EY684891

Overview
NameEY684891
Unique NameEY684891
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_DICDI (40S ribosomal protein S8 OS=Dictyostelium discoideum GN=rps8 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.882e-35
Identity = 74/127 (58.27%), Postives = 91/127 (71.65%), Query Frame = 3 
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSN---KTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRD++H                 YELGRQ A TK+ S    K VR IRVRGG+ K+RALRLDTGN+SW +E +TRK RIL+VVYNA++N+LVRT TLVK +IVQ+DA P+KQWY  HYGV +G+
Sbjct:    1 MGISRDALHKHRLTGAARKCNYKKRKYELGRQAAKTKICSQGEEKRVRSIRVRGGHQKFRALRLDTGNFSWATEKITRKCRILNVVYNATSNDLVRTNTLVKGSIVQIDATPYKQWYETHYGVVVGK 127
[Close]
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_SPOFR (40S ribosomal protein S8 OS=Spodoptera frugiperda GN=RpS8 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.291e-34
Identity = 75/124 (60.48%), Postives = 87/124 (70.16%), Query Frame = 3 
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRD  H                 YELGR  ANTKL   + +  +R RGGN K+RALRLDTGN+SWGSE  TRK+RI+DVVYNASNNELVRT+TLVK+AIV VDA PF+QWY  HY + +GR
Sbjct:    1 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQR-IHLVRSRGGNTKYRALRLDTGNFSWGSECSTRKSRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGR 123
[Close]
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_DANRE (40S ribosomal protein S8 OS=Danio rerio GN=rps8 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.686e-34
Identity = 72/124 (58.06%), Postives = 87/124 (70.16%), Query Frame = 3 
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRD+ H                 YELGR  ANTK+   + +  IRVRGGN K+RALRLD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ +V VD+ P++QWY  HY + +GR
Sbjct:    1 MGISRDNWHKRRRTGGKRKPVHKKRKYELGRPAANTKIGPRR-IHTIRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCVVLVDSTPYRQWYESHYALPLGR 123
[Close]
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_RAT (40S ribosomal protein S8 OS=Rattus norvegicus GN=Rps8 PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 2.202e-34
Identity = 71/124 (57.26%), Postives = 87/124 (70.16%), Query Frame = 3 
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRD+ H                 YELGR  ANTK+   + +  +RVRGGN K+RALRLD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY  HY + +GR
Sbjct:    1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR 123
[Close]
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_MOUSE (40S ribosomal protein S8 OS=Mus musculus GN=Rps8 PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 2.202e-34
Identity = 71/124 (57.26%), Postives = 87/124 (70.16%), Query Frame = 3 
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRD+ H                 YELGR  ANTK+   + +  +RVRGGN K+RALRLD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY  HY + +GR
Sbjct:    1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR 123
[Close]
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_MACFA (40S ribosomal protein S8 OS=Macaca fascicularis GN=RPS8 PE=2 SV=3)

HSP 1 Score: 146.362 bits (368), Expect = 2.202e-34
Identity = 71/124 (57.26%), Postives = 87/124 (70.16%), Query Frame = 3 
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRD+ H                 YELGR  ANTK+   + +  +RVRGGN K+RALRLD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY  HY + +GR
Sbjct:    1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR 123
[Close]
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_HUMAN (40S ribosomal protein S8 OS=Homo sapiens GN=RPS8 PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 2.202e-34
Identity = 71/124 (57.26%), Postives = 87/124 (70.16%), Query Frame = 3 
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRD+ H                 YELGR  ANTK+   + +  +RVRGGN K+RALRLD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY  HY + +GR
Sbjct:    1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR 123
[Close]
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_BOVIN (40S ribosomal protein S8 OS=Bos taurus GN=RPS8 PE=2 SV=3)

