EY684854

Overview
NameEY684854
Unique NameEY684854
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: PRP4B_HUMAN (Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.238e-18
Identity = 51/111 (45.95%), Postives = 72/111 (64.86%), Query Frame = 3
Query:    3 QLLRGLKYVHSANVLHRDLKPSNLLLN-ANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIG 332
            QL   LK +   N+LH D+KP N+L+N +   LK+ DFG A   ++ D +T Y+V+R+YRAPE+++  S Y   ID+WSVGC L E+ T + LFPGK   H L+L  +L G
Sbjct:  798 QLFLALKLLKRCNILHADIKPDNILVNESKTILKLCDFGSASHVADND-ITPYLVSRFYRAPEIIIGKS-YDYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKG 906          
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: PRP4B_BOVIN (Serine/threonine-protein kinase PRP4 homolog OS=Bos taurus GN=PRPF4B PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.238e-18
Identity = 51/111 (45.95%), Postives = 72/111 (64.86%), Query Frame = 3
Query:    3 QLLRGLKYVHSANVLHRDLKPSNLLLN-ANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIG 332
            QL   LK +   N+LH D+KP N+L+N +   LK+ DFG A   ++ D +T Y+V+R+YRAPE+++  S Y   ID+WSVGC L E+ T + LFPGK   H L+L  +L G
Sbjct:  799 QLFLALKLLKRCNILHADIKPDNILVNESKTILKLCDFGSASHVADND-ITPYLVSRFYRAPEIIIGKS-YDYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKG 907          
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: DYRK2_DROME (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Drosophila melanogaster GN=smi35A PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.238e-18
Identity = 64/207 (30.92%), Postives = 104/207 (50.24%), Query Frame = 3
Query:    6 LLRGLKYVHSANVLHRDLKPSNLLLN--ANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFSARFPNKSPGA--------------VDLLGKMLVFDPPTNTPVDETLRTPIPHTPALLPNKTSAPR 578
            +++ L+ ++  N++H DLKP N+LL    +  +K+ DFG +       +   Y+ +R+YR+PE++L   +Y  AID+WS+GCIL E+ T  PLFPG++ V QL  I E++G P +  +   R    RR        P+   + +   +SPG+              +D L + L +DP      DE       H   L P+ +S  R
Sbjct:  308 IVKCLRLLYKENIIHCDLKPENILLKQRGSSSIKVIDFGSSCYVDRKIYT--YIQSRFYRSPEVILGL-QYGTAIDMWSLGCILAELYTGFPLFPGENEVEQLACIMEVLGLPPKVLISVAR---RRRLFFDSRDAPRCITNTKGRKRSPGSKSLAHILHCQDRYFIDFLQRCLEWDPAERMTPDEA-----AHHEFLQPSASSRHR 503          
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: CDK19_MOUSE (Cell division protein kinase 19 OS=Mus musculus GN=Cdk19 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.817e-18
Identity = 67/209 (32.06%), Postives = 101/209 (48.33%), Query Frame = 3
Query:    3 QLLRGLKYVHSANVLHRDLKPSNLLLNANCD----LKIGDFGLARTTSET----DFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKD---------YVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFP--KQNFS---------ARFPNKSPGAVD-----LLGKMLVFDPPTNTPVDETLRTP 530
            Q+L G+ Y+H+  VLHRDLKP+N+L+         +KI D G AR  +        +   VVT WYRAPELLL    YT AIDIW++GCI  E++T +P+F  +          +  QL  I  ++G P         +D     +R +P++P  +++F           ++  K     D     LL K+L  DP      ++ L+ P
Sbjct:  134 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFP---------ADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDP 333          
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: CDK19_HUMAN (Cell division protein kinase 19 OS=Homo sapiens GN=CDK19 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.817e-18
Identity = 67/209 (32.06%), Postives = 101/209 (48.33%), Query Frame = 3
