPVTLSGSITGLTEGKHGFHVHEFGDNTNGCTSAGAHFNPPGKNHGGPQDNERHVGDLGNVIANKEGVAEVCIKDSLISLTGSQSIIGRTMVVHEKEDDLGKGGNDESLKTGNAGSRLACGVVGI 164          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_SHEEP (Superoxide dismutase [Cu-Zn] OS=Ovis aries GN=SOD1 PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.632e-38
Identity = 78/148 (52.70%), Postives = 95/148 (64.19%), Query Frame = 1
Query:   97 KAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            KAV VL G   V+GT+ F  +GD    V+GS++GL  G HGFHVH  GD T GC S GPHFNP  K+HG P+D+ RH              A   +VD  I LSG  SIIGR +VVH  PDDLG+GG+E +  TGNAGGR+ACG+IG+
Sbjct:    4 KAVCVLKGDGPVQGTIRFEAKGD-KVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVKADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGGRLACGVIGI 150          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_BRUPA (Superoxide dismutase [Cu-Zn] OS=Brugia pahangi GN=SODC PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.783e-38
Identity = 82/150 (54.67%), Postives = 99/150 (66.00%), Query Frame = 1
Query:  103 VAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG-GHELNKS--TGNAGGRVACGIIGL 540
            +AVL G + V G + F QE +G PTT+SG + GL PG HGFHVH  GDTTNGC+S GPHFNP  K HG P D+ RH             TA   + D  + L GPNSIIGR++VVHAD DDLGKG G + ++S  TGNAG RVACGI+ +
Sbjct:    6 IAVLRG-DNVSGIIRFKQEKEGSPTTISGEIKGLTPGLHGFHVHQYGDTTNGCISAGPHFNPYNKTHGGPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVHADQDDLGKGVGDKKDESLKTGNAGARVACGIVAV 154          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_BOSMU (Superoxide dismutase [Cu-Zn] OS=Bos mutus grunniens GN=SOD1 PE=2 SV=3)

HSP 1 Score: 159.458 bits (402), Expect = 2.783e-38
Identity = 77/148 (52.03%), Postives = 95/148 (64.19%), Query Frame = 1
Query:   97 KAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            KAV VL G   V+GT+ F  +GD    V+GS++GL  G HGFHVH  GD T GC S GPHFNP  K+HG P+D+ RH              A   +VD+ I LSG  SIIGR +VVH  PDDLG+GG+E +  TGNAG R+ACG+IG+
Sbjct:    4 KAVCVLKGDGPVQGTIHFEAKGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAVVDIVDSLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLACGVIGI 150          
BLAST of EY710281 vs. ExPASy Swiss-Prot
Match: SODC_CANFA (Superoxide dismutase [Cu-Zn] OS=Canis familiaris GN=SOD1 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.635e-38
Identity = 76/149 (51.01%), Postives = 94/149 (63.09%), Query Frame = 1
Query:   94 VKAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELNKSTGNAGGRVACGIIGL 540
            +KAV VL G   V+GT+ F Q+G GP  VSG+++GL  G HGFHVH   D T GC S GPHFNP  K+HG P+D  RH              A  ++ D+ I LSG  SIIGR +VVH   DDLGKG +E +  TGNAG R+ACG+IG+
Sbjct:    3 MKAVCVLKGQGPVEGTIHFVQKGSGPVVVSGTITGLTEGEHGFHVHQFEDXTQGCTSAGPHFNPLSKKHGGPKDQERHVGDLGNVTAGKDGVAIVSIEDSLIALSGDYSIIGRTMVVHEKRDDLGKGDNEESTQTGNAGSRLACGVIGI 151          
The following BLAST results are available for this feature:
BLAST of EY710281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
SODC_MACMU1.928e-3952.67Superoxide dismutase [Cu-Zn] OS=Macaca mulatta GN=... [more]
SODC_MACFU1.928e-3952.67Superoxide dismutase [Cu-Zn] OS=Macaca fuscata fus... [more]
SODC_MACFA1.928e-3952.67Superoxide dismutase [Cu-Zn] OS=Macaca fasciculari... [more]
SODC_BOMMO2.518e-3956.00Superoxide dismutase [Cu-Zn] OS=Bombyx mori PE=1 S... [more]
SODC_CEBAP1.249e-3852.00Superoxide dismutase [Cu-Zn] OS=Cebus apella GN=SO... [more]
SODC_CARCR1.249e-3849.07Superoxide dismutase [Cu-Zn] OS=Caretta caretta PE... [more]
SODC_SHEEP1.632e-3852.70Superoxide dismutase [Cu-Zn] OS=Ovis aries GN=SOD1... [more]
SODC_BRUPA2.783e-3854.67Superoxide dismutase [Cu-Zn] OS=Brugia pahangi GN=... [more]
SODC_BOSMU2.783e-3852.03Superoxide dismutase [Cu-Zn] OS=Bos mutus grunnien... [more]
SODC_CANFA3.635e-3851.01Superoxide dismutase [Cu-Zn] OS=Canis familiaris G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-A09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710281 ID=EY710281; Name=EY710281; organism=Citrus sinensis; type=EST; length=975bp
ACACTCTCTCTCTCTCTCACTCCCTCTTTCTCTCTACAAGCCCTCTTCAT
TTTCCTCCCTCCAAGGGGTGTTCTGAGATCACACAGCACAATGGTGAAAG
CAGTTGCAGTTCTTGGTGGAACTGAGGGTGTCAAGGGAACTGTTTCCTTT
GCCCAGGAAGGAGATGGTCCAACAACTGTATCAGGAAGCCTCTCTGGTCT
CAAGCCTGGTCCTCATGGATTCCATGTTCATGCTCTTGGAGACACAACAA
ATGGTTGCATGTCTACTGGACCCCACTTTAACCCTGCTGGAAAAGAACAT
GGAGCTCCAGAGGATGATAATCGTCATGCTGGTGATTTAGGAAATGTCAA
TGTTGGTGATGATGGTACTGCTACTTTTACAGTTGTTGACAATCAGATTC
CACTTTCTGGACCAAATTCCATTATTGGAAGGGCTGTTGTAGTCCACGCA
GATCCCGATGATCTTGGCAAGGGCGGTCATGAGCTGAACAAAAGCACTGG
AAATGCTGGTGGCAGAGTAGCTTGCGGCATCATTGGCCTCCAAGGGTGAA
GCCTTATCTCATCGGACAATAATAAATTCATTTGATATGGATGTTTTGAG
TGCATTATAGTCCATATATGCTTGAGTGTGACTTTTCAGAATATGATTCT
TGAAAAAAAAAAATCAATAACTTTGTTGGGGAACCTTGGAAGGTTTTTCT
TAAAATCCCCCTCCTTTAATTTTCATTTTTAATTAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAGGGGGGGCCCCCTCTCAAGAGAATCCAAACCTTAAC
AACCCCGGGGGCAGGGCAAAGTTCCAAAACTTCTTTTTATAAGGGGCCCC
CCAAAAATTTTAATTTTACCGGGGGGCCCCCCCCTTTTTTAAACACCCCC
CCCGGGGAGAGGGGGGAAAAAAAACCCCCGGGGGGGGTTTTACCCCCCCA
CACTTTTTAATATCTCCCCCCCTTT
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