HSP 1 Score: 146.362 bits (368), Expect = 2.202e-34
Identity = 71/124 (57.26%), Postives = 87/124 (70.16%), Query Frame = 3 
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRD+ H                 YELGR  ANTK+   + +  +RVRGGN K+RALRLD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY  HY + +GR
Sbjct:    1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR 123
[Close]
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_DROME (40S ribosomal protein S8 OS=Drosophila melanogaster GN=RpS8 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 6.406e-34
Identity = 73/124 (58.87%), Postives = 87/124 (70.16%), Query Frame = 3 
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRDS H                 +ELGR  ANTKL S + V ++R RGGN K RALRL+TGN++W SE V RKTRI DVVYNASNNELVRT+TLVK++IV +DA PF+QWY  HY + +GR
Sbjct:    1 MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGR-VHKVRTRGGNTKLRALRLETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGR 123
[Close]
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_CAEEL (40S ribosomal protein S8 OS=Caenorhabditis elegans GN=rps-8 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.366e-34
Identity = 71/124 (57.26%), Postives = 88/124 (70.97%), Query Frame = 3 
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRDS H                 +ELGR  ANTK+ +++ VR +R RGGN K+RALRLD+GN+SW SE  TRKTRI+D +YNA+NNELVRT+TLVK AI+ VDAAPF+QWY  HY + + R
Sbjct:    1 MGISRDSWHKRYKTGATQPVPHKKRKFELGRPAANTKIGAHR-VRLVRTRGGNEKYRALRLDSGNFSWASEQTTRKTRIVDTMYNATNNELVRTKTLVKGAIISVDAAPFRQWYEAHYALPLAR 123
The following BLAST results are available for this feature:
BLAST of EY684891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
RS8_DICDI9.882e-3558.2740S ribosomal protein S8 OS=Dictyostelium discoide... [more]
RS8_SPOFR1.291e-3460.4840S ribosomal protein S8 OS=Spodoptera frugiperda ... [more]
RS8_DANRE1.686e-3458.0640S ribosomal protein S8 OS=Danio rerio GN=rps8 PE... [more]
RS8_RAT2.202e-3457.2640S ribosomal protein S8 OS=Rattus norvegicus GN=R... [more]
RS8_MOUSE2.202e-3457.2640S ribosomal protein S8 OS=Mus musculus GN=Rps8 P... [more]
RS8_MACFA2.202e-3457.2640S ribosomal protein S8 OS=Macaca fascicularis GN... [more]
RS8_HUMAN2.202e-3457.2640S ribosomal protein S8 OS=Homo sapiens GN=RPS8 P... [more]
RS8_BOVIN2.202e-3457.2640S ribosomal protein S8 OS=Bos taurus GN=RPS8 PE=... [more]
RS8_DROME6.406e-3458.8740S ribosomal protein S8 OS=Drosophila melanogaste... [more]
RS8_CAEEL8.366e-3457.2640S ribosomal protein S8 OS=Caenorhabditis elegans... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-A01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684891 ID=EY684891; Name=EY684891; organism=Citrus sinensis; type=EST; length=913bp
CAAACGCTGAATCACCTATCAATCGCCCACAGACAGAGAAACCCTAAGAA
TTTCTCTCTGCGAAAATGGGTATTTCCCGTGATTCCATGCACAAGAGGCG
TGCTACTGGGGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGC
TTGGAAGGCAACCTGCAAATACTAAGCTATCAAGCAACAAGACAGTGAGG
AGGATTAGGGTTCGTGGAGGTAATGTGAAATGGCGTGCTTTGAGGCTTGA
CACAGGAAACTACTCCTGGGGAAGTGAAGCAGTGACTCGTAAGACCAGAA
TTCTGGATGTGGTATACAATGCCTCCAATAATGAGCTGGTCCGTACTCAA
ACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCAGCACCATTCAAGCA
GTGGTATCTCCAGCATTATGGTGTTGACATTGGTCGCAAGAAGAAGGCTG
CAGCTGCTGCCACAACCAAGAAAGAAGGAGAGGAAGGAGAGGCTCCCGCC
ACTGAGGAGGCAAAGAAGAGCAACCCATGTCTCGAAGAAAGCTTGAAAAG
CGGTCAAAAAGATCGCACACTTGACCCCACATATTGAGGAGCAGTTTGGG
TAGTGGACGTTTGGTTACTTGAACTCCATCCCGAGCTGGCCCACGGGGGA
CGACGGCGAAGCAAAAATATTGACACGGGAACGACATAGATTCTCCACCC
TCCCAAACTCCCCCACGCACCCACCCGACGACCCGCCCCGCCTCCCCCCC
CCCGCCGCCCACCAACGCCCCAACCACCCGCATCCCCAACCTCCCCCCTC
CACACCGCCACCACACCTCACCCACCACCCGAGCGACCCGACCCCCACCC
ACCCCAGGCGACGCCTCCCCGTCCCTCAAAACCCGCGGCATCCTAACACA
GCCGAGCGCGAGA
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