EY684795

Overview
NameEY684795
Unique NameEY684795
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACTB_XENBO (Actin, cytoplasmic 1 OS=Xenopus borealis GN=actb PE=3 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.568e-74
Identity = 154/221 (69.68%), Postives = 168/221 (76.02%), Query Frame = 2 
Query:  107 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            MAD +DI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP  YV +  +  LSLYASGRTTG +V++   G  H  P+ +            L GR LT    K+LT  GY +    E  R   R+ KE
Sbjct:    1 MAD-DDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI--QAVLSLYASGRTTG-IVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE--REIVRDIKE 215
[Close]
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACT2_HALRO (Actin, muscle 2/4/4A OS=Halocynthia roretzi GN=MA2 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.568e-74
Identity = 148/217 (68.20%), Postives = 165/217 (76.04%), Query Frame = 2 
Query:  119 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            ED   +VCDNG+G+VK+GFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN P  YV +  +  LSLYASGRTTG +VL+   G  H  P+ +            L GR LT    K+LT  GY ++   E  R   R+ KE
Sbjct:    6 EDTTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI--QAVLSLYASGRTTG-IVLDAGDGVSHNVPIYEGYALPHAIARLDLAGRDLTDYLMKILTERGYSFVTTAE--REIVRDIKE 217
[Close]
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACT1_DIPDE (Actin-1/4 OS=Diphyllobothrium dendriticum GN=ACT1 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.568e-74
Identity = 152/217 (70.05%), Postives = 166/217 (76.50%), Query Frame = 2 
Query:  119 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            E++Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP  YV +  +  LSLYASGRTTG +VL+   G  H  P+ +            L GR LT    K+LT  GY +    E  R   R+ KE
Sbjct:    4 EEVQALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGI--QAVLSLYASGRTTG-IVLDSGDGVTHSVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE--REIVRDIKE 215
[Close]
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACT_CRAGI (Actin OS=Crassostrea gigas PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 2.048e-74
Identity = 152/217 (70.05%), Postives = 165/217 (76.04%), Query Frame = 2 
Query:  119 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            EDI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P  YV +  +  LSLYASGRTTG +VL+   G  H  P+ +            L GR LT    K+LT  GY +    E  R   R+ KE
Sbjct:    4 EDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI--QAVLSLYASGRTTG-IVLDSGDGVSHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAE--REIVRDIKE 215
[Close]
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACTA_RAT (Actin, aortic smooth muscle OS=Rattus norvegicus GN=Acta2 PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 2.048e-74
Identity = 149/221 (67.42%), Postives = 166/221 (75.11%), Query Frame = 2 
Query:  107 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            M + ED   LVCDNG+G+ KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN P  YV +  +  LSLYASGRTTG +VL+   G  H  P+ +            L GR LT    K+LT  GY ++   E  R   R+ KE
Sbjct:    1 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI--QAVLSLYASGRTTG-IVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAE--REIVRDIKE 216
[Close]
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACTA_RABIT (Actin, aortic smooth muscle OS=Oryctolagus cuniculus GN=ACTA2 PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 2.048e-74
Identity = 149/221 (67.42%), Postives = 166/221 (75.11%), Query Frame = 2 
Query:  107 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            M + ED   LVCDNG+G+ KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN P  YV +  +  LSLYASGRTTG +VL+   G  H  P+ +            L GR LT    K+LT  GY ++   E  R   R+ KE
Sbjct:    1 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI--QAVLSLYASGRTTG-IVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAE--REIVRDIKE 216
[Close]
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACTA_MOUSE (Actin, aortic smooth muscle OS=Mus musculus GN=Acta2 PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 2.048e-74
Identity = 149/221 (67.42%), Postives = 166/221 (75.11%), Query Frame = 2 
Query:  107 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            M + ED   LVCDNG+G+ KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN P  YV +  +  LSLYASGRTTG +VL+   G  H  P+ +            L GR LT    K+LT  GY ++   E  R   R+ KE
