EY684832

Overview
NameEY684832
Unique NameEY684832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length955
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ERPA_BURP6 (Putative iron-sulfur cluster insertion protein erpA OS=Burkholderia pseudomallei (strain 668) GN=erpA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-17
Identity = 46/114 (40.35%), Postives = 65/114 (57.02%), Query Frame = 2
Query:   29 ATEDLKPAILLTEKALKHLSKMRSERSE-DLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            AT ++    + T+ A   + ++  E    DL LR+ V+ GGCSG  Y   F+   N   DD+V+  +G V++ D  S  +L G ++DY D L G  F  KNPNAT TCGCG+SF
Sbjct:    9 ATTEMPAPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTFDEEVNE--DDTVLNKNGVVLLVDAMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGSSF 120          
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ERPA_BURP1 (Putative iron-sulfur cluster insertion protein erpA OS=Burkholderia pseudomallei (strain 1710b) GN=erpA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-17
Identity = 46/114 (40.35%), Postives = 65/114 (57.02%), Query Frame = 2
Query:   29 ATEDLKPAILLTEKALKHLSKMRSERSE-DLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            AT ++    + T+ A   + ++  E    DL LR+ V+ GGCSG  Y   F+   N   DD+V+  +G V++ D  S  +L G ++DY D L G  F  KNPNAT TCGCG+SF
Sbjct:    9 ATTEMPAPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTFDEEVNE--DDTVLNKNGVVLLVDAMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGSSF 120          
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ERPA_BURP0 (Putative iron-sulfur cluster insertion protein erpA OS=Burkholderia pseudomallei (strain 1106a) GN=erpA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-17
Identity = 46/114 (40.35%), Postives = 65/114 (57.02%), Query Frame = 2
Query:   29 ATEDLKPAILLTEKALKHLSKMRSERSE-DLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            AT ++    + T+ A   + ++  E    DL LR+ V+ GGCSG  Y   F+   N   DD+V+  +G V++ D  S  +L G ++DY D L G  F  KNPNAT TCGCG+SF
Sbjct:    9 ATTEMPAPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTFDEEVNE--DDTVLNKNGVVLLVDAMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGSSF 120          
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ERPA_BURMS (Putative iron-sulfur cluster insertion protein erpA OS=Burkholderia mallei (strain SAVP1) GN=erpA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-17
Identity = 46/114 (40.35%), Postives = 65/114 (57.02%), Query Frame = 2
Query:   29 ATEDLKPAILLTEKALKHLSKMRSERSE-DLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            AT ++    + T+ A   + ++  E    DL LR+ V+ GGCSG  Y   F+   N   DD+V+  +G V++ D  S  +L G ++DY D L G  F  KNPNAT TCGCG+SF
Sbjct:    9 ATTEMPAPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTFDEEVNE--DDTVLNKNGVVLLVDAMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGSSF 120          
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ERPA_BURMA (Putative iron-sulfur cluster insertion protein erpA OS=Burkholderia mallei GN=erpA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-17
Identity = 46/114 (40.35%), Postives = 65/114 (57.02%), Query Frame = 2
Query:   29 ATEDLKPAILLTEKALKHLSKMRSERSE-DLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            AT ++    + T+ A   + ++  E    DL LR+ V+ GGCSG  Y   F+   N   DD+V+  +G V++ D  S  +L G ++DY D L G  F  KNPNAT TCGCG+SF
Sbjct:    9 ATTEMPAPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTFDEEVNE--DDTVLNKNGVVLLVDAMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGSSF 120          
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ERPA_BURM9 (Putative iron-sulfur cluster insertion protein erpA OS=Burkholderia mallei (strain NCTC 10229) GN=erpA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-17
Identity = 46/114 (40.35%), Postives = 65/114 (57.02%), Query Frame = 2
Query:   29 ATEDLKPAILLTEKALKHLSKMRSERSE-DLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            AT ++    + T+ A   + ++  E    DL LR+ V+ GGCSG  Y   F+   N   DD+V+  +G V++ D  S  +L G ++DY D L G  F  KNPNAT TCGCG+SF
Sbjct:    9 ATTEMPAPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTFDEEVNE--DDTVLNKNGVVLLVDAMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGSSF 120          
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ERPA_BURM7 (Putative iron-sulfur cluster insertion protein erpA OS=Burkholderia mallei (strain NCTC 10247) GN=erpA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-17
Identity = 46/114 (40.35%), Postives = 65/114 (57.02%), Query Frame = 2
