EY710274

Overview
NameEY710274
Unique NameEY710274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1036
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 5.730e-38
Identity = 74/160 (46.25%), Postives = 91/160 (56.88%), Query Frame = 3
Query:   78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGSIIVTATNFCPP------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            W +A ATFY              YG+L+ Q                  +CGAC+QIMC NDPQWCL GS+ +TATNFCPP      G WC+PP  HFDLS P+F  IAQY+AG VPV YRR+ C   GG KF   G+ YF +IL  NVG A +++   +K
Sbjct:   48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCPPDYSKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVK 207          

HSP 2 Score: 26.1794 bits (56), Expect = 5.730e-38
Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 2
Query:  563 MSKNWGQNW*T 595
            M KNWGQNW T
Sbjct:  216 MQKNWGQNWTT 226          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 3.330e-37
Identity = 83/195 (42.56%), Postives = 108/195 (55.38%), Query Frame = 3
Query:   66 GYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQW-CLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIKVQG---LKGNRCQKTGAKTGKHIRFN 608
            G G W   HATFY              YGNLYSQ                  SCG+C+++ CA D +  CL G  ++ VTATNFCPP        GGWC+PP  HFDL++P F  IA++ AG VPV +RRV C   GG +FT+NGH+YFNL+L+TNVG A +VR+ ++K  G     G R Q      G++ + N
Sbjct:   24 GLGQWQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSN 218          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 3.648e-37
Identity = 73/160 (45.62%), Postives = 91/160 (56.88%), Query Frame = 3
Query:   78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGSIIVTATNFCPP------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            W +A ATFY              YG+L+ Q                  +CGAC+QIMC +DPQWCL G+I +TATNFCPP      G WC+PP  HFDLS P+F  IAQY+AG VPV YRR+ C   GG KF   G+ YF +IL  NVG A +++   +K
Sbjct:   55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNFCPPDYSKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVK 214          

HSP 2 Score: 26.1794 bits (56), Expect = 3.648e-37
Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 2
Query:  563 MSKNWGQNW*T 595
            M KNWGQNW T
Sbjct:  223 MQKNWGQNWTT 233          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.819e-36
Identity = 72/166 (43.37%), Postives = 94/166 (56.63%), Query Frame = 3
Query:   75 GWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            GW+ AHATFY              YGNLY+Q                  +CG C++++C    D  WC  G S+ +TATNFCPP        GGWC+PP  HFD++QP ++ I  YR G +PVIY+RV C   GG +FTINGH YF L+L+TNVG A  ++A  +K
Sbjct:   33 GWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPGVSVTITATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVK 198          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.141e-36
Identity = 74/183 (40.44%), Postives = 100/183 (54.64%), Query Frame = 3
Query:   24 ILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC--ANDPQWCLRGSII-VTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            +L        +S    GGW++  ATFY              YGNLY+Q                  SCG C+ IMC  +  P+WC  G+ + +TATN CPP        GGWC+PP  HFD+SQP ++ I  YRAG VPV+Y++VKC   GG +FT++G +YF L+LITNV  +  V+A S+K
Sbjct:    9 VLAAALCITSASAAAAGGWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGTAVTITATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVK 191          

HSP 2 Score: 25.0238 bits (53), Expect = 5.141e-36
Identity = 9/23 (39.13%), Postives = 14/23 (60.87%), Query Frame = 2
Query:  536 QSSRIKGQ-----PMSKNWGQNW 589
            Q+  +KG      P+++NWG NW
Sbjct:  186 QAMSVKGSKTGWIPLARNWGANW 208          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 1.134e-35
Identity = 71/164 (43.29%), Postives = 92/164 (56.10%), Query Frame = 3
Query:   78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCAND--PQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASI 536
            W+ AHATFY              YG+LYSQ                  SCG C++I C     PQWC  G ++ +TATNFCPP        GGWC+PP  HFD++QP ++ I  YRAG +PVIY+RV C   GG +FTINGH YFNL+L+TNV     +++  +
Sbjct:   52 WLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCRPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDV 215          

HSP 2 Score: 24.2534 bits (51), Expect = 1.134e-35
Identity = 7/10 (70.00%), Postives = 8/10 (80.00%), Query Frame = 2
Query:  560 PMSKNWGQNW 589
            PM +NWG NW
Sbjct:  225 PMVRNWGANW 234          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 3.266e-35
Identity = 69/160 (43.12%), Postives = 88/160 (55.00%), Query Frame = 3
Query:   78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGG------WCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            W +A ATFY              YGNL+ Q                  +CGAC++IMC  DPQWCL GS+ +TATNFCP         WC+PP  HFDLS  +F  IA+Y+AG VPV YRR+ C   GG KF   G+ YF ++LI NVG A +++   +K
Sbjct:   58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDLWCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVK 217          

HSP 2 Score: 26.5646 bits (57), Expect = 3.266e-35
Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 2
Query:  563 MSKNWGQNW*THQI 604
            M KNWGQNW T  +
Sbjct:  226 MKKNWGQNWTTSTV 239          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 4.256e-35
Identity = 69/160 (43.12%), Postives = 88/160 (55.00%), Query Frame = 3
Query:   78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGG------WCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            W +A ATFY              YGNL+ Q                  +CGAC++IMC  DPQWCL GS+ +TATNFCP         WC+PP  HFDLS  +F  IA+Y+AG VPV YRR+ C   GG KF   G+ YF ++LI NVG A +++   +K
Sbjct:   52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDLWCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVK 211          