Query:    3 QLLRGLKYVHSANVLHRDLKPSNLLLNANCD----LKIGDFGLARTTSET----DFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKD---------YVHQLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFP--KQNFS---------ARFPNKSPGAVD-----LLGKMLVFDPPTNTPVDETLRTP 530
            Q+L G+ Y+H+  VLHRDLKP+N+L+         +KI D G AR  +        +   VVT WYRAPELLL    YT AIDIW++GCI  E++T +P+F  +          +  QL  I  ++G P         +D     +R +P++P  +++F           ++  K     D     LL K+L  DP      ++ L+ P
Sbjct:  134 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFP---------ADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDP 333          
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: CDK8_DANRE (Cell division protein kinase 8 OS=Danio rerio GN=cdk8 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.985e-18
Identity = 64/202 (31.68%), Postives = 99/202 (49.01%), Query Frame = 3
Query:    3 QLLRGLKYVHSANVLHRDLKPSNLLLNANCD----LKIGDFGLARTTSET----DFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLF--------PGKDYVH-QLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFS----ARFPNK-----SPGAVDLLGKMLVFDPPTNTPVDETLRTP 530
            Q+L G+ Y+H+  VLHRDLKP+N+L+         +KI D G AR ++        +   VVT WYRAPELLL    YT AIDIW++GCI  E++T +P+F            Y H QL  I  ++G P +     ++      +  ++  F +  ++     ++  K        A  LL K+L  DP      ++ ++ P
Sbjct:  134 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLSNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIK--KMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIRRITSEQAMQDP 333          
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: PRP4B_DICDI (Serine/threonine-protein kinase prpf4B OS=Dictyostelium discoideum GN=prpf4B PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.511e-18
Identity = 49/112 (43.75%), Postives = 73/112 (65.18%), Query Frame = 3
Query:    3 QLLRGLKYVHSANVLHRDLKPSNLLLN-ANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGS 335
            QL   LK++ ++ +LH D+KP N+++N A   +KI DFG A    E++ +T Y+V+R+YRAPE++L   +Y  +ID+WSVGC L E  T + LFPGK     +RL  E  G+
Sbjct:  602 QLFLALKHIKNSKILHADIKPDNIVVNEAKNTIKIVDFGSAGEIHESE-ITPYLVSRFYRAPEIILG-HKYDYSIDVWSVGCCLAEFFTGKFLFPGKTNNDMIRLFMEYRGA 711          
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: CSK2A_THEPA (Casein kinase II subunit alpha OS=Theileria parva GN=TP04_0659 PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.511e-18
Identity = 59/175 (33.71%), Postives = 96/175 (54.86%), Query Frame = 3
Query:    3 QLLRGLKYVHSANVLHRDLKPSNLLLNANCD-LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCIL-GEIMTRQPLFPGKDYVHQLRLITELIGSPD------ETSLGFLRSDNARRYVRMLPQFPKQNFSARFPNK-----SPGAVDLLGKMLVFD 488
            QLL+ + Y HS  ++HRD+KP N++++     L++ D+GLA         +  V TR+Y+ PELL++   Y  ++DIWS+GC+L G I  ++P F G D   QL  I +++G+ D      +  L F     A  Y  +L    K+ ++    ++     SP  +DLL +MLV+D
Sbjct:  155 QLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAKVLGTEDLHRYFEKYGLKF-----APAYQEILGNHSKKPWTKFVHHENQHLVSPEVMDLLDRMLVYD 324          
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: CSK2A_THEAN (Casein kinase II subunit alpha OS=Theileria annulata GN=TA10630 PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.511e-18
Identity = 59/175 (33.71%), Postives = 96/175 (54.86%), Query Frame = 3
Query:    3 QLLRGLKYVHSANVLHRDLKPSNLLLNANCD-LKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCIL-GEIMTRQPLFPGKDYVHQLRLITELIGSPD------ETSLGFLRSDNARRYVRMLPQFPKQNFSARFPNK-----SPGAVDLLGKMLVFD 488
