EY684799

Overview
NameEY684799
Unique NameEY684799
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: CLPB1_ANASP (Chaperone protein clpB 1 OS=Anabaena sp. (strain PCC 7120) GN=clpB1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.499e-14
Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = 2
Query:    8 LDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFYNGQLPQQKLGFTRIDT 322
            L R ++S I+R+QL RV+  + D+K+  +++ AA   L   GYDP YGARP+KR IQ+ +EN LA  IL   F   DTI ID +            K+  T+I T
Sbjct:  776 LSRSEMSHIIRIQLKRVESLLRDQKISFEISPAACDFLVEKGYDPVYGARPLKRAIQREIENPLATKILENTFISGDTIYIDQDENGLSFTNKAPVKVSVTQITT 880          
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: CLPB_BIFLO (Chaperone protein clpB OS=Bifidobacterium longum GN=clpB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14
Identity = 35/83 (42.17%), Postives = 60/83 (72.29%), Query Frame = 2
Query:    5 PLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKDEDTIVID 253
            PL R+++  IV +Q+  V +R+ DR++ + VTD+A + L + GYDP YGARP++R++Q  V ++LA+ +L G+  D DT+++D
Sbjct:  774 PLTREELGGIVDIQVAGVSQRLTDRRITLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVGDQLARMLLAGKVHDGDTVLVD 856          
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: CLPB_BACTN (Chaperone protein clpB OS=Bacteroides thetaiotaomicron GN=clpB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14
Identity = 37/84 (44.05%), Postives = 57/84 (67.86%), Query Frame = 2
Query:    5 PLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKDEDTIVIDT 256
            PL   +I  IV LQ+  VQK +A+  +++++TDAA+  L  +GYDP +GARPVKR IQ+Y+ N+L+K +L  E      I++D+
Sbjct:  770 PLTETEIRQIVLLQIKGVQKMLAENGVELEMTDAALNFLSQVGYDPEFGARPVKRAIQRYLLNDLSKKLLSQEVDRSKAIIVDS 853          
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: CLPB_YERPE (Chaperone protein clpB OS=Yersinia pestis GN=clpB PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.558e-14
Identity = 37/85 (43.53%), Postives = 57/85 (67.06%), Query Frame = 2
Query:    5 PLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 259
            PL R  ++SI  +QL+R+ KR+ +R  ++++T  A++ LG  G+DP YGARP+KR IQQ +EN LA+ IL G+      + +D E
Sbjct:  765 PLGRAHLASIANIQLERLYKRLEERGYEVKITQPALEFLGEAGFDPVYGARPLKRAIQQEIENPLAQQILSGKLIPGIPVTLDVE 849          
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: CLPB_RHIME (Chaperone protein clpB OS=Rhizobium meliloti GN=clpB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.558e-14
Identity = 37/81 (45.68%), Postives = 58/81 (71.60%), Query Frame = 2
Query:    8 LDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKDEDTIVI 250
            L R ++ +IV +QL+R++K ++DRK+ +++ D A   L   GYDP YGARP+KR IQ+YV++ LA+ +L+GEF D   I +
Sbjct:  768 LRRSEMGAIVDIQLERLRKLLSDRKITLELEDDARVFLADRGYDPAYGARPLKRAIQKYVQDPLAEKVLQGEFPDGSVIKV 848          
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: CLPB_THET8 (Chaperone protein clpB OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=clpB PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.340e-14
Identity = 36/83 (43.37%), Postives = 59/83 (71.08%), Query Frame = 2
Query:    5 PLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKDEDTIVID 253
            PL ++QI  IV +QL  ++ R+A++++ +++T+AA   L   GYDP +GARP++RVIQ+ +E  LA+ IL GE K+ D + +D
Sbjct:  756 PLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVD 838          
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: CLPB_THET2 (Chaperone protein clpB OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=clpB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.340e-14
Identity = 36/83 (43.37%), Postives = 59/83 (71.08%), Query Frame = 2
Query:    5 PLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKDEDTIVID 253
            PL ++QI  IV +QL  ++ R+A++++ +++T+AA   L   GYDP +GARP++RVIQ+ +E  LA+ IL GE K+ D + +D
