EY684799

Overview
NameEY684799
Unique NameEY684799
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: HS101_ARATH (Heat shock protein 101 OS=Arabidopsis thaliana GN=HSP101 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12
Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 2
Query:    5 PLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKDEDTIVID 253
            PL  DQ+  + RLQ+  V  R+A+R + + VTDAA+  + +  YDP YGARP++R +++ V  EL+K ++R E  +  T+ ID
Sbjct:  767 PLSHDQLRKVARLQMKDVAVRLAERGVALAVTDAALDYILAESYDPVYGARPIRRWMEKKVVTELSKMVVREEIDENSTVYID 849          
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: CLPB_HAEDU (Chaperone protein clpB OS=Haemophilus ducreyi GN=clpB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12
Identity = 33/83 (39.76%), Postives = 55/83 (66.27%), Query Frame = 2
Query:    5 PLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKDEDTIVID 253
            PLD+  I +I  +QL R+ +R+A+R  ++ ++D A+  +   G+D  +GARP+KR IQQ +EN LA+ IL G+    + ++ID
Sbjct:  764 PLDQQHIRAIANIQLQRLIRRLAERGYQVTISDTALDHISQAGFDSLFGARPLKRAIQQELENPLAQQILSGKLLPNNPVIID 846          
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: CLPB_BRUSU (Chaperone protein clpB OS=Brucella suis GN=clpB PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12
Identity = 36/81 (44.44%), Postives = 56/81 (69.14%), Query Frame = 2
Query:    8 LDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKDEDTIVI 250
            L R+ + +IV +Q+ R+Q  ++DRK+ +Q+ D A + L + GYDP YGARP+KRVIQ+ V++ LA+ IL G+  D   + I
Sbjct:  766 LRREDMGAIVDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERILLGDILDGSLVKI 846          
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: CLPB_BRUME (Chaperone protein clpB OS=Brucella melitensis GN=clpB PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12
Identity = 36/81 (44.44%), Postives = 56/81 (69.14%), Query Frame = 2
Query:    8 LDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKDEDTIVI 250
            L R+ + +IV +Q+ R+Q  ++DRK+ +Q+ D A + L + GYDP YGARP+KRVIQ+ V++ LA+ IL G+  D   + I
Sbjct:  766 LRREDMGAIVDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERILLGDILDGSLVKI 846          
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: CLPB_TREPA (Chaperone protein clpB OS=Treponema pallidum GN=clpB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.333e-12
Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 2
Query:    8 LDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKDEDTIVID 253
            L R  I  I  +QL  V +R+  R +K++V DAA   L   GYD  +GARP+KR IQ  +EN LA+ IL G F+   TIV+D
Sbjct:  784 LTRKHIRLITDIQLQMVVERLESRHIKLRVRDAAKAYLAERGYDDTFGARPLKRAIQTELENALAREILSGRFRGGSTIVVD 865          
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: CLPB_MYCPA (Chaperone protein clpB OS=Mycobacterium paratuberculosis GN=clpB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.965e-12
Identity = 33/82 (40.24%), Postives = 58/82 (70.73%), Query Frame = 2
Query:    8 LDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKDEDTIVID 253
            L+  ++  IV +QL ++QKR+A R++ ++V+  A Q L   G+DP YGARP++R++QQ + ++LAK +L G+  D DT+ ++
Sbjct:  756 LEPGELVQIVDIQLAQLQKRLAQRRLTLEVSLPAKQWLAHRGFDPVYGARPLRRLVQQAIGDQLAKQLLAGQVHDGDTVPVN 837          
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: CLPB_CLOPE (Chaperone protein clpB OS=Clostridium perfringens GN=clpB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.965e-12
Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = 2
Query:    5 PLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKDEDTIVID 253
            PL  + I  I+ + L  V+ R+ +R + ++VTD A ++L   GYDP YGARP+KR I   +E E+AK I+ GE  D    +ID
Sbjct:  773 PLSSEGIKKIIDIFLRDVENRLRERNITLEVTDRAKEILAEEGYDPVYGARPLKRYISNVLETEIAKKIIAGEIYDGSVALID 855          
