EY684802

Overview
NameEY684802
Unique NameEY684802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684802 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSJ (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.122e-13
Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 2
Query:   32 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 295
            KK RL+ EQ + LE++F L + L P++K  LA  L L+PRQV +WFQNRRAR K KQ E + + LKR + ++  +   LQ + ++L A
Sbjct:   78 KKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRA 165          
BLAST of EY684802 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSI (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica GN=HOX3 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.122e-13
Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 2
Query:   32 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 295
            KK RL+ EQ + LE++F L + L P++K  LA  L L+PRQV +WFQNRRAR K KQ E + + LKR + ++  +   LQ + ++L A
Sbjct:   78 KKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRA 165          
BLAST of EY684802 vs. ExPASy Swiss-Prot
Match: HAT4_ARATH (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.567e-13
Identity = 40/96 (41.67%), Postives = 57/96 (59.38%), Query Frame = 2
Query:    8 DDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 295
            D+      KK RL+ +Q   LE+ F+  + L P++K  LA+ LGL+ RQV +WFQNRRAR K KQ E D + L+R  E +  +   LQ +  +L A
Sbjct:  121 DEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELRA 216          
BLAST of EY684802 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSJ (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. japonica GN=HOX18 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.270e-13
Identity = 47/111 (42.34%), Postives = 61/111 (54.95%), Query Frame = 2
Query:    8 DDGSQAGE---------KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALK 313
            DDG   G          KK +L  EQ   LE +F + N L   +K +LAR L L+PRQV +WFQNRRAR K KQ E D + LKR         E+L  +N++L  E+M L+
Sbjct:   98 DDGGDGGSGGGGGGGTRKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCC-------ESLTEENKQLKHELMELR 201          
BLAST of EY684802 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSI (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. indica GN=HOX18 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.270e-13
Identity = 47/107 (43.93%), Postives = 62/107 (57.94%), Query Frame = 2
Query:    8 DDGSQAG-----EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALK 313
            D GS +G      KK +L  EQ   LE +F + N L   +K +LAR L L+PRQV +WFQNRRAR K KQ E D + LKR         E+L  +N++L  E+M L+
Sbjct:  102 DGGSGSGGGGGTRKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCC-------ESLTEENKQLKHELMELR 201          
BLAST of EY684802 vs. ExPASy Swiss-Prot
Match: HOX26_ORYSJ (Putative homeobox-leucine zipper protein HOX26 OS=Oryza sativa subsp. japonica GN=HOX26 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.495e-13
Identity = 42/87 (48.28%), Postives = 49/87 (56.32%), Query Frame = 2
Query:   11 DGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQ 271
            D   A  KK RL  EQ   LE +F   N L    K +LA  LGL  RQV +WFQNRRAR K KQ E D DLL+R  + + AD   L+
Sbjct:  110 DEEGASRKKLRLTGEQATLLEDSFRAHNILSHAEKQELAGKLGLSARQVEVWFQNRRARTKLKQTEADCDLLRRWCDHLAADNARLR 196          
BLAST of EY684802 vs. ExPASy Swiss-Prot
Match: ATHB4_ARATH (Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana GN=ATHB-4 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.240e-12
Identity = 41/95 (43.16%), Postives = 59/95 (62.11%), Query Frame = 2
Query:   11 DGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 295
            DGS+   KK RL+ +Q   LE+ F+  + L P++K+ LA+ L L+ RQV +WFQNRRAR K KQ E D + LKR  + +  +   LQ +  +L A
Sbjct:  159 DGSR---KKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRA 250          
BLAST of EY684802 vs. ExPASy Swiss-Prot
Match: ATHBX_ARATH (Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana GN=ATHB-X PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.712e-12
Identity = 41/98 (41.84%), Postives = 56/98 (57.14%), Query Frame = 2
Query:    8 DDGSQAGE--KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 295
            DD +  G   KK RL  EQ   LE++F   + L P++K  LA  L L  RQV +WFQNRRAR K K  E + + LKR + ++K     LQ + ++L A
Sbjct:   59 DDSNSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRA 156          
The following BLAST results are available for this feature:
BLAST of EY684802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
HOX3_ORYSJ1.122e-1345.45Homeobox-leucine zipper protein HOX3 OS=Oryza sati... [more]
HOX3_ORYSI1.122e-1345.45Homeobox-leucine zipper protein HOX3 OS=Oryza sati... [more]
HAT4_ARATH5.567e-1341.67Homeobox-leucine zipper protein HAT4 OS=Arabidopsi... [more]
HOX18_ORYSJ7.270e-1342.34Homeobox-leucine zipper protein HOX18 OS=Oryza sat... [more]
HOX18_ORYSI7.270e-1343.93Homeobox-leucine zipper protein HOX18 OS=Oryza sat... [more]
HOX26_ORYSJ9.495e-1348.28Putative homeobox-leucine zipper protein HOX26 OS=... [more]
ATHB4_ARATH1.240e-1243.16Homeobox-leucine zipper protein ATHB-4 OS=Arabidop... [more]
ATHBX_ARATH4.712e-1241.84Homeobox-leucine zipper protein ATHB-X OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-003-H02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684802 ID=EY684802; Name=EY684802; organism=Citrus sinensis; type=EST; length=850bp
TTTTTCTGATGATGGATCACAAGCAGGAGAGAAGAAGAGGAGGCTTAATA
TGGAACAAGTGAAGACCCTTGAGAAGAACTTTGAATTGGGTAACAAGCTT
GAGCCAGAGAGAAAAATGCAGTTGGCTAGGGCTCTTGGGCTGCAACCAAG
ACAGGTTGCTATTTGGTTCCAAAACAGGAGAGCCAGATGGAAGACCAAGC
AGCTTGAGAAAGACTATGATCTTCTCAAGAGACAATATGAAGCAGTCAAA
GCCGACCGCGAAGCACTCCAAGCTCAAAATCAGAAGCTTCATGCAGAGAT
AATGGCTCTGAAAAGCAGGGAGGTGACTGAATCTATAAACCTCAATAAAG
AAACTGAGGGGTCTTGCAGCAATAGAAGTGAGAACAGTTCTGATATCAAG
TTGGATATTTCAAGGACACCAGCCATTGACAGCCCTATGTCTACTCATCC
AACAAGCAGAAACTTGTTTCCAACAAAATCAACATCGTCGGTAAGGCCAA
CAGTAGCAGCACAACTTTTCCATAACTCATCATCGTCCAGGCCTGATCTT
CCATGCCAGAAGATTGAACAGAATATGCAGGGTACTAAAGATCCAGAAAG
GCCTTTACACCATGTTCCTGTGGCATGGATGATCAATCTGGATTCTGGCC
CTGGTTGGGACCAACACATTTACAACTGAAATTAATCCACATCCACCCCC
AATAAAGCTAGCTGGCAAGATTGGAACTGACCCCTTTCCCTGCTACAGCC
ATGGGCAAATTTAGCTTCACCCAACTTTTCTACAGGACAGGAATGACCAC
CCCACATCCCGGCCCACACCCCACGACCCCCTTCCCACACACGAGCTTCG
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