EY684688

Overview
NameEY684688
Unique NameEY684688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARF_NEUCR (ADP-ribosylation factor OS=Neurospora crassa GN=NCU08340 PE=3 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 4.695e-21
Identity = 51/141 (36.17%), Postives = 82/141 (58.16%), Query Frame = 2
Query:  143 LFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            LF K+EM + ++GL  AGKT+++  +  G      IPT+GFN+      N+   +WD+GGQ + R +W  Y +    I++VVD+ D D +  +R EL  +LN+  L    LLV  NK D P A++  ++ +++GL S+  R
Sbjct:   15 LFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTT-IPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLSSLRQR 154          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: SAR1B_MOUSE (GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.132e-21
Identity = 55/154 (35.71%), Postives = 92/154 (59.74%), Query Frame = 2
Query:  110 LWEAFLNWLQSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDRK 568
            ++  F + LQ L  +K+  +L  +GL NAGKT+L++++      +  +PT+     + T   +T   +DLGG  + R +W+ Y  A++ IV++VD AD++ L  S+ EL  L+   ++  +P+L+LGNKID+P A+S+E L E  GL   T  K
Sbjct:    8 IYSGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGK 160          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARL1_BOVIN (ADP-ribosylation factor-like protein 1 OS=Bos taurus GN=ARL1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.132e-21
Identity = 54/149 (36.24%), Postives = 83/149 (55.70%), Query Frame = 2
Query:  122 FLNWLQSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDRK 568
            F +   SLF  +EM + ++GL  AGKT+++  +  G      IPT+GFN+   T  N+  ++WDLGGQ   R  W  Y     A++YVVD+ D D +  S+SEL  +L +  L    L+V  NK D   A++  ++   +GL ++ DRK
Sbjct:    5 FSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANSLGLPALKDRK 152          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARL11_MOUSE (ADP-ribosylation factor-like protein 11 OS=Mus musculus GN=Arl11 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.132e-21
Identity = 50/134 (37.31%), Postives = 85/134 (63.43%), Query Frame = 2
Query:  152 KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRK-ETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLK 550
            K E ++ ++GL +AGKT+++  +  G    D +PTVGFN+   E  G+V++ LWD+GGQ + R+ W+ Y   +  +VYV+D+ D   LP + +EL ++L   ++ G+P LVL NK + P AL   ++  ++GL+
Sbjct:   10 KAEAQVVMMGLDSAGKTTILYKLK-GNQLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELKEVLEDPNMAGVPFLVLANKQEAPGALPLLEIRNRLGLE 142          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: SAR1B_HUMAN (GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.009e-21
Identity = 55/154 (35.71%), Postives = 92/154 (59.74%), Query Frame = 2
Query:  110 LWEAFLNWLQSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDRK 568
            ++  F + LQ L  +K+  +L  +GL NAGKT+L++++      +  +PT+     + T   +T   +DLGG  + R +W+ Y  A++ IV++VD AD++ L  S+ EL  L+   ++  +P+L+LGNKID+P A+S+E L E  GL   T  K
Sbjct:    8 IYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGK 160          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARL1_RAT (ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus GN=Arl1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.009e-21
Identity = 54/149 (36.24%), Postives = 83/149 (55.70%), Query Frame = 2
Query:  122 FLNWLQSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDRK 568
            F +   SLF  +EM + ++GL  AGKT+++  +  G      IPT+GFN+   T  N+  ++WDLGGQ   R  W  Y     A++YVVD+ D D +  S+SEL  +L +  L    L+V  NK D   A++  ++   +GL ++ DRK
Sbjct:    5 FSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRK 152          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARL1_MOUSE (ADP-ribosylation factor-like protein 1 OS=Mus musculus GN=Arl1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.009e-21
Identity = 54/149 (36.24%), Postives = 83/149 (55.70%), Query Frame = 2
Query:  122 FLNWLQSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDRK 568
            F +   SLF  +EM + ++GL  AGKT+++  +  G      IPT+GFN+   T  N+  ++WDLGGQ   R  W  Y     A++YVVD+ D D +  S+SEL  +L +  L    L+V  NK D   A++  ++   +GL ++ DRK
