EY710274

Overview
NameEY710274
Unique NameEY710274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1036
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 4.797e-44
Identity = 88/187 (47.06%), Postives = 112/187 (59.89%), Query Frame = 3
Query:   72 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIKVQGLKGNRCQKTGAKTGKHIRFN 608
            GGW   HATFY              YGNL+SQ                   CGACF++ C +DP+WC+ GSIIV+ATNFCPP        GGWC+PP  HFDL++P F  IAQYRAG VPV +RRV C+  GG +FTING+ YF+L+LITNVG A ++RA S+K  G K ++ Q      G++ + N
Sbjct:   30 GGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLK--GSKTDQWQSMSRNWGQNWQSN 214          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.027e-43
Identity = 85/166 (51.20%), Postives = 99/166 (59.64%), Query Frame = 3
Query:   72 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            G W  AHATFY              YGNLYSQ                  SCGACF+I C NDP+WC  G  S+ VTATNFCPP        GGWC+PP  HFDL+ PVF  IA+YRAG VP+ YRRV C+ +GG +FTINGH YFNL+LITNV  A ++   S+K
Sbjct:   32 GSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVK 197          

HSP 2 Score: 24.2534 bits (51), Expect = 1.027e-43
Identity = 7/18 (38.89%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  536 QSSRIKGQPMSKNWGQNW 589
            + S+     +++NWGQNW
Sbjct:  197 KGSKTGWMSLTRNWGQNW 214          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.744e-43
Identity = 86/175 (49.14%), Postives = 102/175 (58.29%), Query Frame = 3
Query:   51 VSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDP--QWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            +    G G W +AHATFY              YGNLYSQ                  SCGACF+I C N P  +WC  GS  I++TATNFCPP        GGWC+PP  HFDL+ P+F HIA+YRAG VPV YRRV C+  GG +FTING  YFNL+LITNV  A ++  AS+K
Sbjct:   27 IPGAYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVK 201          

HSP 2 Score: 29.261 bits (64), Expect = 1.744e-43
Identity = 9/15 (60.00%), Postives = 13/15 (86.67%), Query Frame = 2
Query:  560 PMSKNWGQNW*THQI 604
            PMS+NWGQNW ++ +
Sbjct:  209 PMSRNWGQNWQSNSV 223          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.381e-43
Identity = 92/204 (45.10%), Postives = 113/204 (55.39%), Query Frame = 3
Query:   21 VILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIKVQGLKGNRCQKTGAKTGKHIRFN 608
            +I  +  L L  +    GGW   HATFY              YGNLY Q                  +CGAC+++ C +DP+WCL  +I VTATNFCPP        GGWC+PP  HFDL++P F  IAQYRAG VPV +RRV C   GG +FTINGHSYFNL+LI+NVG A +V A SIK  G K    Q      G++ + N
Sbjct:   11 IISIISVLFLQGTHGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIK--GSKTQSWQAMSRNWGQNWQSN 212          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.963e-43
Identity = 83/166 (50.00%), Postives = 100/166 (60.24%), Query Frame = 3
Query:   72 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            G WINAHATFY              YGNLYSQ                  SCG+CF++ C NDP WCL G  SI++TATNFCPP        GGWC+PP  HFDL+ P+F  IA+Y+AG VPV YRR+ C+  GG +FTING  YFNL+L+TNV  A +V   S+K
Sbjct:   30 GPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVK 195          

HSP 2 Score: 25.0238 bits (53), Expect = 2.963e-43
Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 2
Query:  563 MSKNWGQNW 589
            +S+NWGQNW
Sbjct:  204 LSRNWGQNW 212          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.113e-42
Identity = 83/173 (47.98%), Postives = 100/173 (57.80%), Query Frame = 3
Query:   51 VSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            +  V   G W NAHATFY              YGNLYSQ                  SCGACF+I C +DP+WC+ G  SI+VTATNFCPP        GGWC+PP  HFDL+ P+F  I  YRAG VPV YRRV C+  GG +FT+NG  YFNL+L+TNV  A ++   S+K
Sbjct:   27 IPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVK 199          

HSP 2 Score: 26.1794 bits (56), Expect = 1.113e-42
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 2
Query:  563 MSKNWGQNW 589
            MS+NWGQNW
Sbjct:  208 MSRNWGQNW 216          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 5.450e-42
Identity = 82/173 (47.40%), Postives = 99/173 (57.23%), Query Frame = 3
Query:   51 VSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            +  V   GGW  AHATFY              YGNLYSQ                  SCGACF++ CA+DP+WC  GS  I +TATNFCPP        GGWC+PP  HFDL+ P+F  IA+YRAG VPV +RRV C+  GG +FTING  YFNL+L+TNV  A  +    +K
Sbjct:   22 IPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVK 194          

