EY684787
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_RALSO (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Ralstonia solanacearum GN=rlmB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.965e-12 Identity = 52/162 (32.10%), Postives = 75/162 (46.30%), Query Frame = 2 Query: 26 LNMVVGNRPHQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 L + G HQG+V A L + LD + + L + LD VTDP NLGA +R A GA V+ S ++ V+K ++G+ E V N+ + L + G V+ G+ L P LV+G+EG G+R L +C LV IP Sbjct: 60 LRGIAGTDRHQGVVAKAEALSLAL--NLDELLDGIEGPPLLLVLDGVTDPHNLGACLRVADAAGAHAVIAPKDRSVGINTTVAKVASGAAETVPYITVTNLARTLRELQQRGVWVI-GTADEAEQDLYRADFKGPIALVMGAEGEGMRRLTRETCDTLVSIP 218
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_BLOFL (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Blochmannia floridanus GN=rlmB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12 Identity = 50/171 (29.24%), Postives = 82/171 (47.95%), Query Frame = 2 Query: 2 IKETSKHDLNMVVGNRPHQGLVLDASPLEMVKIKEL-DPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 I+E ++ LN+ HQG++ + P+ + L + + L + LD +TDP NLGA IRSA G +++ SA ++ V K ++GS + V N+ + L + ++G + S + N P LV+GSE +G+R L +C LV IP Sbjct: 50 IQECTRRVLNIKSMKSAHQGIIAEVIPMPALNEDYLLHFLKTKNNIIPLLLVLDGITDPHNLGACIRSADAAGVHMIIVPRDRSANVNATVRKVASGSSDRVPFVRVTNLSRTLKLLKKYNIYIVGSVLRSNQILFN-TRLIDPIALVMGSESSGIRRLTRENCDKLVHIP 219
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_NEIMB (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Neisseria meningitidis serogroup B GN=rlmB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11 Identity = 52/164 (31.71%), Postives = 78/164 (47.56%), Query Frame = 2 Query: 26 LNMVVGNRPHQGLV--LDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 LN + HQG+V +DAS + L+ + + + L + LD +TDP NLGA +R+A G V+ SA L+ VSK + G+ E V N+ + L E G ++G +S ++ L V+G+EG G+R L C LV IP Sbjct: 60 LNAISKGARHQGVVGFIDASKNHV----HLEDVLENLSEPPLLLILDGITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVACGAAETVPYITVTNLARTLRELKEYGIWIIGTDMSGES-DLYHCNLPDSAAWVMGNEGDGMRRLTREHCDMLVSIP 218
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_NEIMA (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Neisseria meningitidis serogroup A GN=rlmB PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11 Identity = 52/164 (31.71%), Postives = 77/164 (46.95%), Query Frame = 2 Query: 26 LNMVVGNRPHQGLV--LDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 LN + HQG+V +DAS + L+ + + + L + LD +TDP NLGA +R+A G V+ SA L+ VSK ++G+ E V N+ + L E G ++G + A L V+G+EG G+R L C LV IP Sbjct: 60 LNAISKGARHQGVVGFIDASKNHV----HLEDVLENLSEPPLLLILDGITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVASGAAETVPYITVTNLARTLRELKEYGIWIIGTDMGGNA-DLYHCDLPDSAAWVMGNEGDGMRRLTREHCDMLVSIP 218
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_ERWCT (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Erwinia carotovora subsp. atroseptica GN=rlmB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11 Identity = 54/172 (31.40%), Postives = 81/172 (47.09%), Query Frame = 2 Query: 2 IKETSKHDLNMVVGNRPHQGLVLDASPLEMVKIKELD-PISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFL-VSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 I+ S+ L+ + HQG+V A E K +E D P D + + LD VTDP NLGA +R+A G V++ SA L+ V K + G+ E + + N+ + + + N W V G+ L + P LV+G+EG G+R L C L+ IP Sbjct: 50 IQVASRQWLDKQAEDAVHQGIV--AKVKEGRKYQENDLPAMLDNLEMPFLLILDGVTDPHNLGACLRNADGAGVHAVIVPRDRSAQLNATVKKVACGAAETIPVISVTNLARTMRLLQERNIWIV--GTAGEADHTLYQSKLTGPLALVMGAEGEGMRRLTREHCDELISIP 217
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_NITEU (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Nitrosomonas europaea GN=rlmB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.897e-11 Identity = 47/159 (29.56%), Postives = 76/159 (47.80%), Query Frame = 2 Query: 35 VVGNRPHQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENGWRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 + G HQG+ + L + L+ + + +L + LD V DP NLGA +R A FG VV+ + LS V K ++G+++ V N+ + L E G ++G + + L+ + +P VLG+E G+R L +C LV IP Sbjct: 63 MTGTTRHQGVAAHVTKLR--RYATLEDLLEGLTEPALLLVLDGVKDPHNLGACLRVADAFGVHAVVVPKDRAVGLSATVHKVASGAVDTVPFFAVTNLARTLRELKEMGLWIVGTAADAPDT-LDSVTLTRPLAWVLGAEDGGMRRLTREACDLLVSIP 218
BLAST of EY684787 vs. ExPASy Swiss-Prot
Match: RLMB_XANAC (23S rRNA (guanosine-2'-O-)-methyltransferase rlmB OS=Xanthomonas axonopodis pv. citri GN=rlmB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.701e-11 Identity = 52/171 (30.41%), Postives = 77/171 (45.03%), Query Frame = 2 Query: 2 IKETSKHDLNMVVGNRPHQGLVLDASPLEMVKIKELDPISADEDQASLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELVELRYCNNMMQFLVSSAENG-WRVLGGSVSSKAVPLNEIPPGQPTILVLGSEGTGLRPLVERSCTHLVRIP 511 ++ + L+ V G HQG+ + + EL+ + +L + LD V DP NLGA +RSA G + VV+ SA ++ V K SAG+ + + + N+ + L + G W L G L + LVLG E GLR L C LV+IP Sbjct: 53 VRRVNTQALDGVGGQVRHQGVAARYAAARLWAENELEGLVEAAAGRALVLILDGVQDPHNLGACLRSAAAAGVTAVVIPKDKSATVNATVRKTSAGAADRIPVVAVTNLARCLRDLQKQGVW--LYGLAGEAEASLYSVDLRGNVGLVLGGEADGLRRLTREHCDGLVKIP 221 The following BLAST results are available for this feature:
BLAST of EY684787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684787 ID=EY684787; Name=EY684787; organism=Citrus sinensis; type=EST; length=917bpback to top |