EY710274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 7.218e-35 Identity = 71/164 (43.29%), Postives = 91/164 (55.49%), Query Frame = 3 Query: 78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCAND--PQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASI 536 W+ AHATFY Y +LYSQ SCG C++I C PQWC G ++ VTATNFCPP GGWC+PP HFD++QP ++ I YRAG +PV+Y+RV C GG +FTINGH YFNL+L+TNV +++ I Sbjct: 50 WLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTVTATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDI 213 HSP 2 Score: 24.2534 bits (51), Expect = 7.218e-35 Identity = 7/10 (70.00%), Postives = 8/10 (80.00%), Query Frame = 2 Query: 560 PMSKNWGQNW 589 PM +NWG NW Sbjct: 223 PMVRNWGANW 232
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 7.224e-35 Identity = 71/164 (43.29%), Postives = 90/164 (54.88%), Query Frame = 3 Query: 78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCAND--PQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASI 536 W AHATFY YGNLYSQ SCG C++I C PQWC G ++ +TATNFCPP GGWC+PP HFD++QP ++ I Y AG +PVIY+RV C GG +FTINGH YF L+L+TNV A +++ + Sbjct: 39 WQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEV 202 HSP 2 Score: 23.0978 bits (48), Expect = 7.224e-35 Identity = 6/10 (60.00%), Postives = 8/10 (80.00%), Query Frame = 2 Query: 560 PMSKNWGQNW 589 PM++NWG W Sbjct: 212 PMARNWGAQW 221
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 9.411e-35 Identity = 71/164 (43.29%), Postives = 90/164 (54.88%), Query Frame = 3 Query: 78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCAND--PQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASI 536 W AHATFY YG+LYSQ SCG C++I C PQWC G ++ +TATNFCPP GGWC+PP HFD++QP ++ I Y AG +PVIY+RV C GG +FTINGH YFNL+L+TNV +++ I Sbjct: 34 WQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDI 197 HSP 2 Score: 24.2534 bits (51), Expect = 9.411e-35 Identity = 7/10 (70.00%), Postives = 8/10 (80.00%), Query Frame = 2 Query: 560 PMSKNWGQNW 589 PM +NWG NW Sbjct: 207 PMVRNWGANW 216
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.016e-33 Identity = 71/166 (42.77%), Postives = 92/166 (55.42%), Query Frame = 3 Query: 75 GWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 G N HATFY YG+LYS SCG C++I C A D +WCL+G S+++TATNFCPP GGWC+PP HFD++QP ++ I YR G VPV+++RV C GG +F ING YF L+ I NVG A +++ SIK Sbjct: 25 GLTNGHATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKGASVVITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVSIK 190 HSP 2 Score: 23.8682 bits (50), Expect = 1.016e-33 Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 2 Query: 563 MSKNWGQNW 589 MS+NWG NW Sbjct: 199 MSRNWGANW 207
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 2.243e-33 Identity = 69/166 (41.57%), Postives = 88/166 (53.01%), Query Frame = 3 Query: 75 GWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 GW ATFY YGNLY+Q SCG C+ + C DP+WC G S+ VTATNFCPP GGWC+PP HFD++QP ++ I YR G VPV +RRV C+ GG +FT+ G YF L+L+TNV A VR+ ++ Sbjct: 33 GWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAGASVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVR 198 HSP 2 Score: 23.8682 bits (50), Expect = 2.243e-33 Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 2 Query: 563 MSKNWGQNW 589 MS+NWG NW Sbjct: 209 MSRNWGANW 217
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 3.808e-33 Identity = 73/187 (39.04%), Postives = 98/187 (52.41%), Query Frame = 3 Query: 21 VILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDP--QWCL-RGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIKVQG 548 ++LC L+ ++ WI A ATFY YGNLY Q +CG C+ I+C D +WC RG++ VTATN CPP GGWC+PP HFD+SQP ++ I YRAG VPV+YRRV+C GG +FT+ G +F L+L+ NV + V A S++ G Sbjct: 9 LVLCT-ILAARMALAAADDWIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRGAVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAG 194 HSP 2 Score: 23.8682 bits (50), Expect = 3.808e-33 Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 2 Query: 563 MSKNWGQNW 589 MS+NWG NW Sbjct: 200 MSRNWGANW 208
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 4.954e-33 Identity = 66/166 (39.76%), Postives = 87/166 (52.41%), Query Frame = 3 Query: 72 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 G W AHATFY Y + + CGAC+++ C + P C G+ ++VTATN CPP GGWC+PP HFDLS P F IAQ +AG VP+ YRRV C GG ++TI G+ YFNL++++NVG A +V S+K Sbjct: 40 GPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVK 205 HSP 2 Score: 30.0314 bits (66), Expect = 4.954e-33 Identity = 9/22 (40.91%), Postives = 15/22 (68.18%), Query Frame = 2 Query: 539 SSRIKGQPMSKNWGQNW*THQI 604 + R+K P+ +NWGQ W T ++ Sbjct: 207 NKRVKWTPLKRNWGQEWQTSEV 228
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 6.457e-33 Identity = 73/182 (40.11%), Postives = 97/182 (53.30%), Query Frame = 3 Query: 27 LCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC--ANDPQWCLRGSII-VTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 LC+ ++ ++ W A ATFY YGNLY Q SCG C+ I+C + PQWC G+ + VTATN CPP GGWC+PP HFD+SQP ++ I Y+AG VPV+Y+RV+C GG +FT+ G +YF L+LITNV + V +A IK Sbjct: 11 LCLAVVAACAAGGAVADWSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIK 192 HSP 2 Score: 23.8682 bits (50), Expect = 6.457e-33 Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 2 Query: 563 MSKNWGQNW 589 MS+NWG NW Sbjct: 201 MSRNWGANW 209
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 9.061e-32 Identity = 67/190 (35.26%), Postives = 100/190 (52.63%), Query Frame = 3 Query: 3 TRPAL*VILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCAN--DPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 T L +++ + SL++ GW + ATFY YGNLY SCG C+QI C + +P+WCL+G ++ +T TN CPP GGWC+PP HFD+++P + I Y+AG VPV+Y+RV C GG +FT+ G +YF L+LI+NV + +++ +K Sbjct: 9 TPSILPLVVVIAAASLIAPTTA--GWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVK 196 HSP 2 Score: 28.1054 bits (61), Expect = 9.061e-32 Identity = 12/26 (46.15%), Postives = 16/26 (61.54%), Query Frame = 2 Query: 536 QSSRIKG-----QPMSKNWGQNW*TH 598 QS +KG P+S+NWG NW +H Sbjct: 191 QSVWVKGPNTDRMPLSRNWGANWQSH 216
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 9.383e-32 Identity = 83/220 (37.73%), Postives = 110/220 (50.00%), Query Frame = 3 Query: 24 ILCVGFLSL--VSSVQGYGG--WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC-ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIKVQGLK--------GNRCQKTGAKTGKHIRFNRQS 617 +L V FLSL S ++G W +A ATFY YGN+YS SCGAC+ + C A+ +WC G S+ VTATN+CPP GGWC+PP HFD+SQP ++ IA Y +G VPV Y R C+ GG +F I GH Y+ L+L+TNV + V AA +K G + G Q TG+ + F Q+ Sbjct: 5 LLVVLFLSLCCASRLRGEAAQQWTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQA 224 The following BLAST results are available for this feature:
BLAST of EY710274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710274 ID=EY710274; Name=EY710274; organism=Citrus sinensis; type=EST; length=1036bpback to top |