EY684656

Overview
NameEY684656
Unique NameEY684656
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684656 vs. ExPASy Swiss-Prot
Match: FRS6_ARATH (Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.084e-16
Identity = 65/209 (31.10%), Postives = 101/209 (48.33%), Query Frame = 1
Query:   16 ALASWHEKEFKADYDT-TNCTPFLKTPSPMEKQAANLYTRRVFMKFQEELVETLAN-SATKIDDAGAVTTYHVAKFGEDHKART------VSFNSIEMKASCSCQMFEYSGIICRHVLAVFRAKNVLTLPSQYILKRWTRNAKTGPAADE-LASDMPNSDRESLTVRYNNLRQEAIKYVEEGAKSIHVYNVAMDALREAAKKVTAAKNQ 615
            AL   H +E  +D ++ T  T  LKT    E Q + +YTR +F KFQ E+ E  +  S T++   G    + V +      +R       V +N    +  C C  F + G +CRH L V     V  +P +YIL RW ++ K    AD  L   +  +DR      ++ L + +++ VEEGA S+  Y VAM  L+E+  KV + + +
Sbjct:  496 ALQKKHREETLSDIESQTLNTAELKTKCSFETQLSRIYTRDMFKKFQIEVEEMYSCFSTTQVHVDGPFVIFLVKERVRGESSRREIRDFEVLYNRSVGEVRCICSCFNFYGYLCRHALCVLNFNGVEEIPLRYILPRWRKDYKRLHFADNGLTGFVDGTDRVQW---FDQLYKNSLQVVEEGAVSLDHYKVAMQVLQESLDKVHSVEEK 701          
BLAST of EY684656 vs. ExPASy Swiss-Prot
Match: FRS8_ARATH (Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana GN=FRS8 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.154e-16
Identity = 60/198 (30.30%), Postives = 97/198 (48.99%), Query Frame = 1
Query:   31 HEKEFKADYDTTNCTPFLKTPSPMEKQAANLYTRRVFMKFQEEL-VETLANSATKIDDAGAVTTYHVAKFGEDHKARTVSF-----NSIEMKASCSCQMFEYSGIICRHVLAVFRAKNVLTLPSQYILKRWTRNAKTGPAADELAS---DMPNSDRESLTVRYNNLRQEAIKYVEEGAKSIHVYNVAMDALREAAKKV 597
            + +E   D ++    P LKT  P E Q A ++T  +F +FQ+E+   +     T++   G+ ++Y V K  E  K R          + +++  C C  F ++G  CRHVL +     +  +P QYIL+RW ++ K    A E  S   D+ N D+      Y +L + A++ VE+G +S      A +A RE A KV
Sbjct:  498 YTREALCDSESLKLIPKLKTTHPYESQMAKVFTMEIFRRFQDEVSAMSSCFGVTQVHSNGSASSY-VVKEREGDKVRDFEVIYETSAAAQVRCFCVCGGFSFNGYQCRHVLLLLSHNGLQEVPPQYILQRWRKDVKRLYVA-EFGSGRVDIMNPDQ-----WYEHLHRRAMQVVEQGMRSKEHCRAAWEAFRECANKV 688          
BLAST of EY684656 vs. ExPASy Swiss-Prot
Match: FRS11_ARATH (Protein FAR1-RELATED SEQUENCE 11 OS=Arabidopsis thaliana GN=FRS11 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.620e-12
Identity = 53/163 (32.52%), Postives = 78/163 (47.85%), Query Frame = 1
Query:   82 LKTPSPMEKQAANLYTRRVFMKFQEELVETLANSATKIDDAGAVTTYHVAKFGEDHKARTVSFNSIEMKASCSCQMFEYSGIICRHVLAVFRAKNVLTLPSQYILKRWTRNAKTGPAADELASDMPNSDRESLTVRYNNLRQEAIKYVEEGAKSIHVYNVAMD 570
            LKT +PME  AA++ T   F K QE+LV     ++ ++D+ G +  +H    G     R V +   E   SCSCQ+FE+SG +CRH L V    N   +P +Y+  RW R + +        S    S+ E    R   L+      V E AKS    ++A +