HSP 2 Score: 26.1794 bits (56), Expect = 4.256e-35
Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 2
Query:  563 MSKNWGQNW*T 595
            M KNWGQNW T
Sbjct:  220 MKKNWGQNWTT 230          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.552e-35
Identity = 78/167 (46.71%), Postives = 90/167 (53.89%), Query Frame = 3
Query:   78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC-ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIKVQG 548
            W  A ATFY              YG+LY                    SCGACF I C     QWC  G SI VTATNFCPP        GGWC+PP  HFD+SQP ++ IA YRAG VPV YRRV C+ +GG +F +NGHSYF L+L+TNVG +  V    IK  G
Sbjct:   25 WTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGTSITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSG 191          

HSP 2 Score: 23.8682 bits (50), Expect = 5.552e-35
Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 2
Query:  563 MSKNWGQNW 589
            MS+NWG NW
Sbjct:  197 MSRNWGANW 205          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 7.204e-35
Identity = 75/163 (46.01%), Postives = 91/163 (55.83%), Query Frame = 3
Query:   69 YGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGSIIVTATNFCPPG------GWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            + GW +  ATFY              YG+L+ Q                   CGAC++IMC + PQWCL GSI +TATNFCPP        WC+PP  HFDLSQP+F  IA+Y+AG VPV +RRV C   GG KF I G+ +F +IL  NVG A  VRA  IK
Sbjct:   87 HSGWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNFCPPDFTKPNDNWCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIK 249          

HSP 2 Score: 23.0978 bits (48), Expect = 7.204e-35
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 2
Query:  536 QSSRIKGQPMSKNWGQNW*T 595
            + +R +   M KNWGQ W T
Sbjct:  249 KGTRTQWIAMKKNWGQIWST 268          
The following BLAST results are available for this feature:
BLAST of EY710274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
EXP23_ARATH5.730e-3846.25Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=... [more]
EXPA6_ORYSJ3.330e-3742.56Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP25_ARATH3.648e-3745.63Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=... [more]
EXP13_ORYSJ2.819e-3643.37Expansin-A13 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP28_ORYSJ5.141e-3640.44Expansin-A28 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP22_ORYSJ1.134e-3543.29Expansin-A22 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP26_ARATH3.266e-3543.13Putative expansin-A26 OS=Arabidopsis thaliana GN=E... [more]
EXP22_ARATH4.256e-3543.13Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=... [more]
EXPA8_ORYSJ5.552e-3546.71Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP24_ARATH7.204e-3546.01Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-A02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710274 ID=EY710274; Name=EY710274; organism=Citrus sinensis; type=EST; length=1036bp
CCACGCGTCCGGCTCTTTGAGTGATTCTTTGTGTTGGGTTTCTCTCATTG
GTCTCATCCGTTCAAGGTTATGGAGGTTGGATTAATGCTCATGCAACTTT
CTATGGAGGTGGTGATGCTTCTGGCACAATGGGGGGCGCTTGTGGGTACG
GCAATTTGTACAGCCAAGGTTATGGTACTAATACCGCAGCACTTAACACT
GCTTTGTTCAACAATGGCCTAAGTTGTGGAGCTTGCTTTCAAATTATGTG
CGCTAATGACCCGCAATGGTGCCTGCGTGGCTCCATCATTGTCACTGCCA
CTAACTTTTGCCCTCCTGGAGGCTGGTGTGATCCTCCTAACCACCACTTT
GATCTCTCTCAGCCTGTCTTCCAACACATTGCCCAGTATAGAGCTGGTAA
TGTTCCTGTAATCTACAGAAGGGTGAAATGCAAGATAAATGGGGGAAATA
AGTTCACAATCAATGGTCATTCTTACTTCAATTTAATTCTAATAACAAAC
GTGGGTAGAGCTAGTGAAGTGCGTGCTGCATCCATCAAAGTTCAAGGATT
AAAGGGCAACCGATGTCAAAAAACTGGGGCCAAAACTGGTAAACACATCA
GATTTAATAGACAAAGCCAATTTTAGATGTAACCACAGAAAAGCCAAAAG
GTTGATCTATAAAAGTTCCACCTACAATGGGCATTTGAGAAACATATCAG
GAAGAAAATCAAAAATAAGGATAATTAAGTAAAGAAGCAACGCATTATAA
ATTATAATACCTCAACAAAGGGGGGGGAAATAATATCCTGATTGGCCCAT
AGGCTAAAACAATATCAAAAGAGTGCAATATATTTTATATTTAAATTAAG
AACATAGAGGTAAAAAAAAATTAAAAAATTGTTAAAAAATGACAATAAAA
GATGAGTAATGATGATAGAAGAATTTCATAACTTAAATGTGAGTAGAAGA
ATTAAACATAAATAATAAAAACATAATAAAAAACAAAATAAACAAGCTGA
TAATATATCAAACAATATGCACTCATTAAATGACCA
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