EY684808

Overview
NameEY684808
Unique NameEY684808
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684808 vs. ExPASy Swiss-Prot
Match: RB11B_DISOM (Ras-related protein Rab-11B OS=Discopyge ommata PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.847e-26
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 1
Query:  112 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 375
            +EYDYLFK++LIGDS VGKS LL RF  + +     STIGV+F  R++++DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+
Sbjct:    6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI 93          
BLAST of EY684808 vs. ExPASy Swiss-Prot
Match: RB11B_BOVIN (Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3)

HSP 1 Score: 117.857 bits (294), Expect = 7.847e-26
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 1
Query:  112 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 375
            +EYDYLFK++LIGDS VGKS LL RF  + +     STIGV+F  R++++DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+
Sbjct:    6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI 93          
BLAST of EY684808 vs. ExPASy Swiss-Prot
Match: RB11A_RAT (Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1 SV=3)

HSP 1 Score: 117.857 bits (294), Expect = 7.847e-26
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 1
Query:  112 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 375
            +EYDYLFK++LIGDS VGKS LL RF  + +     STIGV+F  R++++DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+
Sbjct:    6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI 93          
BLAST of EY684808 vs. ExPASy Swiss-Prot
Match: RB11A_RABIT (Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2 SV=3)

HSP 1 Score: 117.857 bits (294), Expect = 7.847e-26
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 1
Query:  112 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 375
            +EYDYLFK++LIGDS VGKS LL RF  + +     STIGV+F  R++++DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+
Sbjct:    6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI 93          
BLAST of EY684808 vs. ExPASy Swiss-Prot
Match: RB11A_PONAB (Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3)

HSP 1 Score: 117.857 bits (294), Expect = 7.847e-26
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 1
Query:  112 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 375
            +EYDYLFK++LIGDS VGKS LL RF  + +     STIGV+F  R++++DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+
Sbjct:    6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI 93          
BLAST of EY684808 vs. ExPASy Swiss-Prot
Match: RB11A_PIG (Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3)

HSP 1 Score: 117.857 bits (294), Expect = 7.847e-26
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 1
Query:  112 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 375
            +EYDYLFK++LIGDS VGKS LL RF  + +     STIGV+F  R++++DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+
Sbjct:    6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI 93          
BLAST of EY684808 vs. ExPASy Swiss-Prot
Match: RB11A_MOUSE (Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3)

HSP 1 Score: 117.857 bits (294), Expect = 7.847e-26
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 1
Query:  112 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 375
            +EYDYLFK++LIGDS VGKS LL RF  + +     STIGV+F  R++++DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+
Sbjct:    6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI 93          
BLAST of EY684808 vs. ExPASy Swiss-Prot
Match: RB11A_HUMAN (Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3)

HSP 1 Score: 117.857 bits (294), Expect = 7.847e-26
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 1
Query:  112 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 375
            +EYDYLFK++LIGDS VGKS LL RF  + +     STIGV+F  R++++DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+
Sbjct:    6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI 93          
BLAST of EY684808 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.847e-26
Identity = 56/95 (58.95%), Postives = 72/95 (75.79%), Query Frame = 1
Query:   91 LPSKIMSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 375
            + SK    EYDYL+K++LIGDS VGKS LL RF  + +     STIGV+F  RT++ +GKTIK Q+WDTAGQER+R ITS+YYRGA G ++VYD+
Sbjct:    1 MTSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDI 95          
BLAST of EY684808 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.847e-26
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 1
Query:  112 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDV 375
            +EYDYLFK++LIGDS VGKS LL RF  + +     STIGV+F  R++++DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+
Sbjct:    6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI 93          
The following BLAST results are available for this feature:
BLAST of EY684808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
RB11B_DISOM7.847e-2663.64Ras-related protein Rab-11B OS=Discopyge ommata PE... [more]
RB11B_BOVIN7.847e-2663.64Ras-related protein Rab-11B OS=Bos taurus GN=RAB11... [more]
RB11A_RAT7.847e-2663.64Ras-related protein Rab-11A OS=Rattus norvegicus G... [more]
RB11A_RABIT7.847e-2663.64Ras-related protein Rab-11A OS=Oryctolagus cunicul... [more]
RB11A_PONAB7.847e-2663.64Ras-related protein Rab-11A OS=Pongo abelii GN=RAB... [more]
RB11A_PIG7.847e-2663.64Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11... [more]
RB11A_MOUSE7.847e-2663.64Ras-related protein Rab-11A OS=Mus musculus GN=Rab... [more]
RB11A_HUMAN7.847e-2663.64Ras-related protein Rab-11A OS=Homo sapiens GN=RAB... [more]
RB11A_DICDI7.847e-2658.95Ras-related protein Rab-11A OS=Dictyostelium disco... [more]
RB11A_CHICK7.847e-2663.64Ras-related protein Rab-11A OS=Gallus gallus GN=RA... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-003-H09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684808 ID=EY684808; Name=EY684808; organism=Citrus sinensis; type=EST; length=873bp
CGACACAGCGCAAACAAACTTTCCCTTTCATTTTCTTTTTCTCTTTCTCG
CTCTCCAAACAGGGCAAACGGACCGTCGCAAGATTCTTTACTTCCATCCA
AAATCATGAGCAACGAATACGACTATCTGTTCAAGCTGTTGCTTATCGGA
GACTCGTCCGTCGGGAAGTCCTGCCTGCTGCTCCGATTTGCTGATGATTC
TTATGTCGACAGCTACATCAGTACCATTGGAGTTGATTTTAAAATAAGAA
CTGTGGAGCTGGATGGGAAGACGATCAAACTGCAGATTTGGGACACTGCT
GGACAGGAGCGATTCAGGACTATAACTAGCAGTTATTACCGAGGAGCCCA
TGGAATCATAATTGTCTATGACGTAACCTGAGATGGACAGCTTCGATAAT
GTCACGCACTGGTTGAATGAGATTGACAGATAGGCAAATGACAGTGAATG
CAAAGTATCTACGTGGGGAAAAAAGGCGATTAGTTGAGAACACGAGGGAC
AGACCGCACCAGCACCCGGGCACTAGCCAGACCCACTGCGCGCGCCATCC
CCTGGTAAAGGAACGCCGAAAATGACAGCACGGGGGGGACGGGGCTCGCC
GCGGGACTCGTGCCCACGGCCACGGGGGCGACGGCACGGGCGCCAACCGC
GGGACCGAGGGACAGAGCGAGACGACAGAGAAGGGCGAGCGCCCACCAGA
ACAAGCGACGACCGGCAGCCCCCGCCCACACAACCCCGGTAGAACAGACG
ACAGACAGACGACCAGGGCAACGACGAAACCCGAACGAAAGATGAAGGCA
GCACAAACACACCAACCTTAACCACAGCACCAATACGCACCAAAGTACAA
CCAAGACAACAGAGGGCAACAGC
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