Sbjct:    5 FSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRK 152          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARL1_CAEEL (ADP-ribosylation factor-like protein 1 OS=Caenorhabditis elegans GN=arl-1 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 8.009e-21
Identity = 53/149 (35.57%), Postives = 86/149 (57.72%), Query Frame = 2
Query:  125 LNWLQSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDRKV 571
            +++ + LF  +EM + ++GL  AGKT+++  +  G      IPT+GFN+ +    N+  ++WDLGGQ   R  W  Y     AI+YVVD+AD D +  SR EL  +L +  L G  L VL NK D    L++ ++ + +GL ++ +R +
Sbjct:    5 MSYFRGLFGAREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFNVEQVEYKNLKFQVWDLGGQTSIRPYWRCYYANTDAIIYVVDSADRDRVGISRQELATMLQEDELQGAVLAVLANKQDIAGCLTETEVYKALGLDALRNRTI 152          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARF_DUGJA (ADP-ribosylation factor OS=Dugesia japonica PE=2 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 8.009e-21
Identity = 50/144 (34.72%), Postives = 85/144 (59.03%), Query Frame = 2
Query:  134 LQSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            L  LF K+EM + ++GL  AGKT+++  +  G      IPT+GFN+      N++  +WD+GGQ + R +W  Y +    +++VVD+ D + +  +R EL  +LN+  L    LLV  NK D P A++  ++ +++GL S+ +R
Sbjct:    9 LDRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLNEDELRDAVLLVFANKQDLPNAMNPAEITDKLGLHSLRNR 151          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARF_CRYNE (ADP-ribosylation factor OS=Cryptococcus neoformans GN=ARF PE=1 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 8.009e-21
Identity = 50/144 (34.72%), Postives = 84/144 (58.33%), Query Frame = 2
Query:  134 LQSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            L  LF K+EM + ++GL  AGKT+++  +  G      IPT+GFN+      N++  +WD+GGQ + R +W  Y +    I++VVD+ D + +  +R EL  +L++  L    LLV  NK D P A++  ++ +++GL S+  R
Sbjct:    9 LNGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERITEAREELQRMLSEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSLRQR 151          
The following BLAST results are available for this feature:
BLAST of EY684688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
ARF_NEUCR4.695e-2136.17ADP-ribosylation factor OS=Neurospora crassa GN=NC... [more]
SAR1B_MOUSE6.132e-2135.71GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b... [more]
ARL1_BOVIN6.132e-2136.24ADP-ribosylation factor-like protein 1 OS=Bos taur... [more]
ARL11_MOUSE6.132e-2137.31ADP-ribosylation factor-like protein 11 OS=Mus mus... [more]
SAR1B_HUMAN8.009e-2135.71GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B... [more]
ARL1_RAT8.009e-2136.24ADP-ribosylation factor-like protein 1 OS=Rattus n... [more]
ARL1_MOUSE8.009e-2136.24ADP-ribosylation factor-like protein 1 OS=Mus musc... [more]
ARL1_CAEEL8.009e-2135.57ADP-ribosylation factor-like protein 1 OS=Caenorha... [more]
ARF_DUGJA8.009e-2134.72ADP-ribosylation factor OS=Dugesia japonica PE=2 S... [more]
ARF_CRYNE8.009e-2134.72ADP-ribosylation factor OS=Cryptococcus neoformans... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-002-C09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684688 ID=EY684688; Name=EY684688; organism=Citrus sinensis; type=EST; length=763bp
AATTGTAGGAGAAAAGAGAAGAAGCAAGAAAAGTTTTTTCGCTTTTTCCC
AGCTTTTATACTTCAAAGGCGAAACCCTAGCTTCTTATTTTGTCGAATAA
AAGATGGGATTATGGGAAGCTTTTCTCAACTGGCTTCAAAGTCTCTTCTT
TAAACAAGAAATGGAGCTATCTTTGATAGGGCTTCAGAATGCAGGCAAGA
CATCCCTTGTGAATGTTATCGCAACTGGTGGATATAGTGAAGATATGATC
CCAACAGTAGGATTTAATATGAGGAAAGAGACTAAGGGGAATGTCACAAT
AAAGCTGTGGGATCTTGGAGGCCAACCACGGTTTCGCAGTATGTGGGAGA
GATACTGTCGTGCAGTTTCAGCTATTGTTTACGTTGTTGATGCTGCTGAT
TATGATAACTTGCCTGCGTCAAGAAGTGAACTCCATGACTTGTTAAATAA
AGCCTCGCTGAATGGTATCCCATTGCTGGTACTGGGAAACAAGATTGATA
AACCATAAGCCTTGTCTAAAGAGGATCTGATGGAACAAATGGGGCTGAAG
TCCATTACCGATAGAAAAGTTGTTGCTACATGATTTCATGCAAGAACTCT
ACCAACATTGAAAAGGCTATTGATTGGCCTGTAAAGCATTCAAAAACCAA
AGAGTGAAGTTTCTACCCTCTAGTATAGACACCAATGGGAAGCCTGTTAT
ACAGAACTTGGAATTATGGAAAAATTACAAGGAAGATGAATTGGTAAAGG
CACCGTCGCACCA
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