EY684832

Overview
NameEY684832
Unique NameEY684832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length955
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ISCA_PHOLL (Iron-binding protein iscA OS=Photorhabdus luminescens subsp. laumondii GN=iscA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.274e-18
Identity = 45/106 (42.45%), Postives = 65/106 (61.32%), Query Frame = 2
Query:   50 AILLTEKALKHLSKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            +I LTE A + +S   S R + + LR+GV+  GCSGM+Y +EF +  N   DD+V E  G  ++ D KS+++L G +LD+    +  GF F NPN +  CGCG SF
Sbjct:    2 SISLTESAAQRVSSFLSHRGKGVGLRLGVRTSGCSGMAYLLEFADMINE--DDTVFEDKGVKVIVDGKSMVYLDGTELDFVKEGLNEGFKFNNPNVSSECGCGESF 105          
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ERPA_ALHEH (Iron-sulfur cluster insertion protein erpA OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=erpA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.274e-18
Identity = 47/121 (38.84%), Postives = 66/121 (54.55%), Query Frame = 2
Query:    5 SSTSAVAPATEDLKPAILLTEKALKHLSKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            S T+     TED +  ++    A +    +  E S+DL LR+ V  GGCSG  Y   F+ R      DSV+E DG   + DP S  +L G ++D+ + + G  F  +NPNAT TCGCG+SF
Sbjct:    2 SETAQSYDPTEDFQALVVTDSAAARVAQLIAQEESDDLKLRVFVSGGGCSGFQYGFTFDERIEE--GDSVVEKDGVTFLVDPMSSQYLMGAEIDFVEGIEGEQFVIRNPNATTTCGCGSSF 120          
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ERPA_XANC5 (Iron-sulfur cluster insertion protein erpA OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=erpA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.888e-18
Identity = 51/124 (41.13%), Postives = 71/124 (57.26%), Query Frame = 2
Query:    2 SSSTSAVAPATEDL-KPAILLTEKALKHLSKMRSERSEDLCLRIGVKQGGCSGMSYTMEF-ENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            S  T A AP  + + +P       A K    ++ E + DL LR+ ++ GGCSG  Y  EF ENRA    DD  +  DG  ++ DP SL +L G ++DY+++L G  F  +NPNA  TCGCG+SF
Sbjct:    6 SLPTVAPAPDYQSIDRPLNFSVAAAAKVRELIQEEGNADLALRVYIQGGGCSGFQYGFEFDENRAE---DDLAVATDGVTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNAKTTCGCGSSF 126          
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ERPA_XANCP (Iron-sulfur cluster insertion protein erpA OS=Xanthomonas campestris pv. campestris GN=erpA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.996e-18
Identity = 50/124 (40.32%), Postives = 72/124 (58.06%), Query Frame = 2
Query:    2 SSSTSAVAPATEDL-KPAILLTEKALKHLSKMRSERSEDLCLRIGVKQGGCSGMSYTMEF-ENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            S  T+A AP  + + +P       A K    ++ E + +L LR+ ++ GGCSG  Y  EF ENRA    DD  +  DG  ++ DP SL +L G ++DY+++L G  F  +NPNA  TCGCG+SF
Sbjct:    6 SLPTAAPAPDYQSIDRPLNFSNAAAAKVRELIQEEGNAELALRVYIQGGGCSGFQYGFEFDENRAE---DDLAVATDGVTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNAKTTCGCGSSF 126          
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ERPA_XANCB (Iron--sulfur cluster insertion protein erpA OS=Xanthomonas campestris pv. campestris (strain B100) GN=erpA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.996e-18
