EY684891

Overview
NameEY684891
Unique NameEY684891
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8B_SCHPO (40S ribosomal protein S8-B OS=Schizosaccharomyces pombe GN=rps8b PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.366e-34
Identity = 70/123 (56.91%), Postives = 88/123 (71.54%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIG 434
            MGI+RDS H                 +ELGRQP+NT++   K +  +RVRGGN K+RALRLD+GN+SWGSE V++KTRI+ V Y+ SNNELVRT TL KSAIVQ+DAAPF+ WY  HYG+ +G
Sbjct:    1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGP-KRIHEVRVRGGNKKFRALRLDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILMG 122          
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8A_SCHPO (40S ribosomal protein S8-A OS=Schizosaccharomyces pombe GN=rps8a PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.366e-34
Identity = 70/123 (56.91%), Postives = 88/123 (71.54%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIG 434
            MGI+RDS H                 +ELGRQP+NT++   K +  +RVRGGN K+RALRLD+GN+SWGSE V++KTRI+ V Y+ SNNELVRT TL KSAIVQ+DAAPF+ WY  HYG+ +G
Sbjct:    1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGP-KRIHEVRVRGGNKKFRALRLDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILMG 122          
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_YEAST (40S ribosomal protein S8 OS=Saccharomyces cerevisiae GN=RPS8A PE=1 SV=3)

HSP 1 Score: 142.51 bits (358), Expect = 3.179e-33
Identity = 68/124 (54.84%), Postives = 87/124 (70.16%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRDS H                 +ELGRQPANTK+ + K +  +R RGGN K+RALR++TGN+SW SE +++KTRI  VVY+ SNNELVRT TL K+AIVQ+DA PF+QW+  HYG  +G+
Sbjct:    1 MGISRDSRHKRSATGAKRAQFRKKRKFELGRQPANTKIGA-KRIHSVRTRGGNKKYRALRIETGNFSWASEGISKKTRIAGVVYHPSNNELVRTNTLTKAAIVQIDATPFRQWFEAHYGQTLGK 123          
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_XENLA (40S ribosomal protein S8 OS=Xenopus laevis GN=rps8 PE=2 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 4.152e-33
Identity = 70/124 (56.45%), Postives = 86/124 (69.35%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 437
            MGISRD+ H                 YE GR  ANTK+   + +  +RVRGGN K+RALRLD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ I+ VD+ PF+QW+  HY + +GR
Sbjct:    1 MGISRDNWHKRRKTGGKRKPYHKKRKYEPGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDAGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCILLVDSTPFRQWFEAHYALPLGR 123          
BLAST of EY684891 vs. ExPASy Swiss-Prot
Match: RS8_LEIMA (40S ribosomal protein S8 OS=Leishmania major GN=RPS8 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.744e-31
Identity = 67/122 (54.92%), Postives = 85/122 (69.67%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDI 431
            MGI R  +H                  ELGR PANT+L + + V  +R RGGN K RALRLDTGN++W SEA+  + R+LDVVYNA++NELVRT+TLVK+ IV VDAAPFK+WY +HYG+D+
Sbjct:    1 MGIVRSRLHKRKITGGKTKIHRKRMKAELGRLPANTRLGARR-VSPVRARGGNFKIRALRLDTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGIDL 121          
The following BLAST results are available for this feature:
BLAST of EY684891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
RS8B_SCHPO8.366e-3456.9140S ribosomal protein S8-B OS=Schizosaccharomyces ... [more]
RS8A_SCHPO8.366e-3456.9140S ribosomal protein S8-A OS=Schizosaccharomyces ... [more]
RS8_YEAST3.179e-3354.8440S ribosomal protein S8 OS=Saccharomyces cerevisi... [more]
RS8_XENLA4.152e-3356.4540S ribosomal protein S8 OS=Xenopus laevis GN=rps8... [more]
RS8_LEIMA1.744e-3154.9240S ribosomal protein S8 OS=Leishmania major GN=RP... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-A01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684891 ID=EY684891; Name=EY684891; organism=Citrus sinensis; type=EST; length=913bp
CAAACGCTGAATCACCTATCAATCGCCCACAGACAGAGAAACCCTAAGAA
TTTCTCTCTGCGAAAATGGGTATTTCCCGTGATTCCATGCACAAGAGGCG
TGCTACTGGGGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGC
TTGGAAGGCAACCTGCAAATACTAAGCTATCAAGCAACAAGACAGTGAGG
AGGATTAGGGTTCGTGGAGGTAATGTGAAATGGCGTGCTTTGAGGCTTGA
CACAGGAAACTACTCCTGGGGAAGTGAAGCAGTGACTCGTAAGACCAGAA
TTCTGGATGTGGTATACAATGCCTCCAATAATGAGCTGGTCCGTACTCAA
ACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCAGCACCATTCAAGCA
GTGGTATCTCCAGCATTATGGTGTTGACATTGGTCGCAAGAAGAAGGCTG
CAGCTGCTGCCACAACCAAGAAAGAAGGAGAGGAAGGAGAGGCTCCCGCC
ACTGAGGAGGCAAAGAAGAGCAACCCATGTCTCGAAGAAAGCTTGAAAAG
CGGTCAAAAAGATCGCACACTTGACCCCACATATTGAGGAGCAGTTTGGG
TAGTGGACGTTTGGTTACTTGAACTCCATCCCGAGCTGGCCCACGGGGGA
CGACGGCGAAGCAAAAATATTGACACGGGAACGACATAGATTCTCCACCC
TCCCAAACTCCCCCACGCACCCACCCGACGACCCGCCCCGCCTCCCCCCC
CCCGCCGCCCACCAACGCCCCAACCACCCGCATCCCCAACCTCCCCCCTC
CACACCGCCACCACACCTCACCCACCACCCGAGCGACCCGACCCCCACCC
ACCCCAGGCGACGCCTCCCCGTCCCTCAAAACCCGCGGCATCCTAACACA
GCCGAGCGCGAGA
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