EY684688

Overview
NameEY684688
Unique NameEY684688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARLX_DICDI (ADP-ribosylation factor-like protein DDB_G0292332 OS=Dictyostelium discoideum GN=DDB_G0292332 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.513e-11
Identity = 42/138 (30.43%), Postives = 77/138 (55.80%), Query Frame = 2 
Query:  125 LNWLQSLF-FKQEMELSLIGLQNAGKTSLVNVIATGGYSEDM-----------IPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRA-VSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKID 499
            ++++++LF F    ++ ++G++N GKT+L+  I    YSE++           IPT GFN+       V   +WD+GG+   R  +  Y  + + +I++V D++D ++L  S+ E   L N+ SL  +P L++ NK D
Sbjct:    5 ISFIKNLFGFLTIKKVMILGVENVGKTTLLYNIYKF-YSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQD 141
The following BLAST results are available for this feature:
BLAST of EY684688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
ARLX_DICDI7.513e-1130.43ADP-ribosylation factor-like protein DDB_G0292332 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-002-C09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684688 ID=EY684688; Name=EY684688; organism=Citrus sinensis; type=EST; length=763bp
AATTGTAGGAGAAAAGAGAAGAAGCAAGAAAAGTTTTTTCGCTTTTTCCC
AGCTTTTATACTTCAAAGGCGAAACCCTAGCTTCTTATTTTGTCGAATAA
AAGATGGGATTATGGGAAGCTTTTCTCAACTGGCTTCAAAGTCTCTTCTT
TAAACAAGAAATGGAGCTATCTTTGATAGGGCTTCAGAATGCAGGCAAGA
CATCCCTTGTGAATGTTATCGCAACTGGTGGATATAGTGAAGATATGATC
CCAACAGTAGGATTTAATATGAGGAAAGAGACTAAGGGGAATGTCACAAT
AAAGCTGTGGGATCTTGGAGGCCAACCACGGTTTCGCAGTATGTGGGAGA
GATACTGTCGTGCAGTTTCAGCTATTGTTTACGTTGTTGATGCTGCTGAT
TATGATAACTTGCCTGCGTCAAGAAGTGAACTCCATGACTTGTTAAATAA
AGCCTCGCTGAATGGTATCCCATTGCTGGTACTGGGAAACAAGATTGATA
AACCATAAGCCTTGTCTAAAGAGGATCTGATGGAACAAATGGGGCTGAAG
TCCATTACCGATAGAAAAGTTGTTGCTACATGATTTCATGCAAGAACTCT
ACCAACATTGAAAAGGCTATTGATTGGCCTGTAAAGCATTCAAAAACCAA
AGAGTGAAGTTTCTACCCTCTAGTATAGACACCAATGGGAAGCCTGTTAT
ACAGAACTTGGAATTATGGAAAAATTACAAGGAAGATGAATTGGTAAAGG
CACCGTCGCACCA
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