EY684787
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_VIBPA (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Vibrio parahaemolyticus GN=rlmB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.313e-15 Identity = 50/171 (29.24%), Postives = 89/171 (52.05%), Query Frame = 2 Query: 2 IKETSKHDLNMVVGNRPHQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENG-WRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 I++ ++ L+ HQG++ + + ++D I A + + L + LD VTDP NLGA +R+A G + +++ SAP++ VSK + G+ E+V L N+ + + + E G W V G+ + + P +V+G+EG G+R L +C L++IP Sbjct: 51 IQQMTRKTLDDKAHGANHQGIIARVKVAKQLNENDIDDILA-QHETPLLLVLDGVTDPHNLGACLRNADAAGVAAIIVPKDRSAPMNATVSKVACGAAEVVPLIRVTNLARTMRTLQEQGIWFV--GTAGEATHDIYQAKLTGPLAIVMGAEGDGMRRLTRETCDDLIKIP 218
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_SHEON (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Shewanella oneidensis GN=rlmB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.313e-15 Identity = 58/171 (33.92%), Postives = 85/171 (49.71%), Query Frame = 2 Query: 2 IKETSKHDLNMVVGNRPHQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENG-WRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 I+ TS+ L+ + HQG+V +++ +LD + A D L + LD VTDP NLGA +R+A G G+++ NS L+ VVSK + G+ E V L N+ + + E G W V G+ L + P + +G+EG GLR L C LV IP Sbjct: 52 IQVTSRKVLDEKAESTQHQGIVARVKAAKILAEHDLDELLAKTDLPFLLI-LDGVTDPHNLGACLRNADAAGVQGIIVPKDNSVGLTAVVSKVACGAAETVPLFQVTNLARTMRHLQEKGVWIV--GTAGEADCELYQADLKGPLAIAMGAEGKGLRRLSRECCDTLVSIP 219
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: TRMHL_STAAW (Putative trmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain MW2) GN=MW0487 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.946e-15 Identity = 47/158 (29.75%), Postives = 81/158 (51.27%), Query Frame = 2 Query: 38 VGNRPHQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 + N PHQG+ +P E + +++ S + LD + DP NLG+I+R+A G GV++ + S L+ V+KAS G++E V + N+ + + +NG+ V G+ ++ A + +V+GSEG G+ LV C ++IP Sbjct: 61 LANAPHQGVAALIAPYEYADFDQFLKQQKEKEGLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVTNLAKTIDELKDNGFWV-AGTEANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDFYIKIP 217
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: TRMHL_STAAS (Putative trmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0489 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.946e-15 Identity = 47/158 (29.75%), Postives = 81/158 (51.27%), Query Frame = 2 Query: 38 VGNRPHQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 + N PHQG+ +P E + +++ S + LD + DP NLG+I+R+A G GV++ + S L+ V+KAS G++E V + N+ + + +NG+ V G+ ++ A + +V+GSEG G+ LV C ++IP Sbjct: 61 LANAPHQGVAALIAPYEYADFDQFLKQQKEKEGLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVTNLAKTIDELKDNGFWV-AGTEANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDFYIKIP 217
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: TRMHL_STAAR (Putative trmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0535 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.946e-15 Identity = 47/158 (29.75%), Postives = 81/158 (51.27%), Query Frame = 2 Query: 38 VGNRPHQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 + N PHQG+ +P E + +++ S + LD + DP NLG+I+R+A G GV++ + S L+ V+KAS G++E V + N+ + + +NG+ V G+ ++ A + +V+GSEG G+ LV C ++IP Sbjct: 61 LANAPHQGVAALIAPYEYADFDQFLKQQKEKEGLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVTNLAKTIDELKDNGFWV-AGTEANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDFYIKIP 217
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: TRMHL_STAAN (Putative trmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain N315) GN=SA0490 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.946e-15 Identity = 47/158 (29.75%), Postives = 81/158 (51.27%), Query Frame = 2 Query: 38 VGNRPHQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 + N PHQG+ +P E + +++ S + LD + DP NLG+I+R+A G GV++ + S L+ V+KAS G++E V + N+ + + +NG+ V G+ ++ A + +V+GSEG G+ LV C ++IP Sbjct: 61 LANAPHQGVAALIAPYEYADFDQFLKQQKEKEGLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVTNLAKTIDELKDNGFWV-AGTEANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDFYIKIP 217
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: TRMHL_STAAM (Putative trmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0531 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.946e-15 Identity = 47/158 (29.75%), Postives = 81/158 (51.27%), Query Frame = 2 Query: 38 VGNRPHQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 + N PHQG+ +P E + +++ S + LD + DP NLG+I+R+A G GV++ + S L+ V+KAS G++E V + N+ + + +NG+ V G+ ++ A + +V+GSEG G+ LV C ++IP Sbjct: 61 LANAPHQGVAALIAPYEYADFDQFLKQQKEKEGLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVTNLAKTIDELKDNGFWV-AGTEANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDFYIKIP 217
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_PSEPK (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Pseudomonas putida (strain KT2440) GN=rlmB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.946e-15 Identity = 49/153 (32.03%), Postives = 83/153 (54.25%), Query Frame = 2 Query: 53 HQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 HQG+V + SP ++ L+ + + L + LD VTDP NLGA +R+A GA+ V++ SA L+ VV K + G+ E++ L N+ + L + G V+G + ++ + G P ++++G+EG G+R L C LV++P Sbjct: 68 HQGVVAEVSPSQVWGELMLEELLERTETPPLILVLDGVTDPHNLGACLRTADAAGATAVIVPKDKSATLTPVVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEAEQEIYQQDLTG-PLVMIMGAEGKGMRRLTREHCDFLVKLP 219
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_VIBVY (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Vibrio vulnificus (strain YJ016) GN=rlmB PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.148e-14 Identity = 50/154 (32.47%), Postives = 80/154 (51.95%), Query Frame = 2 Query: 53 HQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENG-WRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 HQG++ P + + +LD I A + + L + LD VTDP NLGA +R+A G + V++ SAP++ VSK + G+ E V L N+ + + E G W V G+ + + +V+G+EG G+R L +C L++IP Sbjct: 68 HQGIIARVKPAKQLNENDLDDILA-KHASPLLLILDGVTDPHNLGACLRNADAAGVAAVIVPKDKSAPMTATVSKVACGAAETVPLVRVTNLARTMRHLQEQGIWIV--GTAGEATHDIYQAKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIP 218
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_VIBVU (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Vibrio vulnificus GN=rlmB PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.148e-14 Identity = 50/154 (32.47%), Postives = 80/154 (51.95%), Query Frame = 2 Query: 53 HQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENG-WRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 HQG++ P + + +LD I A + + L + LD VTDP NLGA +R+A G + V++ SAP++ VSK + G+ E V L N+ + + E G W V G+ + + +V+G+EG G+R L +C L++IP Sbjct: 68 HQGIIARVKPAKQLNENDLDDILA-KHASPLLLILDGVTDPHNLGACLRNADAAGVAAVIVPKDKSAPMTATVSKVACGAAETVPLVRVTNLARTMRHLQEQGIWIV--GTAGEATHDIYQAKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIP 218 The following BLAST results are available for this feature:
BLAST of EY684787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY684787 ID=EY684787; Name=EY684787; organism=Citrus sinensis; type=EST; length=917bpback to top |