EY710274

Overview
NameEY710274
Unique NameEY710274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1036
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 7.218e-35
Identity = 71/164 (43.29%), Postives = 91/164 (55.49%), Query Frame = 3
Query:   78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCAND--PQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASI 536
            W+ AHATFY              Y +LYSQ                  SCG C++I C     PQWC  G ++ VTATNFCPP        GGWC+PP  HFD++QP ++ I  YRAG +PV+Y+RV C   GG +FTINGH YFNL+L+TNV     +++  I
Sbjct:   50 WLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTVTATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDI 213          

HSP 2 Score: 24.2534 bits (51), Expect = 7.218e-35
Identity = 7/10 (70.00%), Postives = 8/10 (80.00%), Query Frame = 2
Query:  560 PMSKNWGQNW 589
            PM +NWG NW
Sbjct:  223 PMVRNWGANW 232          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 7.224e-35
Identity = 71/164 (43.29%), Postives = 90/164 (54.88%), Query Frame = 3
Query:   78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCAND--PQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASI 536
            W  AHATFY              YGNLYSQ                  SCG C++I C     PQWC  G ++ +TATNFCPP        GGWC+PP  HFD++QP ++ I  Y AG +PVIY+RV C   GG +FTINGH YF L+L+TNV  A  +++  +
Sbjct:   39 WQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEV 202          

HSP 2 Score: 23.0978 bits (48), Expect = 7.224e-35
Identity = 6/10 (60.00%), Postives = 8/10 (80.00%), Query Frame = 2
Query:  560 PMSKNWGQNW 589
            PM++NWG  W
Sbjct:  212 PMARNWGAQW 221          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 9.411e-35
Identity = 71/164 (43.29%), Postives = 90/164 (54.88%), Query Frame = 3
Query:   78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCAND--PQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASI 536
            W  AHATFY              YG+LYSQ                  SCG C++I C     PQWC  G ++ +TATNFCPP        GGWC+PP  HFD++QP ++ I  Y AG +PVIY+RV C   GG +FTINGH YFNL+L+TNV     +++  I
Sbjct:   34 WQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDI 197          

HSP 2 Score: 24.2534 bits (51), Expect = 9.411e-35
Identity = 7/10 (70.00%), Postives = 8/10 (80.00%), Query Frame = 2
Query:  560 PMSKNWGQNW 589
            PM +NWG NW
Sbjct:  207 PMVRNWGANW 216          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.016e-33
Identity = 71/166 (42.77%), Postives = 92/166 (55.42%), Query Frame = 3
Query:   75 GWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            G  N HATFY              YG+LYS                   SCG C++I C  A D +WCL+G S+++TATNFCPP        GGWC+PP  HFD++QP ++ I  YR G VPV+++RV C   GG +F ING  YF L+ I NVG A  +++ SIK
Sbjct:   25 GLTNGHATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKGASVVITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVSIK 190          

HSP 2 Score: 23.8682 bits (50), Expect = 1.016e-33
Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 2
Query:  563 MSKNWGQNW 589
            MS+NWG NW
Sbjct:  199 MSRNWGANW 207          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 2.243e-33
Identity = 69/166 (41.57%), Postives = 88/166 (53.01%), Query Frame = 3
Query:   75 GWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            GW    ATFY              YGNLY+Q                  SCG C+ + C    DP+WC  G S+ VTATNFCPP        GGWC+PP  HFD++QP ++ I  YR G VPV +RRV C+  GG +FT+ G  YF L+L+TNV  A  VR+  ++
Sbjct:   33 GWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAGASVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVR 198          

HSP 2 Score: 23.8682 bits (50), Expect = 2.243e-33
Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 2
Query:  563 MSKNWGQNW 589
            MS+NWG NW
Sbjct:  209 MSRNWGANW 217          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 3.808e-33
Identity = 73/187 (39.04%), Postives = 98/187 (52.41%), Query Frame = 3
Query:   21 VILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDP--QWCL-RGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIKVQG 548
            ++LC   L+   ++     WI A ATFY              YGNLY Q                  +CG C+ I+C  D   +WC  RG++ VTATN CPP        GGWC+PP  HFD+SQP ++ I  YRAG VPV+YRRV+C   GG +FT+ G  +F L+L+ NV  +  V A S++  G
Sbjct:    9 LVLCT-ILAARMALAAADDWIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRGAVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAG 194          

HSP 2 Score: 23.8682 bits (50), Expect = 3.808e-33
Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 2
Query:  563 MSKNWGQNW 589
            MS+NWG NW
Sbjct:  200 MSRNWGANW 208          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.954e-33
Identity = 66/166 (39.76%), Postives = 87/166 (52.41%), Query Frame = 3
Query:   72 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            G W  AHATFY              Y +   +                   CGAC+++ C + P  C  G+  ++VTATN CPP        GGWC+PP  HFDLS P F  IAQ +AG VP+ YRRV C   GG ++TI G+ YFNL++++NVG A +V   S+K
Sbjct:   40 GPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVK 205          

HSP 2 Score: 30.0314 bits (66), Expect = 4.954e-33
Identity = 9/22 (40.91%), Postives = 15/22 (68.18%), Query Frame = 2
Query:  539 SSRIKGQPMSKNWGQNW*THQI 604
            + R+K  P+ +NWGQ W T ++
Sbjct:  207 NKRVKWTPLKRNWGQEWQTSEV 228          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 6.457e-33
Identity = 73/182 (40.11%), Postives = 97/182 (53.30%), Query Frame = 3
Query:   27 LCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC--ANDPQWCLRGSII-VTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            LC+  ++  ++      W  A ATFY              YGNLY Q                  SCG C+ I+C  +  PQWC  G+ + VTATN CPP        GGWC+PP  HFD+SQP ++ I  Y+AG VPV+Y+RV+C   GG +FT+ G +YF L+LITNV  +  V +A IK
Sbjct:   11 LCLAVVAACAAGGAVADWSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIK 192          