            QLL+ + Y HS  ++HRD+KP N++++     L++ D+GLA         +  V TR+Y+ PELL++   Y  ++DIWS+GC+L G I  ++P F G D   QL  I +++G+ D      +  L F     A  Y  +L    K+ ++    ++     SP  +DLL +MLV+D
Sbjct:  155 QLLKAMNYCHSQGIMHRDIKPHNVMIDHEKKILRLIDWGLAEFYHPEQEYSVRVATRYYKGPELLVDMRYYDYSLDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAKVLGTEDLHRYFEKYGLKF-----APAYQEILGNHSKKPWTKFVHHENQHLVSPEVMDLLDRMLVYD 324          
BLAST of EY684854 vs. ExPASy Swiss-Prot
Match: CDK8_MOUSE (Cell division protein kinase 8 OS=Mus musculus GN=Cdk8 PE=2 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 1.111e-17
Identity = 64/202 (31.68%), Postives = 98/202 (48.51%), Query Frame = 3
Query:    3 QLLRGLKYVHSANVLHRDLKPSNLLLNANCD----LKIGDFGLARTTSET----DFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLF--------PGKDYVH-QLRLITELIGSPDETSLGFLRSDNARRYVRMLPQFPKQNFS----ARFPNK-----SPGAVDLLGKMLVFDPPTNTPVDETLRTP 530
            Q+L G+ Y+H+  VLHRDLKP+N+L+         +KI D G AR  +        +   VVT WYRAPELLL    YT AIDIW++GCI  E++T +P+F            Y H QL  I  ++G P +     ++      +  ++  F +  ++     ++  K        A  LL K+L  DP      ++ ++ P
Sbjct:  134 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIK--KMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDP 333          
The following BLAST results are available for this feature:
BLAST of EY684854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PRP4B_HUMAN2.238e-1845.95Serine/threonine-protein kinase PRP4 homolog OS=Ho... [more]
PRP4B_BOVIN2.238e-1845.95Serine/threonine-protein kinase PRP4 homolog OS=Bo... [more]
DYRK2_DROME2.238e-1830.92Dual specificity tyrosine-phosphorylation-regulate... [more]
CDK19_MOUSE3.817e-1832.06Cell division protein kinase 19 OS=Mus musculus GN... [more]
CDK19_HUMAN3.817e-1832.06Cell division protein kinase 19 OS=Homo sapiens GN... [more]
CDK8_DANRE4.985e-1831.68Cell division protein kinase 8 OS=Danio rerio GN=c... [more]
PRP4B_DICDI6.511e-1843.75Serine/threonine-protein kinase prpf4B OS=Dictyost... [more]
CSK2A_THEPA6.511e-1833.71Casein kinase II subunit alpha OS=Theileria parva ... [more]
CSK2A_THEAN6.511e-1833.71Casein kinase II subunit alpha OS=Theileria annula... [more]
CDK8_MOUSE1.111e-1731.68Cell division protein kinase 8 OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-004-E04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684854 ID=EY684854; Name=EY684854; organism=Citrus sinensis; type=EST; length=923bp
ATCAGTTGTTACGAGGGTTGAAATATGTACACTCAGCAAACGTTTTGCAT
CGTGATTTGAAGCCTAGCAATTTGCTCCTTAATGCCAATTGTGATCTTAA
AATTGGAGACTTTGGGCTTGCAAGGACAACATCAGAAACAGATTTCATGA
CTGAGTATGTTGTTACTCGTTGGTACCGGGCACCCGAACTGCTTCTTAAC
TGTTCAGAGTATACAGCAGCAATTGATATCTGGTCAGTTGGTTGCATACT
TGGTGAAATTATGACCAGACAACCCCTGTTCCCTGGAAAAGATTATGTCC
ATCAACTGAGGCTGATCACAGAGCTTATAGGTTCACCTGATGAAACCAGC
CTTGGGTTTCTACGAAGTGATAATGCCAGAAGATATGTTAGAATGCTTCC
ACAATTCCCGAAGCAAAATTTCTCTGCTAGATTTCCAAACAAATCTCCTG
GTGCTGTTGATTTGCTGGGAAAAATGCTTGTCTTTGATCCACCCACGAAC
ACTCCAGTTGATGAGACTCTGCGCACCCCCATTCCGCACACCCCTGCTCT
CCTTCCCAACAAAACCAGCGCGCCCAGACGACTCCAAACAGGAAGACGAA
CCCCCACACCTCACAGCCAAACCCCACCCCACAGCCACACTCACCACAAA
CCCCGACCAGACAAAAAACGCCAACGACGAATAGCAGAACAGATAATCAG
CTGTACTAGCGCCCCACGAGAAAGCGAAGAACCCACGCAACAAAGCACCA
ACACAACGGACGAAGCGAACGCCGCACGGGAGTGGACACCCAAACCCACC
CCCACCCCGCAAGCCCGCACCCACCCCACCCACCCCGACGCCAACGCACC
CGAACCACAACACCAGCGGAAGCTAAGCTACCCACAGAACCCCCCCACAC
CCGCCCCACCCAAACCCCCCACA
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