EY684795

Overview
NameEY684795
Unique NameEY684795
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACT2_PEA (Actin-2 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 9.492e-80
Identity = 162/221 (73.30%), Postives = 171/221 (77.38%), Query Frame = 2
Query:  107 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            MAD EDIQPLVCDNGTGMVKAGFAGDDA RAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P  YV +  +  LSLYASGRTTG +VL    G  H  P+ +            L GR LT    K+LT  GY++    E  R   R+ KE
Sbjct:    1 MADAEDIQPLVCDNGTGMVKAGFAGDDA-RAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI--QAVLSLYASGRTTG-IVLESGDGVSHTVPIYEGYALPHAILRLDLAGRDLTESLMKILTERGYMFTTSAE--REIVRDIKE 215          
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACT2_ARATH (Actin-2 OS=Arabidopsis thaliana GN=ACT2 PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.762e-79
Identity = 158/223 (70.85%), Postives = 176/223 (78.92%), Query Frame = 2
Query:  107 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYP--NGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            MA+ +DIQP+VCDNGTGMVKAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKDAYVGDEAQSKRGILTLKYPIEHG+VSNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFN+P  YV +  +  LSLYASGRTTG +VL+   G  H  P+   + F LP+      L GR LT    K+LT  GY++    E  R   R+ KE
Sbjct:    1 MAEADDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI--QAVLSLYASGRTTG-IVLDSGDGVSHTVPI--YEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAE--REIVRDIKE 216          
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACT7_ORYSJ (Actin-7 OS=Oryza sativa subsp. japonica GN=ACT7 PE=3 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 6.153e-79
Identity = 160/219 (73.06%), Postives = 173/219 (79.00%), Query Frame = 2
Query:  119 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYP--NGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            EDIQP+VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP+NPKANREKMTQIMFETFN P  YV +  +  LSLYASGRTTG +VL+   G  H  P+   + F LP+      L GR LT    K+LT  GY +    E  R   R+ KE
Sbjct:    4 EDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKANREKMTQIMFETFNCPAMYVAI--QAVLSLYASGRTTG-IVLDSGDGVSHTVPI--YEGFTLPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAE--REIVRDIKE 215          
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACT7_ORYSI (Actin-7 OS=Oryza sativa subsp. indica GN=ACT7 PE=3 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 6.153e-79
Identity = 160/219 (73.06%), Postives = 173/219 (79.00%), Query Frame = 2
Query:  119 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYP--NGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            EDIQP+VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP+NPKANREKMTQIMFETFN P  YV +  +  LSLYASGRTTG +VL+   G  H  P+   + F LP+      L GR LT    K+LT  GY +    E  R   R+ KE
Sbjct:    4 EDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKANREKMTQIMFETFNCPAMYVAI--QAVLSLYASGRTTG-IVLDSGDGVSHTVPI--YEGFTLPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAE--REIVRDIKE 215          
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACT2_DAUCA (Actin-2 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 8.036e-79
Identity = 159/207 (76.81%), Postives = 166/207 (80.19%), Query Frame = 2
Query:  107 MADT-EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIV-GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLY 718
            MAD  EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIV GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKI HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P  YV    R CLSLYASGRTTG +VL+   G  H  P+ +            L GR LT    K+LT  GY++
Sbjct:    1 MADGGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKISHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVLSRLRSCLSLYASGRTTG-IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDGLMKILTERGYMF 206          
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACT6_SOLTU (Actin-71 OS=Solanum tuberosum GN=AC71 PE=3 SV=2)

HSP 1 Score: 293.508 bits (750), Expect = 1.049e-78
Identity = 155/210 (73.81%), Postives = 164/210 (78.10%), Query Frame = 2
Query:  107 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPE 733
            MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDAYV DEAQSKRGILTLKYP EHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P  YV +  +  LSLYASGRTTG +VL+   G  H  P+ +            L GR LT    K+LT  GY +    E
Sbjct:    1 MADVEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHAGVMVGMGQKDAYVVDEAQSKRGILTLKYPXEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAI--QAVLSLYASGRTTG-IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYMVKILTERGYSFTTTAE 207          
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACT_COLSC (Actin OS=Coleochaete scutata PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 5.759e-77
Identity = 155/221 (70.14%), Postives = 169/221 (76.47%), Query Frame = 2
Query:  107 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            MAD E++  LVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF+ P  YV +  +  LSLYASGRTTG +VL+   G  H  P+ +            L GR LT    K+LT  GY +    E  R   R+ KE
Sbjct:    1 MADGEEVSALVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFSVPAMYVAI--QAVLSLYASGRTTG-IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYAFTTTAE--REIVRDIKE 216          
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACT22_DICDI (Putative actin-22 OS=Dictyostelium discoideum GN=act22 PE=3 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.188e-76
Identity = 154/219 (70.32%), Postives = 168/219 (76.71%), Query Frame = 2
Query:  113 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP  YV +  +  LSLYASGRTTG +V++   G  H  P+ +            L GR LT    K+LT  GY +    E  R   R+ KE
Sbjct:    2 DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI--QAVLSLYASGRTTG-IVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYSFTTTAE--REIVRDIKE 215          
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACT1_DICDI (Major actin OS=Dictyostelium discoideum GN=act1 PE=1 SV=2)

