EY684646

Overview
NameEY684646
Unique NameEY684646
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8808 contig Csv1_Contig8808:1..859. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.759e-27
Identity = 51/157 (32.48%), Postives = 79/157 (50.32%), Query Frame = 3
Query:  231 ISDYFQTYQFENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPLKLIY*TTPNNLKNNATLTFSGS 701
            IS+   +  F+ +   RN        F+ Y++FITAA  ++  GFGT+      ++EVAAF      +T+ G+  A  G  AWG CY +E      YC    +  +PC PG  Y+GRG + + +NYNYG  G  +       P+ +  NA ++F  +
Sbjct:   85 ISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFR--GFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQ--WPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSA 237          

HSP 2 Score: 43.1282 bits (100), Expect = 4.759e-27
Identity = 19/52 (36.54%), Postives = 28/52 (53.85%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGG 846
            F++A+W WMT      P+ HD   G W P+  +  A R  G+G    ++NGG
Sbjct:  234 FKSAIWFWMTAQSPK-PSCHDVITGRWTPSAADRAANRLPGYGVITNIINGG 284          
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 6.200e-27
Identity = 50/145 (34.48%), Postives = 75/145 (51.72%), Query Frame = 3
Query:  258 FENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPLKLIY*TTPNNLKNNATLTF 692
            F+ +   RN     A GF+ Y +F+ AA  +   GFGT+      ++EVAAFL     +T+ G+  A  G  AWG C+ +E      YC    +  +PC PG SY+GRG + L  NYNYG  G  + +     P+ +  + T++F
Sbjct:   89 FDRMLLHRNDGACQAKGFYTYDAFVAAAGAFP--GFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQ--WPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSF 229          

HSP 2 Score: 42.743 bits (99), Expect = 6.200e-27
Identity = 20/52 (38.46%), Postives = 27/52 (51.92%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGG 846
            F+ AMW WMT      P++H    G W P+  +  A R  GFG    ++NGG
Sbjct:  229 FKTAMWFWMTAQAPK-PSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGG 279          
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.315e-26
Identity = 47/126 (37.30%), Postives = 66/126 (52.38%), Query Frame = 3
Query:  258 FENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPL 635
            FE L   RN     A GF+ Y + +TAAA +    F  +      ++EVAAFLG    +T+ G+  A  GP +WG C+ +E+     YC    +  +PC P   Y GRG + L +NYNYG  GE +
Sbjct:   95 FEQLLLHRNDAACPARGFYTYDALVTAAAAFPD--FAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAE--WPCAPDKKYFGRGPIQLSYNYNYGPAGEAI 216          

HSP 2 Score: 46.595 bits (109), Expect = 2.315e-26
Identity = 20/52 (38.46%), Postives = 28/52 (53.85%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGG 846
            F+ A+W WMTP     P+ HD   G W P+  +  A R  G+G    ++NGG
Sbjct:  235 FKTALWFWMTPQSPK-PSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGG 285          
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.127e-25
Identity = 55/191 (28.80%), Postives = 85/191 (44.50%), Query Frame = 3
Query:  177 CDK-GWECKGWSEYC----CNQT----------ISDYFQTYQFENLFAKRNTPVAHAVG-FWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPLKLIY*TTPNNLKNNATLTFSGS 701
            C K GW C   +EYC    C             +        F+ +   RN         F+ Y++F+TAA  +   GFGT+      ++E+AAFL     +T+ G+  A  GP AWG C+ +E      YC    +  +PC PG  Y GRG + +  NYNYG  G  + +     P+ +  +  ++F  +
Sbjct:   40 CSKFGW-CGNTNEYCGPGNCQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFP--GFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQ--WPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSA 225          

HSP 2 Score: 48.521 bits (114), Expect = 1.127e-25
Identity = 21/52 (40.38%), Postives = 30/52 (57.69%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGG 846
            F++A+W WMTP     P+ HD   G W+P+  +  A R  GFG    ++NGG
Sbjct:  222 FKSAIWFWMTPQSPK-PSCHDVITGRWQPSGADQAANRVPGFGVITNIINGG 272          
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.127e-25
Identity = 54/189 (28.57%), Postives = 86/189 (45.50%), Query Frame = 3
Query:  177 CDK-GWECKGWSEYC----CNQT--------ISDYFQTYQFENLFAKRNTPVAHAVG-FWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPLKLIY*TTPNNLKNNATLTFSGS 701
            C K GW C   ++YC    C           +        F+ +   RN       G F+ Y++FI+AA  +   GFGT+      ++E+AAF      +T+ G+  A  GP AWG C+ +E      YC    +  +PC PG  Y GRG + +  NYNYG  G  + +     P+ +  ++ ++F  +
Sbjct:   36 CSKFGW-CGNTNDYCGPGNCQSQCPGGSPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFP--GFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQ--WPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSA 219          