Query:   29 ATEDLKPAILLTEKALKHLSKMRSERSE-DLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            AT ++    + T+ A   + ++  E    DL LR+ V+ GGCSG  Y   F+   N   DD+V+  +G V++ D  S  +L G ++DY D L G  F  KNPNAT TCGCG+SF
Sbjct:    9 ATTEMPAPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTFDEEVNE--DDTVLNKNGVVLLVDAMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGSSF 120          
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ISCA_EDWI9 (Iron-binding protein iscA OS=Edwardsiella ictaluri (strain 93-146) GN=iscA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.615e-17
Identity = 44/106 (41.51%), Postives = 62/106 (58.49%), Query Frame = 2
Query:   50 AILLTEKALKHLSKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            +I +++ A K +    + R + L LR+GVK  GCSGM+Y +EF +  N   DD V E  G  ++ D KSL++L G +LD+    +  GF F NPN    CGCG SF
Sbjct:    2 SITMSDSAAKRVQTFLTNRGKGLGLRLGVKTSGCSGMAYVLEFVDVLNE--DDVVFEDQGVKVIVDGKSLVYLDGTELDFVKEGLNEGFKFNNPNVKNECGCGESF 105          
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ERPA_ACIF5 (Iron--sulfur cluster insertion protein erpA OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=erpA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.615e-17
Identity = 47/112 (41.96%), Postives = 64/112 (57.14%), Query Frame = 2
Query:   35 EDLKPAILLTEKAL-KHLSKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            + + P + LT+ A  K  S +  E S+DL LR+ V  GGCSG  Y   F+   N    D+ +   G  ++ DP S  +L G ++DYS+ L G  F  KNPNAT TCGCG+SF
Sbjct:   13 DSIPPVMTLTQNAADKIASLIEEEGSDDLKLRVFVTGGGCSGFQYGFTFDENMNE--GDTEVHQLGVSLLIDPMSYQYLVGAEIDYSEGLEGAQFVIKNPNATTTCGCGSSF 122          
BLAST of EY684832 vs. ExPASy Swiss-Prot
Match: ERPA_ACIF2 (Iron--sulfur cluster insertion protein erpA OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=erpA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.615e-17
Identity = 47/112 (41.96%), Postives = 64/112 (57.14%), Query Frame = 2
Query:   35 EDLKPAILLTEKAL-KHLSKMRSERSEDLCLRIGVKQGGCSGMSYTMEFENRANARPDDSVIEYDGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCGCGTSF 367
            + + P + LT+ A  K  S +  E S+DL LR+ V  GGCSG  Y   F+   N    D+ +   G  ++ DP S  +L G ++DYS+ L G  F  KNPNAT TCGCG+SF
Sbjct:   13 DSIPPVMTLTQNAADKIASLIEEEGSDDLKLRVFVTGGGCSGFQYGFTFDENMNE--GDTEVHQLGVSLLIDPMSYQYLVGAEIDYSEGLEGAQFVIKNPNATTTCGCGSSF 122          
The following BLAST results are available for this feature:
BLAST of EY684832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 346
Match NameE-valueIdentityDescription
ERPA_BURP65.831e-1740.35Putative iron-sulfur cluster insertion protein erp... [more]
ERPA_BURP15.831e-1740.35Putative iron-sulfur cluster insertion protein erp... [more]
ERPA_BURP05.831e-1740.35Putative iron-sulfur cluster insertion protein erp... [more]
ERPA_BURMS5.831e-1740.35Putative iron-sulfur cluster insertion protein erp... [more]
ERPA_BURMA5.831e-1740.35Putative iron-sulfur cluster insertion protein erp... [more]
ERPA_BURM95.831e-1740.35Putative iron-sulfur cluster insertion protein erp... [more]
ERPA_BURM75.831e-1740.35Putative iron-sulfur cluster insertion protein erp... [more]
ISCA_EDWI97.615e-1741.51Iron-binding protein iscA OS=Edwardsiella ictaluri... [more]
ERPA_ACIF57.615e-1741.96Iron--sulfur cluster insertion protein erpA OS=Aci... [more]
ERPA_ACIF27.615e-1741.96Iron--sulfur cluster insertion protein erpA OS=Aci... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-004-C03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684832 ID=EY684832; Name=EY684832; organism=Citrus sinensis; type=EST; length=955bp
ATCATCCTCTACATCAGCGGTGGCGCCGGCGACGGAGGACCTGAAGCCGG
CGATTTTACTGACAGAGAAAGCACTAAAGCATCTAAGCAAGATGAGGTCT
GAGCGTAGTGAGGATTTGTGCTTAAGAATTGGAGTGAAACAGGGCGGATG
CTCCGGCATGTCTTACACGATGGAGTTTGAGAACAGAGCAAATGCGAGAC
CAGATGATTCGGTTATCGAATATGATGGTTTTGTGATTGTTTGTGATCCA
AAGAGTCTCCTCTTTTTGTTTGGGATGCAATTGGATTACAGTGATGCCCT
TATTGGTGGAGGCTTTTCTTTCAAGAACCCAAATGCTACGCAAACTTGCG
GTTGCGGTACATCATTTGGCACAAGAGATGAGAGTACAATAGCTGGGGGG
TAGCGAGACAGTCCAACAATCACTAATGCCCACTACAACCTGCACCCACC
CAAAGAAAGTCAGAACAACACACAGCCAACTACTCTCAATCCCCCTATGC
ACATTTCAACCCTACAAGCTCCCCACAGCAGGCCGAACGCATAGCCCCCT
TACAATGCCCCCAGTGTCCCGACATGGCCTTCAGGCTCATGAAACCCCAC
TCACAACCCCAACCACACATAAACTACGACAAGCCACCACCGCTCAGAGC
TAAACCTCGCCCGTCCAACCCAGAAACCCCACCAGACAGGCACGTCCACT
ACGCACGCCACCCCACCCCAACACCTATGCACTAACCAACAAGACAAATA
ACAAACTGGCACTCGGACGCAGTGAGCGAGACACACAAGAAAAAGTTGAA
GACGCACCACGACAAGCGAAAGACAAAAACAACCCGAAAGAGCGAGGAGG
ACAGGATCACCCAAGCGCACGCACCAGAAAACGCCAACCCCCACCACCCC
CCCACCACGAGACCGTGCGGAGGACTACCACCCTCCGCACACCCCGAGCC
CGTCC
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