EY684795

Overview
NameEY684795
Unique NameEY684795
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACT_VOLCA (Actin OS=Volvox carteri PE=3 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 5.390e-75
Identity = 151/221 (68.33%), Postives = 168/221 (76.02%), Query Frame = 2
Query:  107 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            MA+  ++  LVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSKRGILTL+YPIEHGIV+NWDDMEKIWHHTF+NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P  YV +  +  LSLYASGRTTG +VL+   G  H  P+ +            L GR LT    K+L   GY +    E  R   R+ KE
Sbjct:    1 MAEEGEVSALVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFFNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI--QAVLSLYASGRTTG-IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILMERGYSFTTTAE--REIVRDIKE 216          
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACT2_MOLOC (Actin, muscle-type OS=Molgula oculata PE=3 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 5.390e-75
Identity = 153/222 (68.92%), Postives = 169/222 (76.13%), Query Frame = 2
Query:  107 MADTEDIQP-LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            M D E+ Q  LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P  YV +  +  LSLYASGRTTG +VL+   G  H  P+ +            L GR LT    K+LT  GY ++   E  R   R+ KE
Sbjct:    1 MEDEEEEQTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI--QAVLSLYASGRTTG-IVLDSGDGVSHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAE--REIVRDIKE 217          
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACTM_BRAFL (Actin, muscle OS=Branchiostoma floridae PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 7.040e-75
Identity = 146/219 (66.67%), Postives = 169/219 (77.17%), Query Frame = 2
Query:  113 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            + E+  PLVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDAYVGDEAQSKRGILTLKYP+EHGIV+NWDDMEK+WHHTFYNELR+APEE+P LLTEAPLNPKANREKMTQIMFETFN+P  YVC+ + LC  LYASGRTTG +VL+   G  H  P+ +            L GR+LT    +++   GY ++   E  R   R+ KE
Sbjct:    4 EEEEATPLVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDAYVGDEAQSKRGILTLKYPVEHGIVTNWDDMEKVWHHTFYNELRIAPEENPCLLTEAPLNPKANREKMTQIMFETFNSPAMYVCIQAVLC--LYASGRTTG-IVLDSGDGVSHTVPIYEGYAMPHAILRLDLAGRELTNYLMRVMCDRGYAFVTTAE--REIVRDIKE 217          
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACTM_BRABE (Actin, muscle OS=Branchiostoma belcheri PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 7.040e-75
Identity = 146/219 (66.67%), Postives = 169/219 (77.17%), Query Frame = 2
Query:  113 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            + E+  PLVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDAYVGDEAQSKRGILTLKYP+EHGIV+NWDDMEK+WHHTFYNELR+APEE+P LLTEAPLNPKANREKMTQIMFETFN+P  YVC+ + LC  LYASGRTTG +VL+   G  H  P+ +            L GR+LT    +++   GY ++   E  R   R+ KE
Sbjct:    5 EEEEATPLVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDAYVGDEAQSKRGILTLKYPVEHGIVTNWDDMEKVWHHTFYNELRIAPEENPCLLTEAPLNPKANREKMTQIMFETFNSPAMYVCIQAVLC--LYASGRTTG-IVLDSGDGVSHTVPIYEGYAMPHAILRLDLAGRELTNYLMRVMCDRGYAFVTTAE--REIVRDIKE 218          
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACT3_DICDI (Actin-3 OS=Dictyostelium discoideum GN=act3 PE=3 SV=3)

HSP 1 Score: 280.796 bits (717), Expect = 7.040e-75
Identity = 151/221 (68.33%), Postives = 173/221 (78.28%), Query Frame = 2
Query:  113 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYP--NGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            ++ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPR+TGVMVGMGQKD+Y+GDEAQS++GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP  YV +  +  LSLYASGRTTG +V++   G  H  P+   + + LP+      L GR LT    K+LT  GY +    E  R   R+ KE
Sbjct:    2 ESEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRYTGVMVGMGQKDSYIGDEAQSRKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI--QAVLSLYASGRTTG-IVMDSGDGVSHTVPI--YEGYSLPHAILRLDLAGRDLTDYMMKILTERGYSFTTTAE--REIVRDIKE 215          
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACT2_SCHMA (Actin-2 OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 7.040e-75
Identity = 155/221 (70.14%), Postives = 169/221 (76.47%), Query Frame = 2
Query:  107 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            MAD E++Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP  YV +  +  LSLYASGRTTG +VL+   G  H  P+ +            L GR LT    K+LT  GY +    E  R   R+ KE
Sbjct:    1 MAD-EEVQALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGI--QAVLSLYASGRTTG-IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE--REIVRDIKE 215          