Sbjct:  500 LKTGAPMESHAASVLTPFAFSKLQEQLVLAAHYASFQMDE-GYLVRHHTKLDG----GRKVYWVPQEGIISCSCQLFEFSGFLCRHALRVLSTGNCFQVPDRYLPLRWRRISTS-------FSKTFRSNAEDHGERVQLLQNLVSTLVSESAKSKERLDIATE 650          
BLAST of EY684656 vs. ExPASy Swiss-Prot
Match: FRS10_ARATH (Putative protein FAR1-RELATED SEQUENCE 10 OS=Arabidopsis thaliana GN=FRS10 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.054e-11
Identity = 38/114 (33.33%), Postives = 57/114 (50.00%), Query Frame = 1
Query:   76 PFLKTPSPMEKQAANLYTRRVFMKFQEELVETLANSATKIDDAGAVTTYHVAKFGEDHKARTVSFNSIEMKASCSCQMFEYSGIICRHVLAVFRAKNVLTLPSQYILKRWTRNA 417
            P LKT  PME  A  + T   F   Q E+V ++  +  ++ +   +  ++    GE      V +N    +  CSC+ FE+SGI+CRH L V   KN   +P QY L RW + +
Sbjct:  511 PSLKTCMPMEDHARGILTPYAFSVLQNEMVLSVQYAVAEMANGPFIVHHYKKMEGEC----CVIWNPENEEIQCSCKEFEHSGILCRHTLRVLTVKNCFHIPEQYFLLRWRQES 620          
The following BLAST results are available for this feature:
BLAST of EY684656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
FRS6_ARATH1.084e-1631.10Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis tha... [more]
FRS8_ARATH3.154e-1630.30Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis tha... [more]
FRS11_ARATH1.620e-1232.52Protein FAR1-RELATED SEQUENCE 11 OS=Arabidopsis th... [more]
FRS10_ARATH3.054e-1133.33Putative protein FAR1-RELATED SEQUENCE 10 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-G08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684656 ID=EY684656; Name=EY684656; organism=Citrus sinensis; type=EST; length=849bp
CCACGCGTCCGGAAAGCTTTAGCAAGTTGGCATGAGAAGGAATTTAAAGC
AGATTATGACACCACTAACTGTACACCATTTCTGAAGACACCATCTCCTA
TGGAAAAACAAGCAGCGAACCTCTATACAAGAAGAGTATTCATGAAATTT
CAAGAGGAATTGGTTGAAACGCTTGCTAATTCTGCAACTAAAATTGATGA
TGCAGGAGCGGTCACCACATATCATGTGGCCAAATTTGGGGAAGACCACA
AAGCACGAACTGTCAGTTTTAATTCTATTGAGATGAAAGCTAGCTGCAGC
TGCCAGATGTTTGAATATTCGGGAATAATTTGTCGGCATGTATTAGCTGT
TTTTAGAGCAAAAAATGTTCTCACACTTCCTTCTCAATATATATTAAAAC
GATGGACAAGAAACGCCAAGACTGGACCTGCAGCAGATGAGCTTGCATCT
GACATGCCAAACAGTGACCGAGAATCTTTAACAGTTCGATATAACAACCT
ACGCCAGGAAGCAATCAAATATGTAGAAGAAGGGGCAAAATCGATTCATG
TCTATAATGTGGCAATGGATGCTTTAAGAGAAGCTGCTAAGAAGGTTACT
GCTGCCAAGAATCAAGGTTCTGGAGGCACTGACAGCAGCACTTTTATCAA
TGGAGGTAGCCAGGACTCACGTGCAGCTGAGGGACCTCAAGCCCCATACA
TCAATCTGTGGGGATGAAAAGGAGAAGAAATTCCTGAAATGACTGCTGAG
TTGGAGAATATAATCAACGATGTGAAGTGTACAGAGCAAATCTGCTGGCT
GGTCTGAAAGATTGGGAAAAACAGAGGTTGAAGCTCTCAGTGAAGGTGC
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