Sbjct:    1 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI--QAVLSLYASGRTTG-IVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAE--REIVRDIKE 216
[Close]
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACTA_HUMAN (Actin, aortic smooth muscle OS=Homo sapiens GN=ACTA2 PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 2.048e-74
Identity = 149/221 (67.42%), Postives = 166/221 (75.11%), Query Frame = 2 
Query:  107 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            M + ED   LVCDNG+G+ KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN P  YV +  +  LSLYASGRTTG +VL+   G  H  P+ +            L GR LT    K+LT  GY ++   E  R   R+ KE
Sbjct:    1 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI--QAVLSLYASGRTTG-IVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAE--REIVRDIKE 216
[Close]
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACTA_BOVIN (Actin, aortic smooth muscle OS=Bos taurus GN=ACTA2 PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 2.048e-74
Identity = 149/221 (67.42%), Postives = 166/221 (75.11%), Query Frame = 2 
Query:  107 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            M + ED   LVCDNG+G+ KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN P  YV +  +  LSLYASGRTTG +VL+   G  H  P+ +            L GR LT    K+LT  GY ++   E  R   R+ KE
Sbjct:    1 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI--QAVLSLYASGRTTG-IVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAE--REIVRDIKE 216
[Close]
BLAST of EY684795 vs. ExPASy Swiss-Prot
Match: ACT5_XENLA (Actin, cytoplasmic type 5 OS=Xenopus laevis PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 2.048e-74
Identity = 154/221 (69.68%), Postives = 168/221 (76.02%), Query Frame = 2 
Query:  107 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPC-YVCLLSRLCLSLYASGRTTGYLVLNLEMGPPHRSPL*KSKPFHLPYPNGTLPGRQLTRPPHKLLTVPGYLYLPPPELKRAKKRNAKE 766
            MAD E+I  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP  YV +  +  LSLYASGRTTG +V++   G  H  P+ +            L GR LT    K+LT  GY +    E  R   R+ KE
Sbjct:    1 MAD-EEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI--QAVLSLYASGRTTG-IVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE--REIVRDIKE 215
The following BLAST results are available for this feature:
BLAST of EY684795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 443
Match NameE-valueIdentityDescription
ACTB_XENBO1.568e-7469.68Actin, cytoplasmic 1 OS=Xenopus borealis GN=actb P... [more]
ACT2_HALRO1.568e-7468.20Actin, muscle 2/4/4A OS=Halocynthia roretzi GN=MA2... [more]
ACT1_DIPDE1.568e-7470.05Actin-1/4 OS=Diphyllobothrium dendriticum GN=ACT1 ... [more]
ACT_CRAGI2.048e-7470.05Actin OS=Crassostrea gigas PE=2 SV=1[more]
ACTA_RAT2.048e-7467.42Actin, aortic smooth muscle OS=Rattus norvegicus G... [more]
ACTA_RABIT2.048e-7467.42Actin, aortic smooth muscle OS=Oryctolagus cunicul... [more]
ACTA_MOUSE2.048e-7467.42Actin, aortic smooth muscle OS=Mus musculus GN=Act... [more]
ACTA_HUMAN2.048e-7467.42Actin, aortic smooth muscle OS=Homo sapiens GN=ACT... [more]
ACTA_BOVIN2.048e-7467.42Actin, aortic smooth muscle OS=Bos taurus GN=ACTA2... [more]
ACT5_XENLA2.048e-7469.68Actin, cytoplasmic type 5 OS=Xenopus laevis PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-003-G05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684795 ID=EY684795; Name=EY684795; organism=Citrus sinensis; type=EST; length=878bp
GGTAGCTTAACGCACAGCGCAAAGTCCGTTAGTGAGAGAGAGAATCAGAA
CAGAAACAAAAGGAAGAAAAAAAAATTATTTTTTTTTAGAAATTCGAAGT
TAGAAAATGGCAGATACTGAGGATATTCAGCCTCTTGTTTGTGACAATGG
GACTGGAATGGTGAAGGCTGGATTTGCTGGAGATGATGCTCCAAGAGCTG
TGTTCCCCAGCATTGTGGGTCGCCCTCGCCACACTGGAGTTATGGTTGGT
ATGGGTCAGAAAGATGCCTATGTTGGTGATGAGGCTCAATCCAAAAGAGG
TATTTTGACTTTGAAATACCCAATCGAGCATGGCATTGTTAGCAACTGGG
ACGATATGGAGAAAATCTGGCATCACACATTTTATAATGAGCTTCGTGTG
GCTCCGGAAGAGCATCCGGTTCTTCTCACTGAGGCTCCCCTTAATCCGAA
GGCCAATCGTGAGAAGATGACACAGATTATGTTTGAGACCTTTAACACCC
CCTGCTATGTATGTTTGCTATCCAGGCTGTGCCTTTCTCTCTATGCTAGC
GGTCGTACAACTGGGTATTTGGTCTTGAATCTGGAAATGGGGCCCCCACA
CAGATCCCCTCTATGAAAAAGTAAGCCCTTCCACCTGCCATACCCCAATG
GAACCTTGCCAGGGCGGCAACTTACCAGACCCCCTCATAAACTACTGACC
GTACCGGGATACCTCTATCTCCCCCCCCCTGAGCTGAAGCGAGCTAAGAA
AAGAAATGCCAAGGAAACGAAGACGAAAAGCGGCGGACCGGGCAGCGACG
CACAAAAAAGGACCCCCTACCCCTACCTCCCCACCCAGAGAACAACACAG
GAACAAGCGCCTGTCCACCAGAGAATAA
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