Sbjct:  756 PLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVD 838          
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: CLPB_NEIMB (Chaperone protein clpB OS=Neisseria meningitidis serogroup B GN=clpB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.340e-14
Identity = 34/84 (40.48%), Postives = 57/84 (67.86%), Query Frame = 2
Query:    8 LDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 259
            LD+D I +I ++QL  ++KR+  + +++ V+DAA+ ++   G+DP YGARP+KR IQ  +EN LAK +L G +  E  I ++ +
Sbjct:  769 LDQDNIRNIAKIQLKGLEKRLEKQNLRLAVSDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEAD 852          
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: CLPB_MEIRU (Chaperone protein clpB OS=Meiothermus ruber GN=clpB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.340e-14
Identity = 36/76 (47.37%), Postives = 58/76 (76.32%), Query Frame = 2
Query:    5 PLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKD 232
            PL R+QI++IV++QL+ V+KR+A+R++ ++++  A+  L   GYDP +GARP+KRVIQ+ +E  L++ IL GE  D
Sbjct:  756 PLAREQIAAIVQIQLEAVRKRLAERRITLELSQEALDFLAQRGYDPVFGARPLKRVIQRELETPLSRKILAGEVAD 831          
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: CLPB_STRCO (Chaperone protein clpB OS=Streptomyces coelicolor GN=clpB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.363e-14
Identity = 35/82 (42.68%), Postives = 59/82 (71.95%), Query Frame = 2
Query:    8 LDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKDEDTIVID 253
            L ++++S I RLQ++ + +R+A+R++ ++VTD A+  L   G DP YGARP++R++Q  + + LA+ IL GE KD DT+ +D
Sbjct:  768 LSQEELSRIARLQINGLARRLAERRLTLEVTDEALAWLAEEGNDPAYGARPLRRLVQTAIGDRLAREILSGEIKDGDTVRVD 849          
The following BLAST results are available for this feature:
BLAST of EY684799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
CLPB1_ANASP1.499e-1440.95Chaperone protein clpB 1 OS=Anabaena sp. (strain P... [more]
CLPB_BIFLO1.958e-1442.17Chaperone protein clpB OS=Bifidobacterium longum G... [more]
CLPB_BACTN1.958e-1444.05Chaperone protein clpB OS=Bacteroides thetaiotaomi... [more]
CLPB_YERPE2.558e-1443.53Chaperone protein clpB OS=Yersinia pestis GN=clpB ... [more]
CLPB_RHIME2.558e-1445.68Chaperone protein clpB OS=Rhizobium meliloti GN=cl... [more]
CLPB_THET83.340e-1443.37Chaperone protein clpB OS=Thermus thermophilus (st... [more]
CLPB_THET23.340e-1443.37Chaperone protein clpB OS=Thermus thermophilus (st... [more]
CLPB_NEIMB3.340e-1440.48Chaperone protein clpB OS=Neisseria meningitidis s... [more]
CLPB_MEIRU3.340e-1447.37Chaperone protein clpB OS=Meiothermus ruber GN=clp... [more]
CLPB_STRCO4.363e-1442.68Chaperone protein clpB OS=Streptomyces coelicolor ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-003-G10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684799 ID=EY684799; Name=EY684799; organism=Citrus sinensis; type=EST; length=917bp
TCCACCACTGGACCGTGACCAGATAAGCAGTATTGTGAGGTTACAGTTGG
ATCGGGTGCAGAAGAGGATTGCAGACCGGAAGATGAAAATGCAAGTGACC
GATGCAGCTATTCAGCTCCTTGGGAGTCTTGGGTATGACCCCAACTATGG
TGCAAGGCCGGTCAAGAGAGTGATTCAGCAGTACGTTGAAAATGAGCTTG
CCAAGGGCATTCTGAGAGGGGAGTTCAAGGATGAAGACACAATTGTAATA
GACACTGAAGTTACAGCATTTTACAATGGCCAGCTTCCCCAGCAAAAGCT
AGGCTTCACGAGAATTGATACCAGATCGGATGCTCCTGCCTGAGATAATC
ACAACCCTTTCTCACACAGCCCACAAGCCCCGCAGCGATGCGGCGACGGG
CGGGGAACACATAACTACGACACCAACACCCGACCAAAAACGAACCATAA
GCAAAGCAAACAGGACACACGAACGCGAGAACCCGCGAAGCCAACTGCAC
GCACAAGCGGAGGCGAACACGCACCGCCGCACACGGAGCGCGGCCACCCC
GCCACCGACAACCCGCCGACGACGACCACCCCACCCACAAACACCGCCCA
ACCACACAAGAACAAAAAACAAAAACAACCAACAAACCACACACCAACCA
AGGGACCCCTCCAGAGACAATCATACTCCGGACACAGACCGCACCAACAC
GTCACGCAGCCCCACACACGACCAAAGACGACCACACACGCGCACCCCAC
CCAACTCCAATCAACACCGCCAACGACGCACGCCGCAGGGAACAACACAA
CACGGCAAACCCACCAACAACCCCCGACCACACACGCCGCCCTCGGACCA
CAGCACGAAAAAACAAAACACCACCCACGCCGCCCCCCCAAACACCACCC
TCGACAAACCAGACGCA
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