EY710274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.181e-31 Identity = 79/186 (42.47%), Postives = 97/186 (52.15%), Query Frame = 3 Query: 21 VILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC--ANDPQWCLRGSII-VTATNFCPPG---GWCDPPNHHFDLSQPVFQHIAQY-RAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIKVQGLKG 557 VIL V LS+ G WI AHAT+Y Y N Y SCG C+Q+ C DP+WCLRG+ + VTATNFCP GWC+ P HHFD+S P F IA+ G VPV YRRV CK GG +FT+ G FN+++I+NVG VR S+ V+G KG Sbjct: 11 VILLVSTLSVGMCSNG---WIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFCPTNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVR--SVAVRGSKG 191 HSP 2 Score: 22.7126 bits (47), Expect = 1.181e-31 Identity = 6/9 (66.67%), Postives = 8/9 (88.89%), Query Frame = 2 Query: 563 MSKNWGQNW 589 M++NWG NW Sbjct: 197 MTRNWGANW 205
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.181e-31 Identity = 67/163 (41.10%), Postives = 89/163 (54.60%), Query Frame = 3 Query: 81 INAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC-ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 ++ ATFY YGNLYS +CG C+QI C ++ +WC G S+ +TATN CPP GGWC+PP HFD++QP ++ I YR G VPV ++RV C GG +FTING+SYF L+LITNVG +++ IK Sbjct: 25 LSGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGTSVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIK 187 HSP 2 Score: 24.2534 bits (51), Expect = 1.181e-31 Identity = 11/23 (47.83%), Postives = 14/23 (60.87%), Query Frame = 2 Query: 536 QSSRIKGQP-----MSKNWGQNW 589 +S +IKG MS+NWG NW Sbjct: 182 KSVQIKGTKTGWVTMSRNWGANW 204
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 2.001e-31 Identity = 71/189 (37.57%), Postives = 98/189 (51.85%), Query Frame = 3 Query: 30 CVGFLSLVSSVQGYG--------GWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 C FL+L+++ + GW A ATFY YG+LYS SCG C++IMC D ++C+ G S+ +TATN CPP GGWC+PP HFD+++P + I Y G VPV+Y+RV C GG +FTING YF L+L++NVG +++ SIK Sbjct: 10 CARFLALLATCLLWNEAASFTASGWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGTSVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIK 198 HSP 2 Score: 25.0238 bits (53), Expect = 2.001e-31 Identity = 9/18 (50.00%), Postives = 11/18 (61.11%), Query Frame = 2 Query: 536 QSSRIKGQPMSKNWGQNW 589 + SR MS+NWG NW Sbjct: 198 KGSRTGWMAMSRNWGVNW 215
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 3.395e-31 Identity = 69/163 (42.33%), Postives = 89/163 (54.60%), Query Frame = 3 Query: 84 NAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC-ANDPQWCLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 +A ATFY YGNLY+ CGAC+ I C + +WC G SI +TATN CPP GGWC+PP HFD+SQP +++IA Y+AG VPV Y+RV C+ +GG +F I+GH YF L+ +TNVG + V SIK Sbjct: 30 SAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIK 192 HSP 2 Score: 23.8682 bits (50), Expect = 3.395e-31 Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 2 Query: 563 MSKNWGQNW 589 MS+NWG NW Sbjct: 201 MSRNWGANW 209
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.037e-30 Identity = 67/171 (39.18%), Postives = 90/171 (52.63%), Query Frame = 3 Query: 60 VQGY---GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 V GY G W AHATFY YGNL++ CG CFQI C+ P S +VTATN CPP GGWC+PP HFD+++P F +A +RAG +PV YRRV C+ +GG +F G+SY+ LI + NVG A ++++ ++K Sbjct: 28 VAGYYRPGPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVK 198
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.655e-30 Identity = 67/187 (35.83%), Postives = 97/187 (51.87%), Query Frame = 3 Query: 21 VILCVGFLSLVSSVQGYG---GWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC--ANDPQWCLRGSII-VTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 ++ + V + G+ GW ATFY YGNLY+ SCG C+ IMC A PQWC G+ + +TATN CPP GGWC+PP HFD+++P + I Y+AG +PV+Y++VKC GG +FT+ G ++F L+L++NV + VR+ S+K Sbjct: 5 ILFATSLVITVLAASGFAPAHGWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVK 191 HSP 2 Score: 21.557 bits (44), Expect = 1.655e-30 Identity = 5/9 (55.56%), Postives = 8/9 (88.89%), Query Frame = 2 Query: 563 MSKNWGQNW 589 +++NWG NW Sbjct: 200 LNRNWGANW 208
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 2.157e-30 Identity = 68/164 (41.46%), Postives = 85/164 (51.83%), Query Frame = 3 Query: 78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC-ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 W A ATFY YGNLY+ CGAC+ I C + WC G SI +TATN CPP GGWC+PP HFD+SQP + IA Y+AG VPV ++RV C+ +GG +FTI+G YF L+ + NVG + V SIK Sbjct: 23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIK 186 HSP 2 Score: 26.9498 bits (58), Expect = 2.157e-30 Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 2 Query: 536 QSSRIKGQPMSKNWGQNW 589 + S+ MS+NWGQNW Sbjct: 186 KGSKTDWMAMSRNWGQNW 203
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.782e-29 Identity = 63/163 (38.65%), Postives = 88/163 (53.99%), Query Frame = 3 Query: 78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPP------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 W+ ATFY YGNLY Q SCG C+ I+C + P WC G +I VT TN+CPP GGWC+ HFD+SQP +++I Y AG +P++Y++VKC GG +FTING +YF L+L+TN+ + + + S+K Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYCPPNYDLPYGGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVK 185 HSP 2 Score: 22.7126 bits (47), Expect = 1.782e-29 Identity = 6/9 (66.67%), Postives = 8/9 (88.89%), Query Frame = 2 Query: 563 MSKNWGQNW 589 M++NWG NW Sbjct: 194 MTRNWGANW 202
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 1.782e-29 Identity = 65/164 (39.63%), Postives = 88/164 (53.66%), Query Frame = 3 Query: 75 GWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCAND--PQWCLRGSII-VTATNFCPP------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 GW+ ATFY YGNLY Q SCG C+ I+C D P C G+ I VT TNFCPP GGWC+ HFD+SQP +++I Y AG VP++Y++VKC +GG +FTI G +YF L+L+TN+ + + + S+K Sbjct: 22 GWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGTAITVTGTNFCPPNYDLPYGGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVK 185 HSP 2 Score: 23.8682 bits (50), Expect = 1.782e-29 Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 2 Query: 563 MSKNWGQNW 589 MS+NWG NW Sbjct: 194 MSRNWGANW 202
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.491e-28 Identity = 62/163 (38.04%), Postives = 84/163 (51.53%), Query Frame = 3 Query: 78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 W A AT+Y YG+L CGACF++ C +D +WC+ G SII+TATNFC P GG C+PPN HF L F+ IA ++AGN+PV YRR+ C+ G +FT++G F +LITNV + ++ A IK Sbjct: 40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIK 202 HSP 2 Score: 28.4906 bits (62), Expect = 2.491e-28 Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 2 Query: 536 QSSRIKGQPMSKNWGQNW 589 + SR PM +NWGQNW Sbjct: 202 KGSRTGWLPMGRNWGQNW 219 The following BLAST results are available for this feature:
BLAST of EY710274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710274 ID=EY710274; Name=EY710274; organism=Citrus sinensis; type=EST; length=1036bpback to top |