Identity = 50/124 (40.32%), Postives = 72/124 (58.06%), Query Frame = 2
Query:    2 SSSTSAVAPATEDL-KPAILLTEKALKHLSKMRSERSEDLCLRIGVKQGGCSGMSYTMEF-ENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            S  T+A AP  + + +P       A K    ++ E + +L LR+ ++ GGCSG  Y  EF ENRA    DD  +  DG  ++ DP SL +L G ++DY+++L G  F  +NPNA  TCGCG+SF
Sbjct:    6 SLPTAAPAPDYQSIDRPLNFSNAAAAKVRELIQEEGNAELALRVYIQGGGCSGFQYGFEFDENRAE---DDLAVATDGVTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNAKTTCGCGSSF 126          
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ERPA_XANC8 (Iron-sulfur cluster insertion protein erpA OS=Xanthomonas campestris pv. campestris (strain 8004) GN=erpA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.996e-18
Identity = 50/124 (40.32%), Postives = 72/124 (58.06%), Query Frame = 2
Query:    2 SSSTSAVAPATEDL-KPAILLTEKALKHLSKMRSERSEDLCLRIGVKQGGCSGMSYTMEF-ENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            S  T+A AP  + + +P       A K    ++ E + +L LR+ ++ GGCSG  Y  EF ENRA    DD  +  DG  ++ DP SL +L G ++DY+++L G  F  +NPNA  TCGCG+SF
Sbjct:    6 SLPTAAPAPDYQSIDRPLNFSNAAAAKVRELIQEEGNAELALRVYIQGGGCSGFQYGFEFDENRAE---DDLAVATDGVTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNAKTTCGCGSSF 126          
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ERPA_THIDA (Putative iron-sulfur cluster insertion protein erpA OS=Thiobacillus denitrificans (strain ATCC 25259) GN=erpA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.617e-17
Identity = 48/112 (42.86%), Postives = 63/112 (56.25%), Query Frame = 2
Query:   32 TEDLKPAILLTEKALKHLSKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            TE   P +     A K  S +  E + DL LR+ V  GGCSG  Y   F+   NA  DD+V+  +G  ++ D  S  +L G ++DYS+ L G  F  KNPNAT TCGCG+SF
Sbjct:    5 TEMESPLVFTDSAASKVKSLIDEEGNPDLKLRVFVSGGGCSGFQYGFTFDEAQNA--DDTVMVKNGVTLLVDSMSFQYLVGAEIDYSEGLEGAQFVIKNPNATTTCGCGSSF 114          
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ERPA_SHEDO (Iron-sulfur cluster insertion protein erpA OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=erpA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.418e-17
Identity = 47/112 (41.96%), Postives = 64/112 (57.14%), Query Frame = 2
Query:   32 TEDLKPAILLTEKALKHLSKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            T+   P       A+K    +  E++ +L LR+ V  GGCSG  Y   F+ +++A  DD VIE  G  +V DP SL +L G ++DY+  L G  F  KNPNA+ TCGCG SF
Sbjct:    5 TDAAMPIKFTDAAAIKVKGLLEEEQNPELKLRVYVTGGGCSGFQYGFTFDEKSSA--DDFVIEKQGVKLVVDPMSLQYLVGGEVDYTSGLEGSRFFVKNPNASSTCGCGASF 114          
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ERPA_BURTA (Putative iron-sulfur cluster insertion protein erpA OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=erpA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-17
Identity = 46/114 (40.35%), Postives = 65/114 (57.02%), Query Frame = 2
Query:   29 ATEDLKPAILLTEKALKHLSKMRSERSE-DLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            AT ++    + T+ A   + ++  E    DL LR+ V+ GGCSG  Y   F+   N   DD+V+  +G V++ D  S  +L G ++DY D L G  F  KNPNAT TCGCG+SF