HSP 1 Score: 285.804 bits (730), Expect = 2.188e-76
Identity = 154/219 (70.32%), Postives = 168/219 (76.71%), Query Frame = 2
Query:  113 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP  YV +  +  LSLYASGRTTG +V++   G  H  P+ +            L GR LT    K+LT  GY +    E  R   R+ KE
Sbjct:    2 DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI--QAVLSLYASGRTTG-IVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYSFTTTAE--REIVRDIKE 215          
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACT_MESVI (Actin OS=Mesostigma viride PE=3 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 2.858e-76
Identity = 154/221 (69.68%), Postives = 168/221 (76.02%), Query Frame = 2
Query:  107 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            MAD  ++  L+CDNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P  YV +  +  LSLYASGRTTG +VL+   G  H  P+ +            L GR LT    K+LT  GY +    E  R   R+ KE
Sbjct:    1 MADEGEVSALMCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI--QAVLSLYASGRTTG-IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE--REIVRDIKE 216          
The following BLAST results are available for this feature:
BLAST of EY684795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 443
Match NameE-valueIdentityDescription
ACT2_PEA9.492e-8073.30Actin-2 OS=Pisum sativum PE=2 SV=1[more]
ACT2_ARATH2.762e-7970.85Actin-2 OS=Arabidopsis thaliana GN=ACT2 PE=1 SV=1[more]
ACT7_ORYSJ6.153e-7973.06Actin-7 OS=Oryza sativa subsp. japonica GN=ACT7 PE... [more]
ACT7_ORYSI6.153e-7973.06Actin-7 OS=Oryza sativa subsp. indica GN=ACT7 PE=3... [more]
ACT2_DAUCA8.036e-7976.81Actin-2 OS=Daucus carota PE=2 SV=1[more]
ACT6_SOLTU1.049e-7873.81Actin-71 OS=Solanum tuberosum GN=AC71 PE=3 SV=2[more]
ACT_COLSC5.759e-7770.14Actin OS=Coleochaete scutata PE=2 SV=1[more]
ACT22_DICDI2.188e-7670.32Putative actin-22 OS=Dictyostelium discoideum GN=a... [more]
ACT1_DICDI2.188e-7670.32Major actin OS=Dictyostelium discoideum GN=act1 PE... [more]
ACT_MESVI2.858e-7669.68Actin OS=Mesostigma viride PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-003-G05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684795 ID=EY684795; Name=EY684795; organism=Citrus sinensis; type=EST; length=878bp
GGTAGCTTAACGCACAGCGCAAAGTCCGTTAGTGAGAGAGAGAATCAGAA
CAGAAACAAAAGGAAGAAAAAAAAATTATTTTTTTTTAGAAATTCGAAGT
TAGAAAATGGCAGATACTGAGGATATTCAGCCTCTTGTTTGTGACAATGG
GACTGGAATGGTGAAGGCTGGATTTGCTGGAGATGATGCTCCAAGAGCTG
TGTTCCCCAGCATTGTGGGTCGCCCTCGCCACACTGGAGTTATGGTTGGT
ATGGGTCAGAAAGATGCCTATGTTGGTGATGAGGCTCAATCCAAAAGAGG
TATTTTGACTTTGAAATACCCAATCGAGCATGGCATTGTTAGCAACTGGG
ACGATATGGAGAAAATCTGGCATCACACATTTTATAATGAGCTTCGTGTG
GCTCCGGAAGAGCATCCGGTTCTTCTCACTGAGGCTCCCCTTAATCCGAA
GGCCAATCGTGAGAAGATGACACAGATTATGTTTGAGACCTTTAACACCC
CCTGCTATGTATGTTTGCTATCCAGGCTGTGCCTTTCTCTCTATGCTAGC
GGTCGTACAACTGGGTATTTGGTCTTGAATCTGGAAATGGGGCCCCCACA
CAGATCCCCTCTATGAAAAAGTAAGCCCTTCCACCTGCCATACCCCAATG
GAACCTTGCCAGGGCGGCAACTTACCAGACCCCCTCATAAACTACTGACC
GTACCGGGATACCTCTATCTCCCCCCCCCTGAGCTGAAGCGAGCTAAGAA
AAGAAATGCCAAGGAAACGAAGACGAAAAGCGGCGGACCGGGCAGCGACG
CACAAAAAAGGACCCCCTACCCCTACCTCCCCACCCAGAGAACAACACAG
GAACAAGCGCCTGTCCACCAGAGAATAA
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