EY684787
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_YERPE (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Yersinia pestis GN=rlmB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.127e-12 Identity = 54/171 (31.58%), Postives = 79/171 (46.20%), Query Frame = 2 Query: 2 IKETSKHDLNMVVGNRPHQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFL-VSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 I+ S+ L+ V HQG+V + +L P + + + LD VTDP NLGA +RSA G V++ SA L+ + K ++G+ E V L N+ + L V N W V G+ L + P LV+G+EG G+R L C L+ IP Sbjct: 50 IQVASRQWLDSQVEGGVHQGIVARVREGRQYQENDL-PALLESVETPFLLVLDGVTDPHNLGACLRSADAAGVHAVIVPRDRSAQLNAIAKKVASGAAENVPLIKVTNLARTLRVLQEHNVWIV--GTAGEADHTLYQSKMTGPMALVMGAEGEGMRRLTREHCDELISIP 217
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_SHIFL (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Shigella flexneri GN=rlmB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.127e-12 Identity = 51/154 (33.12%), Postives = 73/154 (47.40%), Query Frame = 2 Query: 53 HQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFL-VSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 HQG++ P + +L + A DQ L + LD VTDP NLGA +RSA G V++ SA L+ K + G+ E V L N+ + + + EN W V G+ L + LV+G+EG G+R L C L+ IP Sbjct: 67 HQGIIARVKPGRQYQENDLPDLIASLDQPFLLI-LDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIV--GTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIP 217
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_ECOLI (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Escherichia coli (strain K12) GN=rlmB PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.127e-12 Identity = 51/154 (33.12%), Postives = 73/154 (47.40%), Query Frame = 2 Query: 53 HQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFL-VSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 HQG++ P + +L + A DQ L + LD VTDP NLGA +RSA G V++ SA L+ K + G+ E V L N+ + + + EN W V G+ L + LV+G+EG G+R L C L+ IP Sbjct: 67 HQGIIARVKPGRQYQENDLPDLIASLDQPFLLI-LDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIV--GTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIP 217
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_ECOL6 (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Escherichia coli O6 GN=rlmB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.127e-12 Identity = 51/154 (33.12%), Postives = 73/154 (47.40%), Query Frame = 2 Query: 53 HQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFL-VSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 HQG++ P + +L + A DQ L + LD VTDP NLGA +RSA G V++ SA L+ K + G+ E V L N+ + + + EN W V G+ L + LV+G+EG G+R L C L+ IP Sbjct: 67 HQGIIARVKPGRQYQENDLPDLIASLDQPFLLI-LDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIV--GTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIP 217
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_ECO57 (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Escherichia coli O157:H7 GN=rlmB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.127e-12 Identity = 51/154 (33.12%), Postives = 73/154 (47.40%), Query Frame = 2 Query: 53 HQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFL-VSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 HQG++ P + +L + A DQ L + LD VTDP NLGA +RSA G V++ SA L+ K + G+ E V L N+ + + + EN W V G+ L + LV+G+EG G+R L C L+ IP Sbjct: 67 HQGIIARVKPGRQYQENDLPDLIASLDQPFLLI-LDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIV--GTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIP 217
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_XANCP (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Xanthomonas campestris pv. campestris GN=rlmB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12 Identity = 55/178 (30.90%), Postives = 82/178 (46.07%), Query Frame = 2 Query: 2 IKETSKHDLNMVVGNRPHQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENG-WRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIPGNIPDDV 532 ++ + L+ V G HQG+ + + EL+ + +L + LD V DP NLGA +RSA G + VV+ SA ++ V K SAG+ + + + N+ + L + G W L G L + LVLG EG GLR L C LV+IP +P D+ Sbjct: 53 VRRVNTQALDGVGGQVRHQGVAARYAAARLWAENELEGLVEAAQGRALVLILDGVQDPHNLGACLRSAAAAGVTAVVIPKDKSATVNATVRKTSAGAADRIPVVAVTNLARCLRDLQKQGVW--LYGLAGEAEASLYSVDLRGNVGLVLGGEGDGLRRLTREHCDGLVKIP--MPGDI 226
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_SALTY (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Salmonella typhimurium GN=rlmB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12 Identity = 48/153 (31.37%), Postives = 73/153 (47.71%), Query Frame = 2 Query: 53 HQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 HQG++ P + +L + A D+ L + LD VTDP NLGA +RSA G V++ SA L+ K + G+ E V L N+ + + E ++G + + PG+ LV+G+EG G+R L C L+ IP Sbjct: 67 HQGIIARVKPGRQYQENDLPDLIALHDRPFLLI-LDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMPGR-MALVMGAEGEGMRRLTREHCDELISIP 217
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_SALTI (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Salmonella typhi GN=rlmB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12 Identity = 48/153 (31.37%), Postives = 73/153 (47.71%), Query Frame = 2 Query: 53 HQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 HQG++ P + +L + A D+ L + LD VTDP NLGA +RSA G V++ SA L+ K + G+ E V L N+ + + E ++G + + PG+ LV+G+EG G+R L C L+ IP Sbjct: 67 HQGIIARVKPGRQYQENDLPDLIALHDRPFLLI-LDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMPGR-MALVMGAEGEGMRRLTREHCDELISIP 217
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_PHOLL (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Photorhabdus luminescens subsp. laumondii GN=rlmB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.333e-12 Identity = 52/154 (33.77%), Postives = 72/154 (46.75%), Query Frame = 2 Query: 53 HQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAE-NGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 HQG++ P + +L + A + L V LD VTDP NLGA +RSA G V++ SA L+ K + G+ E V L N+ + L E N W V G+ L + P LV+G+EG G+R L C L+ IP Sbjct: 67 HQGIIAKVKPGRQYQENDLPDLLAQVETPFLLV-LDGVTDPHNLGACLRSADAAGVHAVIIPRDRSAQLNATAKKVACGAAESVPLIRVTNLARTLRLLQEYNIWVV--GTAGEADHTLYQSKLTGPMALVMGAEGEGMRRLTREHCDELISIP 217
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: Y516_BORBU (Uncharacterized tRNA/rRNA methyltransferase BB_0516 OS=Borrelia burgdorferi GN=BB_0516 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.965e-12 Identity = 54/196 (27.55%), Postives = 97/196 (49.49%), Query Frame = 2 Query: 20 HDLNMVVGNRPHQGLVLDASPLEMVKIKELDPISAD---------EDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTI-LVLGSEGTGLRPLVERSCTHLVRIPGNIPDDVTAGKIDDVEANGNHG 577 ++L+ ++ N+ H+G L L++ K K + + D + + + + LDE+ DPQN GAI+R+A F V+ K SA + V + S+G+ + V+ N+ + G+ + G + K +N+I I L+LG+EG G+ L++ + L+RIP T+GKID + + + G Sbjct: 32 NELDKILKNKDHRGFALK---LKLEKNKNVKTQTKDFENLLETFKKKENAFILLLDEIEDPQNFGAILRTAEQFSIDLVITTQKRSAKDNSTVLRTSSGASQYVKKMTVTNINNTINLLKNYGFWIYTGDI--KGQDINKIKINDKKIALILGNEGKGVHKLIKENSDFLIRIP-------TSGKIDSLNVSVSTG 215 The following BLAST results are available for this feature:
BLAST of EY684787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684787 ID=EY684787; Name=EY684787; organism=Citrus sinensis; type=EST; length=917bpback to top |