EY684688

Overview
NameEY684688
Unique NameEY684688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARF5_HUMAN (ADP-ribosylation factor 5 OS=Homo sapiens GN=ARF5 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 9.790e-19
Identity = 46/141 (32.62%), Postives = 79/141 (56.03%), Query Frame = 2
Query:  143 LFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            +F K++M + ++GL  AGKT+++  +  G      IPT+GFN+      N+   +WD+GGQ + R +W  Y +    +++VVD+ D + +  S  EL  +L +  L    LLV  NK D P A+   +L +++GL+ +  R
Sbjct:   12 IFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSR 151          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARF4_BOVIN (ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE=2 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 9.790e-19
Identity = 45/141 (31.91%), Postives = 81/141 (57.45%), Query Frame = 2
Query:  143 LFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            LF K++M + ++GL  AGKT+++  +  G      IPT+GFN+      N+   +WD+GGQ + R +W  Y +    +++VVD+ D + +     EL  +L +  L    LL+  NK D P A++  ++ +++GL+S+ +R
Sbjct:   12 LFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAEELQKMLQEDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNR 151          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARL4D_PONAB (ADP-ribosylation factor-like protein 4D OS=Pongo abelii GN=ARL4D PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.279e-18
Identity = 48/139 (34.53%), Postives = 82/139 (58.99%), Query Frame = 2
Query:  155 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKET-----KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSI 556
            Q + + +IGL +AGKTSL+  +    + +  +PT GFN  K          +T ++WD+GGQ + R +W  Y R    +V+VVDAA+ + L  ++ ELH +   +   G+P+LVL NK D+P ALS  ++ +++ ++ +
Sbjct:   20 QALHVVVIGLDSAGKTSLLYRLKFKEFVQS-VPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRISRASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVREL 157          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARL4D_HUMAN (ADP-ribosylation factor-like protein 4D OS=Homo sapiens GN=ARL4D PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.279e-18
Identity = 48/139 (34.53%), Postives = 82/139 (58.99%), Query Frame = 2
Query:  155 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKET-----KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSI 556
            Q + + +IGL +AGKTSL+  +    + +  +PT GFN  K          +T ++WD+GGQ + R +W  Y R    +V+VVDAA+ + L  ++ ELH +   +   G+P+LVL NK D+P ALS  ++ +++ ++ +
Sbjct:   20 QALHVVVIGLDSAGKTSLLYRLKFKEFVQS-VPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRISRASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVREL 157          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARL3_HUMAN (ADP-ribosylation factor-like protein 3 OS=Homo sapiens GN=ARL3 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.279e-18
Identity = 47/137 (34.31%), Postives = 77/137 (56.20%), Query Frame = 2
Query:  155 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            QE+ + L+GL NAGKT+L+  +A+   S  + PT GFN++        + +WD+GGQ + R  W+ Y      ++YV+D+AD      +  EL +LL +  L+ +P+L+  NK D   A    ++ E + L +I DR
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISH-ITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDR 151          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARF11_CAEEL (ADP-ribosylation factor 1-like 1 OS=Caenorhabditis elegans GN=arf-1.1 PE=3 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.279e-18
Identity = 53/156 (33.97%), Postives = 89/156 (57.05%), Query Frame = 2
Query:  104 MGLWEAFLNWLQSLFFKQ-EMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDRK 568
            MGL   F + + S  F   E    ++GL  AGKT+++  +     + + IPT+GFN+   T   +T+ +WD+GGQ + R++W+ Y    + +V+VVD++D + +P ++ EL  LL +  L    LLV  NK D P A S  +L + + L S+ +R+
Sbjct:    1 MGL---FFSKISSFMFPNIECRTLMLGLDGAGKTTILYKLKLNE-TVNTIPTIGFNVETVTFQKITLTVWDVGGQKKIRALWKYYFPNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARSPAELTQLLDLGSLKNRE 152          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: SAR1B_BRACM (GTP-binding protein SAR1B OS=Brassica campestris GN=SAR1B PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.670e-18
Identity = 56/156 (35.90%), Postives = 89/156 (57.05%), Query Frame = 2
Query:  104 MGLWEAFLNWLQSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDRK 568
            M L++ F   L SL  +++E ++  +GL NAGKT+L++++      +   PT      + + G +  K +DLGG    R +W+ Y   V A+VY+VDA D +    S+ EL  LL+  +L  +P L+LGNKID P A S+++L   +GL + T  K
Sbjct:    1 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQ-PTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALATVPFLILGNKIDNPYAASEDELRYHLGLTNFTTGK 155          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARL3_PIG (ADP-ribosylation factor-like protein 3 OS=Sus scrofa GN=ARL3 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.670e-18
Identity = 47/137 (34.31%), Postives = 76/137 (55.47%), Query Frame = 2
Query:  155 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            QE+ + L+GL NAGKT+L+  +A+   S  + PT GFN++        + +WD+GGQ + R  W  Y      ++YV+D+AD      +  EL +LL +  L+ +P+L+  NK D   A    ++ E + L +I DR
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISH-ITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDR 151          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARL3_BOVIN (ADP-ribosylation factor-like protein 3 OS=Bos taurus GN=ARL3 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.670e-18
Identity = 47/137 (34.31%), Postives = 76/137 (55.47%), Query Frame = 2
Query:  155 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            QE+ + L+GL NAGKT+L+  +A+   S  + PT GFN++        + +WD+GGQ + R  W  Y      ++YV+D+AD      +  EL +LL +  L+ +P+L+  NK D   A    ++ E + L +I DR
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISH-ITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDR 151          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: SAR1_SCHPO (Small COPII coat GTPase sar1 OS=Schizosaccharomyces pombe GN=sar1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.181e-18
Identity = 51/136 (37.50%), Postives = 79/136 (58.09%), Query Frame = 2
Query:  164 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDRKV 571
            ++  +GL NAGKT+L++++     +  M PT+     +   GNV    +DLGG  + R +W  Y   V+ IVY+VD  D++ L  S++EL  LL    L  +P L+LGNKID P A+S+++L   +GL   T + V
Sbjct:   22 KMLFLGLDNAGKTTLLHMLKNDRLAV-MQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKIDAPGAISEDELKAALGLYQTTGKGV 156          
The following BLAST results are available for this feature:
BLAST of EY684688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
ARF5_HUMAN9.790e-1932.62ADP-ribosylation factor 5 OS=Homo sapiens GN=ARF5 ... [more]
ARF4_BOVIN9.790e-1931.91ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE... [more]
ARL4D_PONAB1.279e-1834.53ADP-ribosylation factor-like protein 4D OS=Pongo a... [more]
ARL4D_HUMAN1.279e-1834.53ADP-ribosylation factor-like protein 4D OS=Homo sa... [more]
ARL3_HUMAN1.279e-1834.31ADP-ribosylation factor-like protein 3 OS=Homo sap... [more]
ARF11_CAEEL1.279e-1833.97ADP-ribosylation factor 1-like 1 OS=Caenorhabditis... [more]
SAR1B_BRACM1.670e-1835.90GTP-binding protein SAR1B OS=Brassica campestris G... [more]
ARL3_PIG1.670e-1834.31ADP-ribosylation factor-like protein 3 OS=Sus scro... [more]
ARL3_BOVIN1.670e-1834.31ADP-ribosylation factor-like protein 3 OS=Bos taur... [more]
SAR1_SCHPO2.181e-1837.50Small COPII coat GTPase sar1 OS=Schizosaccharomyce... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-002-C09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684688 ID=EY684688; Name=EY684688; organism=Citrus sinensis; type=EST; length=763bp
AATTGTAGGAGAAAAGAGAAGAAGCAAGAAAAGTTTTTTCGCTTTTTCCC
AGCTTTTATACTTCAAAGGCGAAACCCTAGCTTCTTATTTTGTCGAATAA
AAGATGGGATTATGGGAAGCTTTTCTCAACTGGCTTCAAAGTCTCTTCTT
TAAACAAGAAATGGAGCTATCTTTGATAGGGCTTCAGAATGCAGGCAAGA
CATCCCTTGTGAATGTTATCGCAACTGGTGGATATAGTGAAGATATGATC
CCAACAGTAGGATTTAATATGAGGAAAGAGACTAAGGGGAATGTCACAAT
AAAGCTGTGGGATCTTGGAGGCCAACCACGGTTTCGCAGTATGTGGGAGA
GATACTGTCGTGCAGTTTCAGCTATTGTTTACGTTGTTGATGCTGCTGAT
TATGATAACTTGCCTGCGTCAAGAAGTGAACTCCATGACTTGTTAAATAA
AGCCTCGCTGAATGGTATCCCATTGCTGGTACTGGGAAACAAGATTGATA
AACCATAAGCCTTGTCTAAAGAGGATCTGATGGAACAAATGGGGCTGAAG
TCCATTACCGATAGAAAAGTTGTTGCTACATGATTTCATGCAAGAACTCT
ACCAACATTGAAAAGGCTATTGATTGGCCTGTAAAGCATTCAAAAACCAA
AGAGTGAAGTTTCTACCCTCTAGTATAGACACCAATGGGAAGCCTGTTAT
ACAGAACTTGGAATTATGGAAAAATTACAAGGAAGATGAATTGGTAAAGG
CACCGTCGCACCA
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