EY684854

Overview
NameEY684854
Unique NameEY684854
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: CDK9_RAT (Cell division protein kinase 9 OS=Rattus norvegicus GN=Cdk9 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.499e-25
Identity = 70/180 (38.89%), Postives = 98/180 (54.44%), Query Frame = 3
Query:    6 LLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLART-----TSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRM-LPQFPKQNFSARFPN--KSPGAVDLLGKMLVFDPPTNTPVDETL 521
            LL GL Y+H   +LHRD+K +N+L+  +  LK+ DFGLAR       S+ +  T  VVT WYR PELLL   +Y   ID+W  GCI+ E+ TR P+  G    HQL LI++L GS   T   +   D    + ++ L +  K+    R     + P A+DL+ K+LV DP      D+ L
Sbjct:  133 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS--ITPEVWPNVDKYELFEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 310          
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: CDK9_MOUSE (Cell division protein kinase 9 OS=Mus musculus GN=Cdk9 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.499e-25
Identity = 70/180 (38.89%), Postives = 98/180 (54.44%), Query Frame = 3
Query:    6 LLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLART-----TSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRM-LPQFPKQNFSARFPN--KSPGAVDLLGKMLVFDPPTNTPVDETL 521
            LL GL Y+H   +LHRD+K +N+L+  +  LK+ DFGLAR       S+ +  T  VVT WYR PELLL   +Y   ID+W  GCI+ E+ TR P+  G    HQL LI++L GS   T   +   D    + ++ L +  K+    R     + P A+DL+ K+LV DP      D+ L
Sbjct:  133 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS--ITPEVWPNVDKYELFEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 310          
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: CDK9_BOVIN (Cell division protein kinase 9 OS=Bos taurus GN=CDK9 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.182e-25
Identity = 68/178 (38.20%), Postives = 95/178 (53.37%), Query Frame = 3
Query:    6 LLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLART-----TSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGS-PDETSLGFLRSDNARRYVRMLPQFPKQNFSARFPNKSPGAVDLLGKMLVFDPPTNTPVDETL 521
            LL GL Y+H   +LHRD+K +N+L+  +  LK+ DFGLAR       S+ +  T  VVT WYR PELLL   +Y   ID+W  GCI+ E+ TR P+  G    HQL LI++L GS   E      + +   +   +  Q  K     +   + P A+DL+ K+LV DP      D+ L
Sbjct:  133 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDKYELFEKVELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 310          
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: CDK4_MOUSE (Cell division protein kinase 4 OS=Mus musculus GN=Cdk4 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.182e-25
Identity = 70/168 (41.67%), Postives = 93/168 (55.36%), Query Frame = 3
Query:    3 QLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRM-----LPQFPKQNFSARFPNKSPGAVDLLGKMLVFDP 491
            Q L GL ++H+  ++HRDLKP N+L+ +N  +K+ DFGLAR  S    +T  VVT WYRAPE+LL  S Y   +D+WSVGCI  E+  R+PLF G     QL  I +LIG P E        D+  R V +      P+ P+   S   P        LL +ML F+P
Sbjct:  123 QFLSGLDFLHANCIVHRDLKPENILVTSNGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE--------DDWPREVSLPRGAFAPRGPRPVQSV-VPEMEESGAQLLLEMLTFNP 280          
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: CDC2_CAEBR (Cell division control protein 2 homolog OS=Caenorhabditis briggsae GN=cdk-1 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.182e-25
Identity = 63/184 (34.24%), Postives = 98/184 (53.26%), Query Frame = 3