HSP 2 Score: 49.2914 bits (116), Expect = 1.127e-25
Identity = 21/52 (40.38%), Postives = 30/52 (57.69%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGG 846
            F++A+W WMTP     P+ HD   G W+P+  +  A R  GFG    ++NGG
Sbjct:  216 FKSAIWFWMTPQSPK-PSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGG 266          
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.131e-25
Identity = 49/155 (31.61%), Postives = 77/155 (49.68%), Query Frame = 3
Query:  228 TISDYFQTYQFENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPLKLIY*TTPNNLKNNATLTF 692
            ++S      QF+ +   RN     A GF+ Y +F+ AA  +   GFG +      +++VAAFL     +T+ G+  A  G  AWG C+ +E      YC    +  +PC PG  Y+GRG + L  NYNYG  G  + +     P+ +  + T++F
Sbjct:   24 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFP--GFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQ--WPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSF 174          

HSP 2 Score: 42.3578 bits (98), Expect = 1.131e-25
Identity = 19/52 (36.54%), Postives = 27/52 (51.92%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGG 846
            F+ A+W WMT      P++H    G W P+  +  A R  GFG    ++NGG
Sbjct:  174 FKTALWFWMTAQAPK-PSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGG 224          
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.908e-25
Identity = 46/145 (31.72%), Postives = 71/145 (48.97%), Query Frame = 3
Query:  258 FENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPLKLIY*TTPNNLKNNATLTF 692
            F+ +   RN        F+ Y++FI AA  +   GFGTS      ++E+AAF      +T+ G+  A  GP AWG C+ +E      YC    +  +PC PG  Y GRG + +  NYNYG  G  + +     P+ +  +  ++F
Sbjct:   88 FDQMLKHRNENSCQGKNFYSYNAFINAARSFP--GFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSSQ--WPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISF 228          

HSP 2 Score: 49.2914 bits (116), Expect = 1.908e-25
Identity = 21/52 (40.38%), Postives = 29/52 (55.77%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGG 846
            F+ A+W WMTP     P+ HD  +G W P+  +  A R  GFG    ++NGG
Sbjct:  228 FKTALWFWMTPQSPK-PSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGG 278          
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.909e-25
Identity = 49/146 (33.56%), Postives = 78/146 (53.42%), Query Frame = 3
Query:  258 FENLFAKRNTPVAHAVGFWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQ-IYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPLKLIY*TTPNNLKNNATLTF 692
            F+ +   RN     A GF+ Y +F+ AA  Y    F T+      ++EVAAFL     +T+ G+  A  GP +WG C+ +E + N   YC+   K  +PC  G  Y+GRG + + +NYNYG  G+ +       P+ + ++AT++F
Sbjct:   85 FDQMLLHRNDQACAAKGFYTYDAFVAAANAYPD--FATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEP--KPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSF 226          

HSP 2 Score: 44.2838 bits (103), Expect = 1.909e-25
Identity = 20/56 (35.71%), Postives = 28/56 (50.00%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGGPVVG 858
            F+ A W WMTP     P+ H    G W P+ ++  A R  G+G    ++NGG   G
Sbjct:  226 FKTAFWFWMTPQSPK-PSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECG 280          
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.485e-25
Identity = 56/200 (28.00%), Postives = 88/200 (44.00%), Query Frame = 3
Query:  165 GKKLCDKGWECK--GW----SEYC----CNQT----------ISDYFQTYQFENLFAKRNTPVAHAVG-FWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPLKLIY*TTPNNLKNNATLTFSGS 701
            G  LC  G  C   GW    ++YC    C             +        F+ +   RN       G F+ Y++FI+AA  +   GFGT+      ++E+AAF      +T+ G+  A  GP AWG C+ +E      YC    +  +PC PG  Y GRG + +  NYNYG  G  + +     P+ +  ++ ++F  +
Sbjct:   26 GGALCASGLCCSKFGWCGDTNDYCGPGNCQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFP--GFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQ--WPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSA 221          

