EY684790

Overview
NameEY684790
Unique NameEY684790
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length514
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684790 vs. ExPASy Swiss-Prot
Match: CP138_MYCBO (Putative cytochrome P450 138 OS=Mycobacterium bovis GN=cyp138 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.568e-11
Identity = 27/78 (34.62%), Postives = 49/78 (62.82%), Query Frame = 2
Query:   23 YFIPKGWKVLVYNRGVHYNPENYPEPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLE 256
            + IP+G+ +++    +H +P+ +P+P +FDP R+      P ++IPFGGG+R C GA  A +E+ + +   L ++ LE
Sbjct:  335 WVIPRGYSIIINIAQIHGDPDVFPQPDRFDPQRYIGSKPSPFAWIPFGGGTRRCVGAAFANMEMDVVLRTVLRHFTLE 412          
BLAST of EY684790 vs. ExPASy Swiss-Prot
Match: C6A19_DROME (Probable cytochrome P450 6a19 OS=Drosophila melanogaster GN=Cyp6a19 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.568e-11
Identity = 33/88 (37.50%), Postives = 52/88 (59.09%), Query Frame = 2
Query:   23 YFIPKGWKVLVYNRGVHYNPENYPEPKQFDPSRWDNHTTRPG---SFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPECP 277
            YFI  G  VLV   G+H++PE YPEP++F P R+D    +     +F+PFG G R C G    ++++ I +   + N++ EL +P+ P
Sbjct:  389 YFIEAGTGVLVSTLGIHHDPEFYPEPEKFIPERFDEEQVKKRPTCAFLPFGAGPRNCIGLRFGRMQVIIGLALLIHNFRFEL-HPKTP 475          
BLAST of EY684790 vs. ExPASy Swiss-Prot
Match: CP17A_CHICK (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus gallus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.885e-11
Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 2
Query:    2 ADVNIQGYFIPKGWKVLVYNRGVHYNPENYPEPKQFDPSRW----DNHTTRPG-SFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPECPAEYLPVP 298
            AD +I  Y IPKG +V++    VH++ + + +P++F+P R+      H   P  S++PFG G R+C G  LAK+E+ +F+ + L  + L     ECP +  P+P
Sbjct:  380 ADTSIGEYSIPKGARVVINLWSVHHDEKEWDKPEEFNPGRFLDEQGQHIHSPSPSYLPFGAGIRVCLGEVLAKMELFLFLAWVLQRFTL-----ECPQDQ-PLP 477          
The following BLAST results are available for this feature:
BLAST of EY684790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
CP138_MYCBO7.568e-1134.62Putative cytochrome P450 138 OS=Mycobacterium bovi... [more]
C6A19_DROME7.568e-1137.50Probable cytochrome P450 6a19 OS=Drosophila melano... [more]
CP17A_CHICK9.885e-1135.58Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-003-F10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684790 ID=EY684790; Name=EY684790; organism=Citrus sinensis; type=EST; length=514bp
AGCAGATGTTAATATACAAGGTTATTTCATACCGAAAGGATGGAAAGTTT
TGGTCTACAACAGAGGTGTTCACTACAATCCTGAAAACTATCCAGAGCCA
AAGCAATTTGATCCTTCAAGATGGGATAATCATACAACTAGACCAGGATC
CTTCATTCCATTTGGAGGTGGATCAAGGATTTGCCCTGGAGCTGATCTGG
CCAAACTTGAAATTTCAATTTTTATTCATTATTTTCTCCTCAACTATAAA
CTTGAACTACAAAATCCTGAATGCCCGGCGGAGTATTTGCCTGTACCAAG
ACCTTCGGACCAATGCCTTGCAAAAGTAGTCGGGTTCAAGTAATCATCAT
CGGCAGTTCCAAGAAAGTCTGCATATGTATATTCCAATGTACGCCTGTTG
TCAAATAAACGCTGCAAATAAAGATAATAACAATAATAATTAATATGTTG
TTGAAACAATATTAAATTGCTCCATTTGTTAATTTTTATTTTTATTTAAA
AAAAAAAAAAAAAA
back to top