HSP 2 Score: 23.8682 bits (50), Expect = 6.457e-33
Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 2
Query:  563 MSKNWGQNW 589
            MS+NWG NW
Sbjct:  201 MSRNWGANW 209          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 9.061e-32
Identity = 67/190 (35.26%), Postives = 100/190 (52.63%), Query Frame = 3
Query:    3 TRPAL*VILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCAN--DPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            T   L +++ +   SL++      GW +  ATFY              YGNLY                    SCG C+QI C +  +P+WCL+G ++ +T TN CPP        GGWC+PP  HFD+++P +  I  Y+AG VPV+Y+RV C   GG +FT+ G +YF L+LI+NV  +  +++  +K
Sbjct:    9 TPSILPLVVVIAAASLIAPTTA--GWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVK 196          

HSP 2 Score: 28.1054 bits (61), Expect = 9.061e-32
Identity = 12/26 (46.15%), Postives = 16/26 (61.54%), Query Frame = 2
Query:  536 QSSRIKG-----QPMSKNWGQNW*TH 598
            QS  +KG      P+S+NWG NW +H
Sbjct:  191 QSVWVKGPNTDRMPLSRNWGANWQSH 216          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 9.383e-32
Identity = 83/220 (37.73%), Postives = 110/220 (50.00%), Query Frame = 3
Query:   24 ILCVGFLSL--VSSVQGYGG--WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC-ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIKVQGLK--------GNRCQKTGAKTGKHIRFNRQS 617
            +L V FLSL   S ++G     W +A ATFY              YGN+YS                   SCGAC+ + C A+  +WC  G S+ VTATN+CPP        GGWC+PP  HFD+SQP ++ IA Y +G VPV Y R  C+  GG +F I GH Y+ L+L+TNV  +  V AA +K  G +        G   Q     TG+ + F  Q+
Sbjct:    5 LLVVLFLSLCCASRLRGEAAQQWTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQA 224          
The following BLAST results are available for this feature:
BLAST of EY710274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
EXP24_ORYSJ7.218e-3543.29Expansin-A24 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP23_ORYSJ7.224e-3543.29Expansin-A23 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP14_ORYSJ9.411e-3543.29Expansin-A14 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP11_ARATH1.016e-3342.77Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=... [more]
EXP29_ORYSJ2.243e-3341.57Expansin-A29 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP27_ORYSJ3.808e-3339.04Putative expansin-A27 OS=Oryza sativa subsp. japon... [more]
EXP32_ORYSJ4.954e-3339.76Expansin-A32 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP31_ORYSJ6.457e-3340.11Expansin-A31 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP15_ORYSJ9.061e-3235.26Expansin-A15 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA9_ORYSJ9.383e-3237.73Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXP... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-A02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710274 ID=EY710274; Name=EY710274; organism=Citrus sinensis; type=EST; length=1036bp
CCACGCGTCCGGCTCTTTGAGTGATTCTTTGTGTTGGGTTTCTCTCATTG
GTCTCATCCGTTCAAGGTTATGGAGGTTGGATTAATGCTCATGCAACTTT
CTATGGAGGTGGTGATGCTTCTGGCACAATGGGGGGCGCTTGTGGGTACG
GCAATTTGTACAGCCAAGGTTATGGTACTAATACCGCAGCACTTAACACT
GCTTTGTTCAACAATGGCCTAAGTTGTGGAGCTTGCTTTCAAATTATGTG
CGCTAATGACCCGCAATGGTGCCTGCGTGGCTCCATCATTGTCACTGCCA
CTAACTTTTGCCCTCCTGGAGGCTGGTGTGATCCTCCTAACCACCACTTT
GATCTCTCTCAGCCTGTCTTCCAACACATTGCCCAGTATAGAGCTGGTAA
TGTTCCTGTAATCTACAGAAGGGTGAAATGCAAGATAAATGGGGGAAATA
AGTTCACAATCAATGGTCATTCTTACTTCAATTTAATTCTAATAACAAAC
GTGGGTAGAGCTAGTGAAGTGCGTGCTGCATCCATCAAAGTTCAAGGATT
AAAGGGCAACCGATGTCAAAAAACTGGGGCCAAAACTGGTAAACACATCA
GATTTAATAGACAAAGCCAATTTTAGATGTAACCACAGAAAAGCCAAAAG
GTTGATCTATAAAAGTTCCACCTACAATGGGCATTTGAGAAACATATCAG
GAAGAAAATCAAAAATAAGGATAATTAAGTAAAGAAGCAACGCATTATAA
ATTATAATACCTCAACAAAGGGGGGGGAAATAATATCCTGATTGGCCCAT
AGGCTAAAACAATATCAAAAGAGTGCAATATATTTTATATTTAAATTAAG
AACATAGAGGTAAAAAAAAATTAAAAAATTGTTAAAAAATGACAATAAAA
GATGAGTAATGATGATAGAAGAATTTCATAACTTAAATGTGAGTAGAAGA
ATTAAACATAAATAATAAAAACATAATAAAAAACAAAATAAACAAGCTGA
TAATATATCAAACAATATGCACTCATTAAATGACCA
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