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACTSB_TAKRU (Actin, alpha skeletal muscle B OS=Takifugu rubripes GN=acta1b PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 9.194e-75
Identity = 149/221 (67.42%), Postives = 167/221 (75.57%), Query Frame = 2
Query:  107 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            M D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN P  YV +  +  LSLYASGRTTG +VL+   G  H  P+ +            L GR LT    K+LT  GY ++   E  R   R+ KE
Sbjct:    1 MCDDDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI--QAVLSLYASGRTTG-IVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAE--REIVRDIKE 216          
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACTM_MOLOC (Actin, larval muscle-type OS=Molgula oculata PE=3 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 9.194e-75
Identity = 144/209 (68.90%), Postives = 162/209 (77.51%), Query Frame = 2
Query:  110 ADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPE 733
            ++ ED   +VCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELR+APEEHP LLTEAPLNPKANREKMTQIMFETFN P  YV +  +  LSLYASGRTTG +VL+   G  H  P+ +            L GR LT    K+LT  GY ++   E
Sbjct:    3 SEEEDQTAIVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRIAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI--QAVLSLYASGRTTG-IVLDSGDGISHNVPIYEGYALPHAIARMDLAGRDLTEYLTKILTERGYSFVTTAE 208          
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACTC_BIOTE (Actin, cytoplasmic OS=Biomphalaria tenagophila PE=3 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 9.194e-75
Identity = 152/217 (70.05%), Postives = 165/217 (76.04%), Query Frame = 2
Query:  119 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP  YV +  +  LSLYASGRTTG +VL+   G  H  P+ +            L GR LT    K+LT  GY +    E  R   R+ KE
Sbjct:    4 EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI--QAVLSLYASGRTTG-IVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAE--REIVRDIKE 215          
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACTC_BIOPF (Actin, cytoplasmic OS=Biomphalaria pfeifferi PE=3 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 9.194e-75
Identity = 152/217 (70.05%), Postives = 165/217 (76.04%), Query Frame = 2
Query:  119 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP  YV +  +  LSLYASGRTTG +VL+   G  H  P+ +            L GR LT    K+LT  GY +    E  R   R+ KE
Sbjct:    4 EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI--QAVLSLYASGRTTG-IVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAE--REIVRDIKE 215          
The following BLAST results are available for this feature:
BLAST of EY684795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 443
Match NameE-valueIdentityDescription
ACT_VOLCA5.390e-7568.33Actin OS=Volvox carteri PE=3 SV=1[more]
ACT2_MOLOC5.390e-7568.92Actin, muscle-type OS=Molgula oculata PE=3 SV=1[more]
ACTM_BRAFL7.040e-7566.67Actin, muscle OS=Branchiostoma floridae PE=2 SV=1[more]
ACTM_BRABE7.040e-7566.67Actin, muscle OS=Branchiostoma belcheri PE=2 SV=1[more]
ACT3_DICDI7.040e-7568.33Actin-3 OS=Dictyostelium discoideum GN=act3 PE=3 S... [more]
ACT2_SCHMA7.040e-7570.14Actin-2 OS=Schistosoma mansoni PE=2 SV=1[more]
ACTSB_TAKRU9.194e-7567.42Actin, alpha skeletal muscle B OS=Takifugu rubripe... [more]
ACTM_MOLOC9.194e-7568.90Actin, larval muscle-type OS=Molgula oculata PE=3 ... [more]
ACTC_BIOTE9.194e-7570.05Actin, cytoplasmic OS=Biomphalaria tenagophila PE=... [more]
ACTC_BIOPF9.194e-7570.05Actin, cytoplasmic OS=Biomphalaria pfeifferi PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-003-G05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684795 ID=EY684795; Name=EY684795; organism=Citrus sinensis; type=EST; length=878bp
GGTAGCTTAACGCACAGCGCAAAGTCCGTTAGTGAGAGAGAGAATCAGAA
CAGAAACAAAAGGAAGAAAAAAAAATTATTTTTTTTTAGAAATTCGAAGT
TAGAAAATGGCAGATACTGAGGATATTCAGCCTCTTGTTTGTGACAATGG
GACTGGAATGGTGAAGGCTGGATTTGCTGGAGATGATGCTCCAAGAGCTG
TGTTCCCCAGCATTGTGGGTCGCCCTCGCCACACTGGAGTTATGGTTGGT
ATGGGTCAGAAAGATGCCTATGTTGGTGATGAGGCTCAATCCAAAAGAGG
TATTTTGACTTTGAAATACCCAATCGAGCATGGCATTGTTAGCAACTGGG
ACGATATGGAGAAAATCTGGCATCACACATTTTATAATGAGCTTCGTGTG
GCTCCGGAAGAGCATCCGGTTCTTCTCACTGAGGCTCCCCTTAATCCGAA
GGCCAATCGTGAGAAGATGACACAGATTATGTTTGAGACCTTTAACACCC
CCTGCTATGTATGTTTGCTATCCAGGCTGTGCCTTTCTCTCTATGCTAGC
GGTCGTACAACTGGGTATTTGGTCTTGAATCTGGAAATGGGGCCCCCACA
CAGATCCCCTCTATGAAAAAGTAAGCCCTTCCACCTGCCATACCCCAATG
GAACCTTGCCAGGGCGGCAACTTACCAGACCCCCTCATAAACTACTGACC
GTACCGGGATACCTCTATCTCCCCCCCCCTGAGCTGAAGCGAGCTAAGAA
AAGAAATGCCAAGGAAACGAAGACGAAAAGCGGCGGACCGGGCAGCGACG
CACAAAAAAGGACCCCCTACCCCTACCTCCCCACCCAGAGAACAACACAG
GAACAAGCGCCTGTCCACCAGAGAATAA
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