HSP 2 Score: 48.1358 bits (113), Expect = 2.485e-25
Identity = 21/52 (40.38%), Postives = 30/52 (57.69%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGG 846
            F++A+W WMTP     P+ HD   G W+P+  +  A R  GFG    ++NGG
Sbjct:  218 FKSAIWFWMTPQSPK-PSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGG 268          
BLAST of EY684646 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 5.478e-25
Identity = 54/191 (28.27%), Postives = 86/191 (45.03%), Query Frame = 3
Query:  177 CDK-GWECKGWSEYC----CNQT----------ISDYFQTYQFENLFAKRNTPVAHAVG-FWDYHSFITAAALYQPHGFGTSAGKLMGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEPLKLIY*TTPNNLKNNATLTFSGS 701
            C K GW C   ++YC    C             +        F+ +   RN         F+ Y++FI+AA  +   GFGT+      ++E+AAFL     +T+ G+  A  GP AWG C+ +E      YC    +  +PC PG  Y GRG + +  NYNYG  G  + +     P+ +  ++ ++F  +
Sbjct:   36 CSKFGW-CGNTNDYCGPGNCQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFP--GFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQ--WPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSA 221          

HSP 2 Score: 48.521 bits (114), Expect = 5.478e-25
Identity = 21/52 (40.38%), Postives = 30/52 (57.69%), Query Frame = 1
Query:  691 FQAAMWKWMTPMXKH*PAAHDPFVGNWKPTKNEPWAKRGLGFGPTMKVLNGG 846
            F++A+W WMTP     P+ HD   G W+P+  +  A R  GFG    ++NGG
Sbjct:  218 FKSAIWFWMTPQSPK-PSCHDVITGRWQPSGADQAANRVPGFGVITNIINGG 268          
The following BLAST results are available for this feature:
BLAST of EY684646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
CHI3_TOBAC4.759e-2732.48Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3... [more]
CHIA_SECCE6.200e-2734.48Basic endochitinase A OS=Secale cereale GN=rsca PE... [more]
CHI9_ORYSJ2.315e-2637.30Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIC_SOLLC1.127e-2528.80Basic 30 kDa endochitinase OS=Solanum lycopersicum... [more]
CHI2_SOLTU1.127e-2528.57Endochitinase 2 (Fragment) OS=Solanum tuberosum GN... [more]
CHIC_SECCE1.131e-2531.61Basic endochitinase C OS=Secale cereale GN=rscc PE... [more]
CHIT_SOLTU1.908e-2531.72Endochitinase OS=Solanum tuberosum PE=2 SV=1[more]
CHI3_ORYSJ1.909e-2533.56Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI1_SOLTU2.485e-2528.00Endochitinase 1 (Fragment) OS=Solanum tuberosum GN... [more]
CHI3_SOLTU5.478e-2528.27Endochitinase 3 (Fragment) OS=Solanum tuberosum GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-F08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684646 ID=EY684646; Name=EY684646; organism=Citrus sinensis; type=EST; length=859bp
CCACGCGTCCGAATTTCTAAACGTAGCTCATTTAATTTCCTCCCATTCAT
TTAGCTATGAAGCTCAAATGGCAGCTAGTACTTTTTGCAACGGCAATTTT
ATCAGTGCTAGTCATTGTGCATGGCGATGAATCTTCAGTGAAGCCATTAG
TGAAGATTGTGAAGGGCAAGAAATTGTGTGACAAAGGGTGGGAGTGTAAA
GGATGGTCTGAGTATTGCTGCAATCAAACGATATCGGATTACTTTCAGAC
TTACCAATTTGAGAACCTTTTTGCAAAGCGTAACACCCCTGTGGCTCATG
CTGTTGGGTTTTGGGACTACCATTCTTTTATAACCGCTGCTGCTTTATAT
CAGCCTCATGGGTTTGGTACCAGTGCAGGAAAGCTCATGGGTCAAAAGGA
AGTTGCTGCTTTTCTTGGCCACGTTGGAAGCAAAACCTCGTGTGGGTATG
GAGTGGCAACTGGTGGACCATTGGCTTGGGGTCTATGCTACAACAAGGAG
ATGAGTCCTAACCAGATATACTGCGATGATGACTTCAAATACACATATCC
TTGCACTCCTGGAGTTTCATATCATGGCCGCGGTGCCTTGCCCCTCTACT
GGAACTACAACTATGGGGAAACAGGAGAGCCCCTAAAGTTGATATATTGA
ACCACCCCGAATAACTTAAAAAACAATGCGACCCTAACCTTTTCAGGCAG
CAATGTGGAAGTGGATGACTCCAATGAANAAACATTAGCCCGCGGCGCAC
GACCCGTTCGTTGGTAACTGGAAACCTACCAAGAATGAACCTTGGGCCAA
AAGGGGGCTTGGATTCGGCCCAACCATGAAGGTCCTGAATGGGGGACCAG
TTGTGGGCA
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