EY684688

Overview
NameEY684688
Unique NameEY684688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: SAR1A_PONAB (GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.780e-20
Identity = 54/154 (35.06%), Postives = 92/154 (59.74%), Query Frame = 2
Query:  110 LWEAFLNWLQSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDRK 568
            ++  F + LQ L  +K+  +L  +GL NAGKT+L++++      +  +PT+     + T   +T   +DLGG  + R +W+ Y  A++ IV++VD AD+  L  S+ EL+ L+   +++ +P+L+LGNKID+  A+S+E L E  GL   T  K
Sbjct:    8 IYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGK 160          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: SAR1A_HUMAN (GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.780e-20
Identity = 54/154 (35.06%), Postives = 92/154 (59.74%), Query Frame = 2
Query:  110 LWEAFLNWLQSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDRK 568
            ++  F + LQ L  +K+  +L  +GL NAGKT+L++++      +  +PT+     + T   +T   +DLGG  + R +W+ Y  A++ IV++VD AD+  L  S+ EL+ L+   +++ +P+L+LGNKID+  A+S+E L E  GL   T  K
Sbjct:    8 IYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGK 160          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: SAR1A_PIG (GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.855e-20
Identity = 54/154 (35.06%), Postives = 92/154 (59.74%), Query Frame = 2
Query:  110 LWEAFLNWLQSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDRK 568
            ++  F + LQ L  +K+  +L  +GL NAGKT+L++++      +  +PT+     + T   +T   +DLGG  + R +W+ Y  A++ IV++VD AD+  L  S+ EL+ L+   +++ +P+L+LGNKID+  A+S+E L E  GL   T  K
Sbjct:    8 IYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGK 160          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: SAR1A_BOVIN (GTP-binding protein SAR1a OS=Bos taurus GN=SAR1A PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.855e-20
Identity = 54/154 (35.06%), Postives = 92/154 (59.74%), Query Frame = 2
Query:  110 LWEAFLNWLQSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDRK 568
            ++  F + LQ L  +K+  +L  +GL NAGKT+L++++      +  +PT+     + T   +T   +DLGG  + R +W+ Y  A++ IV++VD AD+  L  S+ EL+ L+   +++ +P+L+LGNKID+  A+S+E L E  GL   T  K
Sbjct:    8 IYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGK 160          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARL3_XENLA (ADP-ribosylation factor-like protein 3 OS=Xenopus laevis GN=arl3 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.855e-20
Identity = 48/137 (35.04%), Postives = 78/137 (56.93%), Query Frame = 2
Query:  155 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            QE+ + L+GL NAGKT+L+  +A+   S  + PT GFN++        + +WD+GGQ + R  W  Y      ++YV+D+AD      +  EL +LL++  L+G+P+L+  NK D   A    ++ E + L +I DR
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISH-ITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDR 151          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARL11_HUMAN (ADP-ribosylation factor-like protein 11 OS=Homo sapiens GN=ARL11 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.855e-20
Identity = 51/138 (36.96%), Postives = 83/138 (60.14%), Query Frame = 2
Query:  152 KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRK-ETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITD 562
            K E ++ ++GL +AGKT+L+  +  G    + +PTVGFN+   +  G+V++ LWD+GGQ   R+ W+ Y      +VYV+D+ D   LP S +EL ++LN  ++ G+P LVL NK + P AL    +  ++ L+   D
Sbjct:   10 KAEAQVVMMGLDSAGKTTLLYKLK-GHQLVETLPTVGFNVEPLKAPGHVSLTLWDVGGQAPLRASWKDYLEGTDILVYVLDSTDEARLPESAAELTEVLNDPNMAGVPFLVLANKQEAPDALPLLKIRNRLSLERFQD 146          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARF2_RAT (ADP-ribosylation factor 2 OS=Rattus norvegicus GN=Arf2 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.855e-20
Identity = 50/148 (33.78%), Postives = 85/148 (57.43%), Query Frame = 2
Query:  122 FLNWLQSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            F    +SLF K+EM + ++GL  AGKT+++  +  G      IPT+GFN+      N++  +WD+GGQ + R +W  Y +    +++VVD+ D + +  +R EL  +L +  L    LLV  NK D P A++  ++ +++GL S+  R
