EY684783
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684783 vs. ExPASy Swiss-Prot
Match: U2AF2_DROME (Splicing factor U2AF 50 kDa subunit OS=Drosophila melanogaster GN=U2af50 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.871e-25 Identity = 66/159 (41.51%), Postives = 94/159 (59.12%), Query Frame = 1 Query: 13 EQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPG-QPSPNLNLAAVGLASGAIGGA--EGPDRVFVGGLPYYFTETHIKELVEAFGTLHGFDLVKDRDTGNSKGYGFCVY 480 E+ + FF+Q M +G A G V+ IN +K FAF+E R+++E + AMA DGI +G ++++RRP DY P PG +P + A V +SG I + P ++F+GGLP Y + +KEL+ +FG L F+LVKD TG SKGY FC Y Sbjct: 106 EEEMMEFFNQQMHLVGLAQAA-GSPVLACQINLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPM------PGITDTPAIKPAVV--SSGVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEY 255
BLAST of EY684783 vs. ExPASy Swiss-Prot
Match: U2AF2_CAEEL (Splicing factor U2AF 65 kDa subunit OS=Caenorhabditis elegans GN=uaf-1 PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 7.110e-22 Identity = 63/160 (39.38%), Postives = 95/160 (59.38%), Query Frame = 1 Query: 10 NEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETHIKELVEAFGTLHGFDLVKDRDTGNSKGYGFCVYPNP 489 NE+A+ FF+Q M G A PG+ ++ IN +K FAF+E R+++E + MA DGI F G ++VRRP DY P+ Q + ++N + + +++ + A +++F+GGLP Y TE +KEL+ +FG L F L D GNSKGY F Y +P Sbjct: 196 NEEAMLDFFNQQMHLCGLAQA-PGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDYQPS--------QNTFDMN-SRMPVSTIVVDSA---NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDP 341
BLAST of EY684783 vs. ExPASy Swiss-Prot
Match: U2AF2_CAEBR (Splicing factor U2AF 65 kDa subunit OS=Caenorhabditis briggsae GN=uaf-1 PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 7.110e-22 Identity = 64/160 (40.00%), Postives = 94/160 (58.75%), Query Frame = 1 Query: 10 NEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETHIKELVEAFGTLHGFDLVKDRDTGNSKGYGFCVYPNP 489 NE+A+ FF+Q M A PG+ ++ IN +K FAF+E R+++E + MA DGI F G ++VRRP DY P+ Q + ++N A + ++S + A +++F+GGLP Y TE +KEL+ +FG L F L D GNSKGY F Y +P Sbjct: 187 NEEAMLDFFNQQMHLCNLAQA-PGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDYQPS--------QNTFDMN-ARMPVSSIVVDSA---NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDP 332 The following BLAST results are available for this feature:
BLAST of EY684783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY684783 ID=EY684783; Name=EY684783; organism=Citrus sinensis; type=EST; length=891bpback to top |