EY710274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 4.819e-28 Identity = 68/186 (36.56%), Postives = 94/186 (50.54%), Query Frame = 3 Query: 30 CVGFLSLVS----SVQGYGG--WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 C+ LS+++ S+ Y G W A ATFY YGN+Y +CG CFQ+ C + P C GS +VTATN CPP GGWC+PP HFDL++P F IA ++AG +PV YRRV CK GG +F G+ Y+ L+ + NVG +++ ++K Sbjct: 9 CLVILSMMAMIGTSMATYAGTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVK 193
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.392e-27 Identity = 67/169 (39.64%), Postives = 82/169 (48.52%), Query Frame = 3 Query: 78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP----------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIKVQG 548 W AHATFY YGNLY+ CG C+Q+ C C RGS I VTATN CPP GGWC+PP HFDLS+P F +A +RAG VPV+YRRV C GG +F + G+ Y+ L + NV A +V +K G Sbjct: 37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGG 204
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.689e-27 Identity = 56/119 (47.06%), Postives = 77/119 (64.71%), Query Frame = 3 Query: 222 SCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIKVQG 548 SCGAC ++ C N +WCL+GS ++VTAT+FCPP GGWC+ P H +LS F IA+ RA +P+ YRRVKC GG +F+++G S+F +LI+NVG EV +KV+G Sbjct: 78 SCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEV--VGVKVKG 194 HSP 2 Score: 27.7202 bits (60), Expect = 7.689e-27 Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 2 Query: 560 PMSKNWGQNW 589 PM++NWGQNW Sbjct: 201 PMARNWGQNW 210
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 1.302e-26 Identity = 66/156 (42.31%), Postives = 81/156 (51.92%), Query Frame = 3 Query: 78 WINAHATFYXXXXXXXXXXXXXX-YGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGG-WCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 W +A A +Y YG+L SCGAC++IMC+ +PQ CL GSI +TAT+ CPPG WC PN HFDLS P+F IAQ +A VPV YRRV C GG KF + G+ IL NVG A ++ A S K Sbjct: 45 WYDARAAYYGDIHGGGTELEGACGYGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGSIKITATDLCPPGSAWCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAK 200 HSP 2 Score: 23.8682 bits (50), Expect = 1.302e-26 Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 2 Query: 563 MSKNWGQNW*TH 598 MS+ WGQNW T+ Sbjct: 209 MSRYWGQNWTTN 220
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.822e-25 Identity = 59/157 (37.58%), Postives = 83/157 (52.87%), Query Frame = 3 Query: 78 WINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 W+ ATFY YGNLY Q SCG C+ I+C P WC G +I VT TN+ GGWC+ +FD+SQP +++I Y AG VP++Y++VKC GG +F ING +YF L+L+TN+ + + + S+K Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGKAITVTGTNY---GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVK 176 HSP 2 Score: 22.7126 bits (47), Expect = 1.822e-25 Identity = 6/9 (66.67%), Postives = 8/9 (88.89%), Query Frame = 2 Query: 563 MSKNWGQNW 589 M++NWG NW Sbjct: 185 MTRNWGANW 193
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.367e-25 Identity = 52/116 (44.83%), Postives = 71/116 (61.21%), Query Frame = 3 Query: 222 SCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 +CG C+++ C N WCLRGS ++VTAT+FC P GGWC+ P HF++S+ F +A+ +A VPV +RRV C GG +FTI G + F +LITNV EV A +K Sbjct: 82 ACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVK 197 HSP 2 Score: 28.1054 bits (61), Expect = 2.367e-25 Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 2 Query: 536 QSSRIKGQPMSKNWGQNW 589 + SR PM +NWGQNW Sbjct: 197 KGSRTGWIPMGRNWGQNW 214
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.010e-25 Identity = 55/115 (47.83%), Postives = 77/115 (66.96%), Query Frame = 3 Query: 222 SCGACFQIMCANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 +CG C+++ C +D ++CL G SI+VTATNFC P GG C+PPNHHF L F+ IA ++AG +P+ YRRV C +GG +F + G S+F +LI+NVG A +VR+ IK Sbjct: 80 ACGGCYEVKCVDDLKYCLPGTSIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIK 194 HSP 2 Score: 21.9422 bits (45), Expect = 4.010e-25 Identity = 10/23 (43.48%), Postives = 13/23 (56.52%), Query Frame = 2 Query: 536 QSSRIKGQP-----MSKNWGQNW 589 +S +IKG M +NWGQ W Sbjct: 189 RSVKIKGTESGWLSMGRNWGQIW 211
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 4.987e-25 Identity = 53/118 (44.92%), Postives = 73/118 (61.86%), Query Frame = 3 Query: 225 CGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIKVQG 548 CG C+++ C P WC GS +++T TN CPP GGWC+PP HHFD++ P F +AQ AG VPV YRRV C+ GG +F + G+ Y+ L+ + NVG A +V + S+K G Sbjct: 103 CGQCYELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSG 219
BLAST of EY710274 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.219e-16 Identity = 50/160 (31.25%), Postives = 74/160 (46.25%), Query Frame = 3 Query: 72 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQXXXXXXXXXXXXXXXXXXSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPN----HHFDLSQPVFQHIAQYRAGNVPVIYRRVKCKINGGNKFTINGHSYFNLILITNVGRASEVRAASIK 539 G W++ HATFY G + CGAC+++ + +++VTATN PP P N HFDL+ P F IA+ + G VPV YR+V C GG K+TI G+ +N++++ NVG A +V ++K Sbjct: 80 GPWVDGHATFYGGRDASGTTEGGAC-GYKDADGYGAMTAAVSPALFDNGAGCGACYELKGDSGK------TVVVTATNQAPP-----PVNGMKGEHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVK 227 HSP 2 Score: 25.409 bits (54), Expect = 9.219e-16 Identity = 8/19 (42.11%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 539 SSRIKGQPMSKNWGQNW*T 595 + R+K P+ ++WGQ W T Sbjct: 229 TKRVKWTPLQRSWGQLWKT 247 The following BLAST results are available for this feature:
BLAST of EY710274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710274 ID=EY710274; Name=EY710274; organism=Citrus sinensis; type=EST; length=1036bpback to top |