EY710274

Overview
NameEY710274
Unique NameEY710274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1036
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.181e-31
Identity = 79/186 (42.47%), Postives = 97/186 (52.15%), Query Frame = 3
Query:   21 VILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC--ANDPQWCLRGSII-VTATNFCPPG---GWCDPPNHHFDLSQPVFQHIAQY-RAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIKVQGLKG 557
            VIL V  LS+     G   WI AHAT+Y              Y N Y                    SCG C+Q+ C    DP+WCLRG+ + VTATNFCP     GWC+ P HHFD+S P F  IA+    G VPV YRRV CK  GG +FT+ G   FN+++I+NVG    VR  S+ V+G KG
Sbjct:   11 VILLVSTLSVGMCSNG---WIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFCPTNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVR--SVAVRGSKG 191          

HSP 2 Score: 22.7126 bits (47), Expect = 1.181e-31
Identity = 6/9 (66.67%), Postives = 8/9 (88.89%), Query Frame = 2
Query:  563 MSKNWGQNW 589
            M++NWG NW
Sbjct:  197 MTRNWGANW 205          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.181e-31
Identity = 67/163 (41.10%), Postives = 89/163 (54.60%), Query Frame = 3
Query:   81 INAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC-ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            ++  ATFY              YGNLYS                   +CG C+QI C  ++ +WC  G S+ +TATN CPP        GGWC+PP  HFD++QP ++ I  YR G VPV ++RV C   GG +FTING+SYF L+LITNVG    +++  IK
Sbjct:   25 LSGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGTSVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIK 187          

HSP 2 Score: 24.2534 bits (51), Expect = 1.181e-31
Identity = 11/23 (47.83%), Postives = 14/23 (60.87%), Query Frame = 2
Query:  536 QSSRIKGQP-----MSKNWGQNW 589
            +S +IKG       MS+NWG NW
Sbjct:  182 KSVQIKGTKTGWVTMSRNWGANW 204          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.001e-31
Identity = 71/189 (37.57%), Postives = 98/189 (51.85%), Query Frame = 3
Query:   30 CVGFLSLVSSVQGYG--------GWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            C  FL+L+++   +         GW  A ATFY              YG+LYS                   SCG C++IMC    D ++C+ G S+ +TATN CPP        GGWC+PP  HFD+++P +  I  Y  G VPV+Y+RV C   GG +FTING  YF L+L++NVG    +++ SIK
Sbjct:   10 CARFLALLATCLLWNEAASFTASGWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGTSVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIK 198          

HSP 2 Score: 25.0238 bits (53), Expect = 2.001e-31
Identity = 9/18 (50.00%), Postives = 11/18 (61.11%), Query Frame = 2
Query:  536 QSSRIKGQPMSKNWGQNW 589
            + SR     MS+NWG NW
Sbjct:  198 KGSRTGWMAMSRNWGVNW 215          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 3.395e-31
Identity = 69/163 (42.33%), Postives = 89/163 (54.60%), Query Frame = 3
Query:   84 NAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC-ANDPQWCLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            +A ATFY              YGNLY+                    CGAC+ I C  +  +WC  G  SI +TATN CPP        GGWC+PP  HFD+SQP +++IA Y+AG VPV Y+RV C+ +GG +F I+GH YF L+ +TNVG +  V   SIK
Sbjct:   30 SAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIK 192          

HSP 2 Score: 23.8682 bits (50), Expect = 3.395e-31
Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 2
Query:  563 MSKNWGQNW 589
            MS+NWG NW
Sbjct:  201 MSRNWGANW 209          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.037e-30
Identity = 67/171 (39.18%), Postives = 90/171 (52.63%), Query Frame = 3
Query:   60 VQGY---GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            V GY   G W  AHATFY              YGNL++                    CG CFQI C+  P      S +VTATN CPP        GGWC+PP  HFD+++P F  +A +RAG +PV YRRV C+ +GG +F   G+SY+ LI + NVG A ++++ ++K
Sbjct:   28 VAGYYRPGPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVK 198          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.655e-30
Identity = 67/187 (35.83%), Postives = 97/187 (51.87%), Query Frame = 3
Query:   21 VILCVGFLSLVSSVQGYG---GWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC--ANDPQWCLRGSII-VTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            ++     +  V +  G+    GW    ATFY              YGNLY+                   SCG C+ IMC  A  PQWC  G+ + +TATN CPP        GGWC+PP  HFD+++P +  I  Y+AG +PV+Y++VKC   GG +FT+ G ++F L+L++NV  +  VR+ S+K
Sbjct:    5 ILFATSLVITVLAASGFAPAHGWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVK 191          

HSP 2 Score: 21.557 bits (44), Expect = 1.655e-30
Identity = 5/9 (55.56%), Postives = 8/9 (88.89%), Query Frame = 2
Query:  563 MSKNWGQNW 589
            +++NWG NW
Sbjct:  200 LNRNWGANW 208          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.157e-30
Identity = 68/164 (41.46%), Postives = 85/164 (51.83%), Query Frame = 3
Query:   78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC-ANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            W  A ATFY              YGNLY+                    CGAC+ I C  +   WC  G SI +TATN CPP        GGWC+PP  HFD+SQP +  IA Y+AG VPV ++RV C+ +GG +FTI+G  YF L+ + NVG +  V   SIK
Sbjct:   23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIK 186          