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: HSP98_NEUCR (Heat shock protein hsp98 OS=Neurospora crassa GN=hsp98 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12
Identity = 40/95 (42.11%), Postives = 61/95 (64.21%), Query Frame = 2
Query:    8 LDRDQISSIVRLQLDRVQKRIAD--RKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKDED---TIVIDTEVTAFYN 277
            L R +I  IV L++  +QKR+ D  R +K++V++ A   LG+LGY P YGARP++RV+++ V N LA  ILRG  +D +    +V D ++T   N
Sbjct:  798 LTRREIRKIVELRIAEIQKRLQDNDRNVKIEVSEEAKDKLGALGYSPAYGARPLQRVLEKEVLNRLAVLILRGSIRDGEVARVVVQDGKITVLPN 892          
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: CLPB_RICFE (Chaperone protein clpB OS=Rickettsia felis GN=clpB PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12
Identity = 33/84 (39.29%), Postives = 57/84 (67.86%), Query Frame = 2
Query:    8 LDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 259
            L+R+ I  IV++QL+ ++K +  + + ++  ++A+  L   GYDP++GARP+KR+IQ+ ++N LAK IL GE    +T+ I  E
Sbjct:  765 LNRNNIHDIVKIQLESLKKILLAQNILLEFDESALNYLAEKGYDPSFGARPLKRLIQREIQNNLAKMILAGEISSGNTVKIARE 848          
BLAST of EY684799 vs. ExPASy Swiss-Prot
Match: CLPB_BACAN (Chaperone protein clpB OS=Bacillus anthracis GN=clpB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12
Identity = 33/85 (38.82%), Postives = 55/85 (64.71%), Query Frame = 2
Query:    5 PLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGARPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 259
            PL  ++I  IV   +  +Q R+ADR + +++T+AA + +   G+DP YGARP+KR +Q+ VE +LA+ ++ G   D   +V+D E
Sbjct:  773 PLTTNEIKGIVDKIVKELQGRLADRHITVKLTEAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVE 857          
The following BLAST results are available for this feature:
BLAST of EY684799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
HS101_ARATH4.083e-1240.96Heat shock protein 101 OS=Arabidopsis thaliana GN=... [more]
CLPB_HAEDU4.083e-1239.76Chaperone protein clpB OS=Haemophilus ducreyi GN=c... [more]
CLPB_BRUSU4.083e-1244.44Chaperone protein clpB OS=Brucella suis GN=clpB PE... [more]
CLPB_BRUME4.083e-1244.44Chaperone protein clpB OS=Brucella melitensis GN=c... [more]
CLPB_TREPA5.333e-1246.34Chaperone protein clpB OS=Treponema pallidum GN=cl... [more]
CLPB_MYCPA6.965e-1240.24Chaperone protein clpB OS=Mycobacterium paratuberc... [more]
CLPB_CLOPE6.965e-1242.17Chaperone protein clpB OS=Clostridium perfringens ... [more]
HSP98_NEUCR9.097e-1242.11Heat shock protein hsp98 OS=Neurospora crassa GN=h... [more]
CLPB_RICFE9.097e-1239.29Chaperone protein clpB OS=Rickettsia felis GN=clpB... [more]
CLPB_BACAN9.097e-1238.82Chaperone protein clpB OS=Bacillus anthracis GN=cl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-003-G10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684799 ID=EY684799; Name=EY684799; organism=Citrus sinensis; type=EST; length=917bp
TCCACCACTGGACCGTGACCAGATAAGCAGTATTGTGAGGTTACAGTTGG
ATCGGGTGCAGAAGAGGATTGCAGACCGGAAGATGAAAATGCAAGTGACC
GATGCAGCTATTCAGCTCCTTGGGAGTCTTGGGTATGACCCCAACTATGG
TGCAAGGCCGGTCAAGAGAGTGATTCAGCAGTACGTTGAAAATGAGCTTG
CCAAGGGCATTCTGAGAGGGGAGTTCAAGGATGAAGACACAATTGTAATA
GACACTGAAGTTACAGCATTTTACAATGGCCAGCTTCCCCAGCAAAAGCT
AGGCTTCACGAGAATTGATACCAGATCGGATGCTCCTGCCTGAGATAATC
ACAACCCTTTCTCACACAGCCCACAAGCCCCGCAGCGATGCGGCGACGGG
CGGGGAACACATAACTACGACACCAACACCCGACCAAAAACGAACCATAA
GCAAAGCAAACAGGACACACGAACGCGAGAACCCGCGAAGCCAACTGCAC
GCACAAGCGGAGGCGAACACGCACCGCCGCACACGGAGCGCGGCCACCCC
GCCACCGACAACCCGCCGACGACGACCACCCCACCCACAAACACCGCCCA
ACCACACAAGAACAAAAAACAAAAACAACCAACAAACCACACACCAACCA
AGGGACCCCTCCAGAGACAATCATACTCCGGACACAGACCGCACCAACAC
GTCACGCAGCCCCACACACGACCAAAGACGACCACACACGCGCACCCCAC
CCAACTCCAATCAACACCGCCAACGACGCACGCCGCAGGGAACAACACAA
CACGGCAAACCCACCAACAACCCCCGACCACACACGCCGCCCTCGGACCA
CAGCACGAAAAAACAAAACACCACCCACGCCGCCCCCCCAAACACCACCC
TCGACAAACCAGACGCA
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