HSP 2 Score: 26.5646 bits (57), Expect = 5.450e-42
Identity = 8/14 (57.14%), Postives = 12/14 (85.71%), Query Frame = 2
Query:  563 MSKNWGQNW*THQI 604
            MS+NWGQNW ++ +
Sbjct:  203 MSRNWGQNWQSNSV 216          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 4.646e-39
Identity = 83/207 (40.10%), Postives = 115/207 (55.56%), Query Frame = 3
Query:   21 VILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIKVQGLKGNRCQKTGAKTGKHIRFN 608
            +I    F   +SSV    GW+ AHATFY              YGNLY+                   SCG C+QI+C     PQWCL+G SI +TATNFCPP        GGWC+PP  HFD++QP F  IA+Y+AG VP++Y++V C+ +GG +FTING +YF L+LI+NV    E+  + + ++G K N+ +      G + + N
Sbjct:   11 MIFSTMFFMKISSVSA--GWLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEI--SKVWIKGSKSNKWETMSRNWGANYQSN 213          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 3.381e-38
Identity = 79/180 (43.89%), Postives = 97/180 (53.89%), Query Frame = 3
Query:   24 ILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            +  V  ++   +  G  GW +  ATFY              YGNLYS                   SCGACF++ C      CL G++ VTATN CPP        GGWC+PP  HFD+++P F  IAQ RAG VPV YRRV C   GG +FTI GHSYFNL+L+TNVG A +V A S+K
Sbjct:    9 VAAVAAMAAEVAAGGDSGWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAVTATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVK 187          

HSP 2 Score: 25.7942 bits (55), Expect = 3.381e-38
Identity = 10/18 (55.56%), Postives = 11/18 (61.11%), Query Frame = 2
Query:  536 QSSRIKGQPMSKNWGQNW 589
            + SR   Q MS NWG NW
Sbjct:  187 KGSRSGWQAMSHNWGANW 204          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.933e-38
Identity = 88/212 (41.51%), Postives = 112/212 (52.83%), Query Frame = 3
Query:    9 PAL*VILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCAN----DPQWCLRG----SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIKVQGLKGNRCQKTGAKTGKH 596
            P L V+L +      SS    G W +AHATFY              YGN Y Q                  SCGACF++ C      D + CL      SI+VTAT+ CP         GGWC+PP HHFDLSQP F  IA++++G VPV YRRV C+  GG +FTINGHSYFNL+L++NVG A +V A ++K  G +  R Q      G++
Sbjct:    7 PILLVLLSLSSSLSSSSAAAAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQN 218          
The following BLAST results are available for this feature:
BLAST of EY710274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
EXPA2_ARATH4.797e-4447.06Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 ... [more]
EXP16_ARATH1.027e-4351.20Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=... [more]
EXPA7_ORYSJ1.744e-4349.14Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA8_ARATH2.381e-4345.10Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 ... [more]
EXPA9_ARATH2.963e-4350.00Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 ... [more]
EXPA3_ARATH1.113e-4247.98Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 ... [more]
EXPA6_ARATH5.450e-4247.40Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 ... [more]
EXP17_ARATH4.646e-3940.10Putative expansin-A17 OS=Arabidopsis thaliana GN=E... [more]
EXP11_ORYSJ3.381e-3843.89Expansin-A11 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP21_ORYSJ3.933e-3841.51Expansin-A21 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-A02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710274 ID=EY710274; Name=EY710274; organism=Citrus sinensis; type=EST; length=1036bp
CCACGCGTCCGGCTCTTTGAGTGATTCTTTGTGTTGGGTTTCTCTCATTG
GTCTCATCCGTTCAAGGTTATGGAGGTTGGATTAATGCTCATGCAACTTT
CTATGGAGGTGGTGATGCTTCTGGCACAATGGGGGGCGCTTGTGGGTACG
GCAATTTGTACAGCCAAGGTTATGGTACTAATACCGCAGCACTTAACACT
GCTTTGTTCAACAATGGCCTAAGTTGTGGAGCTTGCTTTCAAATTATGTG
CGCTAATGACCCGCAATGGTGCCTGCGTGGCTCCATCATTGTCACTGCCA
CTAACTTTTGCCCTCCTGGAGGCTGGTGTGATCCTCCTAACCACCACTTT
GATCTCTCTCAGCCTGTCTTCCAACACATTGCCCAGTATAGAGCTGGTAA
TGTTCCTGTAATCTACAGAAGGGTGAAATGCAAGATAAATGGGGGAAATA
AGTTCACAATCAATGGTCATTCTTACTTCAATTTAATTCTAATAACAAAC
GTGGGTAGAGCTAGTGAAGTGCGTGCTGCATCCATCAAAGTTCAAGGATT
AAAGGGCAACCGATGTCAAAAAACTGGGGCCAAAACTGGTAAACACATCA
GATTTAATAGACAAAGCCAATTTTAGATGTAACCACAGAAAAGCCAAAAG
GTTGATCTATAAAAGTTCCACCTACAATGGGCATTTGAGAAACATATCAG
GAAGAAAATCAAAAATAAGGATAATTAAGTAAAGAAGCAACGCATTATAA
ATTATAATACCTCAACAAAGGGGGGGGAAATAATATCCTGATTGGCCCAT
AGGCTAAAACAATATCAAAAGAGTGCAATATATTTTATATTTAAATTAAG
AACATAGAGGTAAAAAAAAATTAAAAAATTGTTAAAAAATGACAATAAAA
GATGAGTAATGATGATAGAAGAATTTCATAACTTAAATGTGAGTAGAAGA
ATTAAACATAAATAATAAAAACATAATAAAAAACAAAATAAACAAGCTGA
TAATATATCAAACAATATGCACTCATTAAATGACCA
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