HSP 2 Score: 26.9498 bits (58), Expect = 2.157e-30
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  536 QSSRIKGQPMSKNWGQNW 589
            + S+     MS+NWGQNW
Sbjct:  186 KGSKTDWMAMSRNWGQNW 203          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.782e-29
Identity = 63/163 (38.65%), Postives = 88/163 (53.99%), Query Frame = 3
Query:   78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPP------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            W+   ATFY              YGNLY Q                  SCG C+ I+C  +  P WC  G +I VT TN+CPP      GGWC+    HFD+SQP +++I  Y AG +P++Y++VKC   GG +FTING +YF L+L+TN+  +  + + S+K
Sbjct:   23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYCPPNYDLPYGGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVK 185          

HSP 2 Score: 22.7126 bits (47), Expect = 1.782e-29
Identity = 6/9 (66.67%), Postives = 8/9 (88.89%), Query Frame = 2
Query:  563 MSKNWGQNW 589
            M++NWG NW
Sbjct:  194 MTRNWGANW 202          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 1.782e-29
Identity = 65/164 (39.63%), Postives = 88/164 (53.66%), Query Frame = 3
Query:   75 GWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCAND--PQWCLRGSII-VTATNFCPP------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            GW+   ATFY              YGNLY Q                  SCG C+ I+C  D  P  C  G+ I VT TNFCPP      GGWC+    HFD+SQP +++I  Y AG VP++Y++VKC  +GG +FTI G +YF L+L+TN+  +  + + S+K
Sbjct:   22 GWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGTAITVTGTNFCPPNYDLPYGGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVK 185          

HSP 2 Score: 23.8682 bits (50), Expect = 1.782e-29
Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 2
Query:  563 MSKNWGQNW 589
            MS+NWG NW
Sbjct:  194 MSRNWGANW 202          
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.491e-28
Identity = 62/163 (38.04%), Postives = 84/163 (51.53%), Query Frame = 3
Query:   78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539
            W  A AT+Y              YG+L                      CGACF++ C +D +WC+ G SII+TATNFC P        GG C+PPN HF L    F+ IA ++AGN+PV YRR+ C+  G  +FT++G   F  +LITNV  + ++ A  IK
Sbjct:   40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIK 202          

HSP 2 Score: 28.4906 bits (62), Expect = 2.491e-28
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  536 QSSRIKGQPMSKNWGQNW 589
            + SR    PM +NWGQNW
Sbjct:  202 KGSRTGWLPMGRNWGQNW 219          
The following BLAST results are available for this feature:
BLAST of EY710274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
EXP12_ARATH1.181e-3142.47Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=... [more]
EXP12_ORYSJ1.181e-3141.10Expansin-A12 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA1_ORYSJ2.001e-3137.57Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA3_ORYSJ3.395e-3142.33Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA7_ARATH1.037e-3039.18Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 ... [more]
EXP25_ORYSJ1.655e-3035.83Expansin-A25 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP33_ORYSJ2.157e-3041.46Expansin-A33 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP19_ORYSJ1.782e-2938.65Expansin-A19 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP18_ORYSJ1.782e-2939.63Expansin-A18 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP13_ARATH2.491e-2838.04Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-097-A02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710274 ID=EY710274; Name=EY710274; organism=Citrus sinensis; type=EST; length=1036bp
CCACGCGTCCGGCTCTTTGAGTGATTCTTTGTGTTGGGTTTCTCTCATTG
GTCTCATCCGTTCAAGGTTATGGAGGTTGGATTAATGCTCATGCAACTTT
CTATGGAGGTGGTGATGCTTCTGGCACAATGGGGGGCGCTTGTGGGTACG
GCAATTTGTACAGCCAAGGTTATGGTACTAATACCGCAGCACTTAACACT
GCTTTGTTCAACAATGGCCTAAGTTGTGGAGCTTGCTTTCAAATTATGTG
CGCTAATGACCCGCAATGGTGCCTGCGTGGCTCCATCATTGTCACTGCCA
CTAACTTTTGCCCTCCTGGAGGCTGGTGTGATCCTCCTAACCACCACTTT
GATCTCTCTCAGCCTGTCTTCCAACACATTGCCCAGTATAGAGCTGGTAA
TGTTCCTGTAATCTACAGAAGGGTGAAATGCAAGATAAATGGGGGAAATA
AGTTCACAATCAATGGTCATTCTTACTTCAATTTAATTCTAATAACAAAC
GTGGGTAGAGCTAGTGAAGTGCGTGCTGCATCCATCAAAGTTCAAGGATT
AAAGGGCAACCGATGTCAAAAAACTGGGGCCAAAACTGGTAAACACATCA
GATTTAATAGACAAAGCCAATTTTAGATGTAACCACAGAAAAGCCAAAAG
GTTGATCTATAAAAGTTCCACCTACAATGGGCATTTGAGAAACATATCAG
GAAGAAAATCAAAAATAAGGATAATTAAGTAAAGAAGCAACGCATTATAA
ATTATAATACCTCAACAAAGGGGGGGGAAATAATATCCTGATTGGCCCAT
AGGCTAAAACAATATCAAAAGAGTGCAATATATTTTATATTTAAATTAAG
AACATAGAGGTAAAAAAAAATTAAAAAATTGTTAAAAAATGACAATAAAA
GATGAGTAATGATGATAGAAGAATTTCATAACTTAAATGTGAGTAGAAGA
ATTAAACATAAATAATAAAAACATAATAAAAAACAAAATAAACAAGCTGA
TAATATATCAAACAATATGCACTCATTAAATGACCA
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