Sbjct:    9 ATTEMPAPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTFDEEVNE--DDTVLNKNGVVLLVDAMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGSSF 120          
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ERPA_BURPS (Putative iron-sulfur cluster insertion protein erpA OS=Burkholderia pseudomallei GN=erpA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-17
Identity = 46/114 (40.35%), Postives = 65/114 (57.02%), Query Frame = 2
Query:   29 ATEDLKPAILLTEKALKHLSKMRSERSE-DLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            AT ++    + T+ A   + ++  E    DL LR+ V+ GGCSG  Y   F+   N   DD+V+  +G V++ D  S  +L G ++DY D L G  F  KNPNAT TCGCG+SF
Sbjct:    9 ATTEMPAPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTFDEEVNE--DDTVLNKNGVVLLVDAMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGSSF 120          
The following BLAST results are available for this feature:
BLAST of EY684832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 346
Match NameE-valueIdentityDescription
ISCA_PHOLL5.274e-1842.45Iron-binding protein iscA OS=Photorhabdus luminesc... [more]
ERPA_ALHEH5.274e-1838.84Iron-sulfur cluster insertion protein erpA OS=Alka... [more]
ERPA_XANC56.888e-1841.13Iron-sulfur cluster insertion protein erpA OS=Xant... [more]
ERPA_XANCP8.996e-1840.32Iron-sulfur cluster insertion protein erpA OS=Xant... [more]
ERPA_XANCB8.996e-1840.32Iron--sulfur cluster insertion protein erpA OS=Xan... [more]
ERPA_XANC88.996e-1840.32Iron-sulfur cluster insertion protein erpA OS=Xant... [more]
ERPA_THIDA2.617e-1742.86Putative iron-sulfur cluster insertion protein erp... [more]
ERPA_SHEDO3.418e-1741.96Iron-sulfur cluster insertion protein erpA OS=Shew... [more]
ERPA_BURTA5.831e-1740.35Putative iron-sulfur cluster insertion protein erp... [more]
ERPA_BURPS5.831e-1740.35Putative iron-sulfur cluster insertion protein erp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-004-C03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684832 ID=EY684832; Name=EY684832; organism=Citrus sinensis; type=EST; length=955bp
ATCATCCTCTACATCAGCGGTGGCGCCGGCGACGGAGGACCTGAAGCCGG
CGATTTTACTGACAGAGAAAGCACTAAAGCATCTAAGCAAGATGAGGTCT
GAGCGTAGTGAGGATTTGTGCTTAAGAATTGGAGTGAAACAGGGCGGATG
CTCCGGCATGTCTTACACGATGGAGTTTGAGAACAGAGCAAATGCGAGAC
CAGATGATTCGGTTATCGAATATGATGGTTTTGTGATTGTTTGTGATCCA
AAGAGTCTCCTCTTTTTGTTTGGGATGCAATTGGATTACAGTGATGCCCT
TATTGGTGGAGGCTTTTCTTTCAAGAACCCAAATGCTACGCAAACTTGCG
GTTGCGGTACATCATTTGGCACAAGAGATGAGAGTACAATAGCTGGGGGG
TAGCGAGACAGTCCAACAATCACTAATGCCCACTACAACCTGCACCCACC
CAAAGAAAGTCAGAACAACACACAGCCAACTACTCTCAATCCCCCTATGC
ACATTTCAACCCTACAAGCTCCCCACAGCAGGCCGAACGCATAGCCCCCT
TACAATGCCCCCAGTGTCCCGACATGGCCTTCAGGCTCATGAAACCCCAC
TCACAACCCCAACCACACATAAACTACGACAAGCCACCACCGCTCAGAGC
TAAACCTCGCCCGTCCAACCCAGAAACCCCACCAGACAGGCACGTCCACT
ACGCACGCCACCCCACCCCAACACCTATGCACTAACCAACAAGACAAATA
ACAAACTGGCACTCGGACGCAGTGAGCGAGACACACAAGAAAAAGTTGAA
GACGCACCACGACAAGCGAAAGACAAAAACAACCCGAAAGAGCGAGGAGG
ACAGGATCACCCAAGCGCACGCACCAGAAAACGCCAACCCCCACCACCCC
CCCACCACGAGACCGTGCGGAGGACTACCACCCTCCGCACACCCCGAGCC
CGTCC
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