Query:    3 QLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTS-ETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSARFPNKSPG-------AVDLLGKMLVFDPPTNTPVDETLRTP 530
            Q+L+ + + H   V+HRDLKP NLL++    +K+ DFGLAR         T  VVT WYRAPE+L+    Y+  +D+WS+GCI  E+ T++PLF G   + +L  I  ++G+P  T L +   ++   Y    P++ +     +F +K  G       A  LL  +L++DP       + L  P
Sbjct:  123 QILQAMCFCHQRRVIHRDLKPQNLLVDEKGAIKLADFGLARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEMATKKPLFQGDSEIDELFRIFRILGTP--TELEWNGVESLPDYKATFPKWRENFLRDKFYDKKSGNYLMDEDAFSLLEGLLIYDPALRISSKKALHHP 304          
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: KSGT_BRANA (Shaggy-related protein kinase theta OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 9.380e-25
Identity = 71/199 (35.68%), Postives = 106/199 (53.27%), Query Frame = 3
Query:    3 QLLRGLKYVHSA-NVLHRDLKPSNLLLNANC-DLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFP-KQNFSARFPNKSPGAVDLLGKMLVFDPPTNT--------PVDETLRTP---IPHTPALLP 557
            Q+ R L Y+H    V HRD+KP NLL+N +   LKI DFG A+     +    Y+ +R+YRAPEL+   +EYT AID+WS GC++ E++  QPLFPG+  + QL  I +++G+P    +  +  +        +   P  + F  R P   P AVDL+ ++L + P            P  + LR P   +P+  AL P
Sbjct:  241 QICRALNYLHRVVGVCHRDIKPQNLLVNTHTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTNAIDMWSGGCVMAELLLGQPLFPGESGIDQLVEIIKILGTPTREEIRCMNPNYTEFKFPQIKAHPWHKIFHKRMP---PEAVDLVSRLLQYSPNLRCTALEACAHPFFDDLRAPNVSLPNGRALPP 436          
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: GSK3_CAEEL (Glycogen synthase kinase-3 OS=Caenorhabditis elegans GN=gsk-3 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.225e-24
Identity = 68/199 (34.17%), Postives = 105/199 (52.76%), Query Frame = 3
Query:    3 QLLRGLKYVHSANVLHRDLKPSNLLLNANCD-LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSARFPNKSPG-AVDLLGKMLVFDPPTNTPVDET---------LRTPIPHTPALLPNKT 566
            QLLR L Y+HS  + HRD+KP NLL++     LK+ DFG A+     +    Y+ +R+YRAPEL+   + YT +ID+WS G ++ E++  QP+FPG   V QL  I +++G+P       ++S N        PQ     ++  F   +P  A+DL+ K++ +  PT+ P  +          LR P    P+  P  T
Sbjct:  144 QLLRSLAYIHSIGICHRDIKPQNLLIDPESGVLKLCDFGSAKYLVRNEPNVSYICSRYYRAPELIFGATNYTNSIDVWSAGTVMAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IQSMNPNYKEFKFPQIKAHPWNKVFRVHTPAEAIDLISKIIEY-TPTSRPTPQAACQHAFFDELRNPDARLPSGRPLPT 338          
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: CDKL1_DANRE (Cyclin-dependent kinase-like 1 OS=Danio rerio GN=cdkl1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.225e-24
Identity = 60/177 (33.90%), Postives = 95/177 (53.67%), Query Frame = 3
Query:    3 QLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLART-TSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSARFPNKSPGAVDLLGKMLVFDPPTNTPVDETLRTP 530
            Q L+ + + H  N +HRD+KP N+L+  +  +K+ DFG AR  T   D+ T+ V TRWYRAPELL+  ++Y   +D+W+VGC+  E+++  PL+PGK  V QL LI + +G           ++     V +      +    ++PN S  A+ L+   L  DP      ++ L  P
Sbjct:  109 QTLQAVNFCHKQNCIHRDVKPENILITKHQVIKLCDFGFARILTGPCDYYTDCVATRWYRAPELLVGDTQYGPPVDVWAVGCVFAELLSGAPLWPGKSDVDQLYLIRKTLGELIPRHQQVFSTNQFFSGVCVPEPQEMEPLELKYPNLSYQALSLMKGCLRMDPAERLSCEQLLEQP 285          
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: CDK4_HUMAN (Cell division protein kinase 4 OS=Homo sapiens GN=CDK4 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.225e-24
Identity = 68/167 (40.72%), Postives = 91/167 (54.49%), Query Frame = 3
Query:    3 QLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRM----LPQFPKQNFSARFPNKSPGAVDLLGKMLVFDP 491