Sbjct:    5 FEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQR 151          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARF2_MOUSE (ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 8.855e-20
Identity = 50/148 (33.78%), Postives = 85/148 (57.43%), Query Frame = 2
Query:  122 FLNWLQSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            F    +SLF K+EM + ++GL  AGKT+++  +  G      IPT+GFN+      N++  +WD+GGQ + R +W  Y +    +++VVD+ D + +  +R EL  +L +  L    LLV  NK D P A++  ++ +++GL S+  R
Sbjct:    5 FEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQR 151          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: ARF2_BOVIN (ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.855e-20
Identity = 50/148 (33.78%), Postives = 85/148 (57.43%), Query Frame = 2
Query:  122 FLNWLQSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDR 565
            F    +SLF K+EM + ++GL  AGKT+++  +  G      IPT+GFN+      N++  +WD+GGQ + R +W  Y +    +++VVD+ D + +  +R EL  +L +  L    LLV  NK D P A++  ++ +++GL S+  R
Sbjct:    5 FEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQR 151          
BLAST of EY684688 vs. ExPASy Swiss-Prot
Match: SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum GN=SAR2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.156e-19
Identity = 57/156 (36.54%), Postives = 89/156 (57.05%), Query Frame = 2
Query:  104 MGLWEAFLNWLQSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKETKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPASRSELHDLLNKASLNGIPLLVLGNKIDKP*ALSKEDLMEQMGLKSITDRK 568
            M L + F   L SL  ++++ ++  +GL NAGKT+L++++      +   PT      + + GN+  K +DLGG    R +W  Y   V A+VY+VDA D +  P ++ EL  LL+  SL  +P L+LGNKID P A S+++L   +GL  +T  K
Sbjct:    1 MFLVDWFYGVLASLGLWQKDAKILFLGLDNAGKTTLLHMLKDERLVQHQ-PTQYPTSEELSIGNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLTNVPFLILGNKIDIPYAASEDELRYHLGLTGVTTGK 155          
The following BLAST results are available for this feature:
BLAST of EY684688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
SAR1A_PONAB6.780e-2035.06GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A... [more]
SAR1A_HUMAN6.780e-2035.06GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A... [more]
SAR1A_PIG8.855e-2035.06GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A P... [more]
SAR1A_BOVIN8.855e-2035.06GTP-binding protein SAR1a OS=Bos taurus GN=SAR1A P... [more]
ARL3_XENLA8.855e-2035.04ADP-ribosylation factor-like protein 3 OS=Xenopus ... [more]
ARL11_HUMAN8.855e-2036.96ADP-ribosylation factor-like protein 11 OS=Homo sa... [more]
ARF2_RAT8.855e-2033.78ADP-ribosylation factor 2 OS=Rattus norvegicus GN=... [more]
ARF2_MOUSE8.855e-2033.78ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 ... [more]
ARF2_BOVIN8.855e-2033.78ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE... [more]
SAR2_SOLLC1.156e-1936.54GTP-binding protein SAR2 OS=Solanum lycopersicum G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-002-C09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684688 ID=EY684688; Name=EY684688; organism=Citrus sinensis; type=EST; length=763bp
AATTGTAGGAGAAAAGAGAAGAAGCAAGAAAAGTTTTTTCGCTTTTTCCC
AGCTTTTATACTTCAAAGGCGAAACCCTAGCTTCTTATTTTGTCGAATAA
AAGATGGGATTATGGGAAGCTTTTCTCAACTGGCTTCAAAGTCTCTTCTT
TAAACAAGAAATGGAGCTATCTTTGATAGGGCTTCAGAATGCAGGCAAGA
CATCCCTTGTGAATGTTATCGCAACTGGTGGATATAGTGAAGATATGATC
CCAACAGTAGGATTTAATATGAGGAAAGAGACTAAGGGGAATGTCACAAT
AAAGCTGTGGGATCTTGGAGGCCAACCACGGTTTCGCAGTATGTGGGAGA
GATACTGTCGTGCAGTTTCAGCTATTGTTTACGTTGTTGATGCTGCTGAT
TATGATAACTTGCCTGCGTCAAGAAGTGAACTCCATGACTTGTTAAATAA
AGCCTCGCTGAATGGTATCCCATTGCTGGTACTGGGAAACAAGATTGATA
AACCATAAGCCTTGTCTAAAGAGGATCTGATGGAACAAATGGGGCTGAAG
TCCATTACCGATAGAAAAGTTGTTGCTACATGATTTCATGCAAGAACTCT
ACCAACATTGAAAAGGCTATTGATTGGCCTGTAAAGCATTCAAAAACCAA
AGAGTGAAGTTTCTACCCTCTAGTATAGACACCAATGGGAAGCCTGTTAT
ACAGAACTTGGAATTATGGAAAAATTACAAGGAAGATGAATTGGTAAAGG
CACCGTCGCACCA
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