EY684818

Overview
NameEY684818
Unique NameEY684818
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length964
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684818 vs. ExPASy Swiss-Prot
Match: IAA23_ORYSJ (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica GN=IAA23 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.187e-17
Identity = 40/62 (64.52%), Postives = 52/62 (83.87%), Query Frame = 3
Query:   63 GQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPR 248
            G DG   ++L+DL+ G+EYV TYED+DGDWMLVGDVPW MF E+C+R+R+MK SEA+ L+PR
Sbjct:  129 GGDG-EGTKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKSSEAVNLSPR 189          
BLAST of EY684818 vs. ExPASy Swiss-Prot
Match: AX22B_PHAAU (Auxin-induced protein 22B OS=Phaseolus aureus GN=AUX22B PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.220e-15
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = 3
Query:  108 GSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGL 239
            GSEY  TYED+DGDWMLVGDVPWDMF  +C+RLRIMKGSEA GL
Sbjct:  149 GSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEARGL 192          
BLAST of EY684818 vs. ExPASy Swiss-Prot
Match: IAA4_PEA (Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA4/5 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.402e-15
Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 3
Query:  108 GSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGL 239
            GSEY  TYED+DGDWMLVGDVPWDMF  +C+RLRIMKG+EA GL
Sbjct:  142 GSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEAKGL 185          
BLAST of EY684818 vs. ExPASy Swiss-Prot
Match: AX22D_PHAAU (Auxin-induced protein 22D OS=Phaseolus aureus GN=AUX22D PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.402e-15
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 3
Query:  105 HGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGL 239
            +GSEY  TYED+DGDWMLVGDVPW+MF  +C+RLRIMKGSEA GL
Sbjct:  146 NGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIMKGSEAKGL 190          
BLAST of EY684818 vs. ExPASy Swiss-Prot
Match: AX22E_PHAAU (Auxin-induced protein 22E OS=Phaseolus aureus GN=AUX22E PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.736e-14
Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = 3
Query:  105 HGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGL 239
            +GSEY  TYED+DGDWMLVGDVPW+MF  +C+RLRI+KGSEA GL
Sbjct:  156 NGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIIKGSEAKGL 200          
BLAST of EY684818 vs. ExPASy Swiss-Prot
Match: IAA3_ARATH (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.573e-14
Identity = 34/44 (77.27%), Postives = 40/44 (90.91%), Query Frame = 3
Query:  108 GSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGL 239
            GS++V TYED+DGDWML+GDVPW+MF  TC+RLRIMKGSEA GL
Sbjct:  142 GSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGL 185          
BLAST of EY684818 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSJ (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.573e-14
Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = 3
Query:   15 MFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPR 248
            MF+  +IG C SH        +  +L+D  + +EY LTYEDRDGDWMLVGDVPW+MF  + +RLRIM+ S+A GL  R
Sbjct:  197 MFTKPSIGLCASHNT------NSLKLLD--NSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 266          
BLAST of EY684818 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSI (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.573e-14
Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = 3
Query:   15 MFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPR 248
            MF+  +IG C SH        +  +L+D  + +EY LTYEDRDGDWMLVGDVPW+MF  + +RLRIM+ S+A GL  R
Sbjct:  197 MFTKPSIGLCASHNT------NSLKLLD--NSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 266          
BLAST of EY684818 vs. ExPASy Swiss-Prot
Match: IAA4_ARATH (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 6.094e-14
Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = 3
Query:  108 GSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGL 239
            GS++V TYED+DGDWMLVGDVPW+MF  +C+RLRIMKGSE  GL
Sbjct:  138 GSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGL 181          
BLAST of EY684818 vs. ExPASy Swiss-Prot
Match: IAA13_ARATH (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana GN=IAA13 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.959e-14
Identity = 41/69 (59.42%), Postives = 51/69 (73.91%), Query Frame = 3
Query:   60 PGQDGLSE--SRLMDLLHGS-EYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPRAME 257
            PG  GL+   ++ + LL GS E+VLTYED++GDWMLVGDVPW MF  + +RLR+MK SEA GLA R  E
Sbjct:  169 PGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQE 237          
The following BLAST results are available for this feature:
BLAST of EY684818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
IAA23_ORYSJ1.187e-1764.52Auxin-responsive protein IAA23 OS=Oryza sativa sub... [more]
AX22B_PHAAU4.220e-1581.82Auxin-induced protein 22B OS=Phaseolus aureus GN=A... [more]
IAA4_PEA9.402e-1579.55Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA... [more]
AX22D_PHAAU9.402e-1577.78Auxin-induced protein 22D OS=Phaseolus aureus GN=A... [more]
AX22E_PHAAU2.736e-1475.56Auxin-induced protein 22E OS=Phaseolus aureus GN=A... [more]
IAA3_ARATH3.573e-1477.27Auxin-responsive protein IAA3 OS=Arabidopsis thali... [more]
IAA10_ORYSJ3.573e-1452.56Auxin-responsive protein IAA10 OS=Oryza sativa sub... [more]
IAA10_ORYSI3.573e-1452.56Auxin-responsive protein IAA10 OS=Oryza sativa sub... [more]
IAA4_ARATH6.094e-1475.00Auxin-responsive protein IAA4 OS=Arabidopsis thali... [more]
IAA13_ARATH7.959e-1459.42Auxin-responsive protein IAA13 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-004-A10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684818 ID=EY684818; Name=EY684818; organism=Citrus sinensis; type=EST; length=964bp
CCACGCGTCCGAAGATGTTCAGCTGCTTTACCATTGGGCAATGTGATTCT
CATGGTCTTCCGGGGCAAGACGGCCTAAGTGAGAGTCGTCTGATGGATCT
TCTCCATGGTTCTGAATATGTGCTTACATATGAAGACAGGGATGGTGACT
GGATGCTTGTTGGTGATGTCCCTTGGGATATGTTCACTGAGACGTGTAGA
AGACTTCGCATCATGAAAGGTTCAGAGGCTATTGGACTGGCTCCAAGGGC
CATGGAGAAGTGCAAGAACCGAACTTAGTGTCGCAAATATCTTGAAAGAC
TTAAAAAGGGAGAAAATTTGTTTTTTTCAGAATCCAAACACGTGAAAAGA
TGTTAGGCATTTTGTTCAAGGACCCTATTATTATATAAATGTTATCAAAT
ATCATAAGGTTTGCTGTATTTAATTACTTAATATGGGGAAAACATCCCTC
TACACAAAGATAGCACTGCAGACATATCCGTTCTACGTTTGTTTTAACAT
CTTATTTTGTTCCTCTTCACTTTTCCGGCGACCTTTTCTAGCAATCCCCC
ACACACCCGCCCCAGCCCCAATCCCCCGGCCCACGTGCGCCGCCGCCGCC
AAAAGCACGACAACCGAAAGGACCACCAAAACACCCAACACAAACAACCA
AAACACCAGCGAACACCACGAACCCAAGAACCACACCGCAGCAACAAAGA
ACCCACGCACACACGGGACAGTCGAGAACACGCCAGAGCTCAACAAAGGC
AGCCGCGAACAGAGCGCACCCCCCCCACCGCAAGAACTCGACGAGACCAG
GGCGCCGCCAACCCCAACCACAGCGACAGCGCAGCCCACCAGCGGGACCC
AACAAGAGAGAACCAGACCGACACGACAGCAGCCACAACAACACCAACAT
AGACTCTGACGATTATGCGGTACTGAGCACAACACCGAACGGCGCGCCAC
GGACACCACTGGCA
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