            Q LRGL ++H+  ++HRDLKP N+L+ +   +K+ DFGLAR  S    +T  VVT WYRAPE+LL  S Y   +D+WSVGCI  E+  R+PLF G     QL  I +LIG P E        D+  R V +     P    +   +  P        LL +ML F+P
Sbjct:  123 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE--------DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNP 280          
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: SSN3_YEAST (Meiotic mRNA stability protein kinase SSN3 OS=Saccharomyces cerevisiae GN=SSN3 PE=1 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 1.600e-24
Identity = 69/182 (37.91%), Postives = 102/182 (56.04%), Query Frame = 3
Query:    3 QLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEY-----VVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKD-----------YVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSARFPN---KSPGAVDLLGKMLVFDP 491
            QLL G+ Y+H   VLHRDLKP+N+++  +  +KIGD GLAR        T Y     VVT WYRAPELLL    YT A+D+WSVGCI  E++  QP+F G++            V+QL+ I E++G+PD+    +L        +   P++ + N +  + +   +   A+ LL  +L +DP
Sbjct:  269 QLLDGVSYLHQNWVLHRDLKPANIMVTIDGCVKIGDLGLARKFHNM-LQTLYTGDKVVVTIWYRAPELLLGARHYTPAVDLWSVGCIFAELIGLQPIFKGEEAKLDSKKTVPFQVNQLQRILEVLGTPDQKIWPYLEKYPEYDQITKFPKY-RDNLATWYHSAGGRDKHALSLLYHLLNYDP 448          
The following BLAST results are available for this feature:
BLAST of EY684854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK9_RAT5.499e-2538.89Cell division protein kinase 9 OS=Rattus norvegicu... [more]
CDK9_MOUSE5.499e-2538.89Cell division protein kinase 9 OS=Mus musculus GN=... [more]
CDK9_BOVIN7.182e-2538.20Cell division protein kinase 9 OS=Bos taurus GN=CD... [more]
CDK4_MOUSE7.182e-2541.67Cell division protein kinase 4 OS=Mus musculus GN=... [more]
CDC2_CAEBR7.182e-2534.24Cell division control protein 2 homolog OS=Caenorh... [more]
KSGT_BRANA9.380e-2535.68Shaggy-related protein kinase theta OS=Brassica na... [more]
GSK3_CAEEL1.225e-2434.17Glycogen synthase kinase-3 OS=Caenorhabditis elega... [more]
CDKL1_DANRE1.225e-2433.90Cyclin-dependent kinase-like 1 OS=Danio rerio GN=c... [more]
CDK4_HUMAN1.225e-2440.72Cell division protein kinase 4 OS=Homo sapiens GN=... [more]
SSN3_YEAST1.600e-2437.91Meiotic mRNA stability protein kinase SSN3 OS=Sacc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-004-E04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684854 ID=EY684854; Name=EY684854; organism=Citrus sinensis; type=EST; length=923bp
ATCAGTTGTTACGAGGGTTGAAATATGTACACTCAGCAAACGTTTTGCAT
CGTGATTTGAAGCCTAGCAATTTGCTCCTTAATGCCAATTGTGATCTTAA
AATTGGAGACTTTGGGCTTGCAAGGACAACATCAGAAACAGATTTCATGA
CTGAGTATGTTGTTACTCGTTGGTACCGGGCACCCGAACTGCTTCTTAAC
TGTTCAGAGTATACAGCAGCAATTGATATCTGGTCAGTTGGTTGCATACT
TGGTGAAATTATGACCAGACAACCCCTGTTCCCTGGAAAAGATTATGTCC
ATCAACTGAGGCTGATCACAGAGCTTATAGGTTCACCTGATGAAACCAGC
CTTGGGTTTCTACGAAGTGATAATGCCAGAAGATATGTTAGAATGCTTCC
ACAATTCCCGAAGCAAAATTTCTCTGCTAGATTTCCAAACAAATCTCCTG
GTGCTGTTGATTTGCTGGGAAAAATGCTTGTCTTTGATCCACCCACGAAC
ACTCCAGTTGATGAGACTCTGCGCACCCCCATTCCGCACACCCCTGCTCT
CCTTCCCAACAAAACCAGCGCGCCCAGACGACTCCAAACAGGAAGACGAA
CCCCCACACCTCACAGCCAAACCCCACCCCACAGCCACACTCACCACAAA
CCCCGACCAGACAAAAAACGCCAACGACGAATAGCAGAACAGATAATCAG
CTGTACTAGCGCCCCACGAGAAAGCGAAGAACCCACGCAACAAAGCACCA
ACACAACGGACGAAGCGAACGCCGCACGGGAGTGGACACCCAAACCCACC
CCCACCCCGCAAGCCCGCACCCACCCCACCCACCCCGACGCCAACGCACC
CGAACCACAACACCAGCGGAAGCTAAGCTACCCACAGAACCCCCCCACAC
CCGCCCCACCCAAACCCCCCACA
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