EY684638
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_RHOPB (Indole-3-glycerol phosphate synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=trpC PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.574e-26 Identity = 62/134 (46.27%), Postives = 90/134 (67.16%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRL 405 YQ+VEARA GADC+L+I++ALDD ++ A ++G+DVL+E+H+ DELERALK L +P++GVNNRNL +FEV+L + ++ ESGI AD+ +E G+ +FLVGE+ MR + A + L Sbjct: 128 YQVVEARAHGADCILIIMAALDDAAAQDIEDAAIALGMDVLIEIHNRDELERALK-LRSPMIGVNNRNLRSFEVTLATSEALAPLIPADRLMVGESGIFAPADIARLERVGIATFLVGESLMRQHDVAAATRTL 260
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_RHOPT (Indole-3-glycerol phosphate synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=trpC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.361e-26 Identity = 64/134 (47.76%), Postives = 89/134 (66.42%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRL 405 YQ+VEARA GADC+L+I++ALDD + ++ A +G+DVL+EVHD ELERALK L +P+VGVNNRNL TFEV+L + ++ ESGI AD+ + G+ +FLVGE+ MR ++ A + L Sbjct: 128 YQVVEARAHGADCILIIMAALDDAEAKDIEDAAFDLGMDVLLEVHDAPELERALK-LRSPMVGVNNRNLRTFEVTLATSEALAPLIPKDRLMVGESGIFTPADLARLARVGMSTFLVGESLMRQQDVAAATRAL 260
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_RHOP5 (Indole-3-glycerol phosphate synthase OS=Rhodopseudomonas palustris (strain BisA53) GN=trpC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.361e-26 Identity = 63/146 (43.15%), Postives = 94/146 (64.38%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLFFPERGVAVSGS 441 YQ+VEARA GADC+L+I++ALDD ++ A +G+DVL+E+H+ DELERALK L +P++GVNNRNL TF+V+L + ++ ESGI AD+ +E G+ +FLVGE+ MR + A + L + + +G+ Sbjct: 128 YQVVEARAHGADCILIIMAALDDATAKDIEDAAIDLGMDVLIEIHNHDELERALK-LRSPMIGVNNRNLRTFDVTLATSEALAPLIPSERLMVGESGIFAPADLARLERVGIATFLVGESLMRQSDVTAATRALLARDAALRPTGT 272
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_RHIEC (Indole-3-glycerol phosphate synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=trpC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.361e-26 Identity = 64/142 (45.07%), Postives = 91/142 (64.08%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLFFPERGVA 429 YQ+ EARA GADC+LLI+++L D + L + S+G+DVLVEVHD E+ERALK L +PL+G+NNRNL TFEV L + ++ ESGI AD + ++ +G+ +FLVGE+ MR ++ A + L E +A Sbjct: 128 YQVHEARAWGADCILLIMASLTDDEAERLQDESFSLGMDVLVEVHDASEMERALK-LSSPLIGINNRNLRTFEVGLTVSETLASMVPDDRLLVGESGIFTHADCKRLQAAGINTFLVGESLMRKDDVTAATRALLVGEAAIA 268
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_NITWN (Indole-3-glycerol phosphate synthase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=trpC PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.734e-26 Identity = 62/134 (46.27%), Postives = 90/134 (67.16%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRL 405 YQ+VEARA GADC+L+I++ALDD ++ A A +G+DVL+E+H+ +EL+RALK L +P++GVNNRNL TFE +LE + ++ ESGI AD+ +E G+ +FLVGE+ MR + A + L Sbjct: 128 YQVVEARAHGADCILIIMAALDDDAAKDIEATALDLGMDVLLEIHNREELDRALK-LRSPMIGVNNRNLRTFETTLETSEGLAPYIPKERLMVGESGIFTPADLARLERVGISTFLVGESLMRQADVTAATRTL 260
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_AGRT5 (Indole-3-glycerol phosphate synthase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=trpC PE=3 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 5.734e-26 Identity = 64/141 (45.39%), Postives = 90/141 (63.83%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLFFPERGV 426 YQ+ EARA GADC+LLI+++L D + L A ++G+DVL+EVHD +E ERALK L +PL+G+NNRNL TFEV LE + ++ ESGI D + +E SG+ +FLVGE+ MR ++ A + L G+ Sbjct: 128 YQVHEARAWGADCILLIMASLSDDEAKRLEDEAFALGMDVLIEVHDAEETERALK-LTSPLLGINNRNLRTFEVGLETSEKLAGLVPADKLLVGESGIFTFEDCQRLEKSGISTFLVGESLMRKDDVTAATKALLTGHSGI 267
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_ACIBL (Indole-3-glycerol phosphate synthase OS=Acidobacteria bacterium (strain Ellin345) GN=trpC PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.734e-26 Identity = 66/135 (48.89%), Postives = 86/135 (63.70%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRL 405 P QIVEARA GAD +LLIV+AL D+ + L AK GLDVL EVHD DEL+RA L L+GVNNRNL TF V +EN+ + ESGI +R D++ + + +FL+GE+ MRA++P A L+ L Sbjct: 125 PAQIVEARAYGADAILLIVAALTDLDLRNLRDEAKRYGLDVLCEVHDRDELKRA-ADLGFDLIGVNNRNLKTFRVDIENSLRFAEEFPPNALRVAESGIHSREDIDRLRDAAYSAFLIGESLMRADSPSATLREL 258
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_RHOCA (Indole-3-glycerol phosphate synthase OS=Rhodobacter capsulatus GN=trpC PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.489e-26 Identity = 65/136 (47.79%), Postives = 87/136 (63.97%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENT-XXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRL 405 PYQ+ EARA GADC+L+I+++++D EL A A G+DVL+EVHDG EL+RALK L +PL+GVNNRNL TFEV+L+ T ++ ESGI R D+ M G FL+GE+ MR + A + L Sbjct: 124 PYQVAEARAWGADCILIIMASVEDALAVELEAAATGWGMDVLIEVHDGAELDRALKWLKSPLLGVNNRNLKTFEVTLDVTRHVAPVILAEGRELVCESGIFTR-DMAAMAAVGARRFLIGESLMRQADVAAATRAL 258
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_PROMM (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain MIT 9313) GN=trpC PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.780e-26 Identity = 66/150 (44.00%), Postives = 90/150 (60.00%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENT-----XXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLFFPERGVAVS 435 PYQ+ +ARA GAD LLIV+ L D + L+ VA S+GL+VLVEVHD +ELER L PL+G+NNR+L TFE LE T +++ESG+ NRAD++ ++ G + LVGE MR + A LQ+L + G + S Sbjct: 152 PYQLYQARAAGADAALLIVAILSDQDLTYLSKVANSLGLNVLVEVHDAEELERVLNLGGFPLIGINNRDLTTFETDLETTETLSQQFATRLQQQGVLLVSESGLFNRADLDRVQAVGAEAVLVGEALMRQSDVCAGLQQLMIGDEGTSNS 301
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_SPHWW (Indole-3-glycerol phosphate synthase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=trpC PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.277e-25 Identity = 63/135 (46.67%), Postives = 87/135 (64.44%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRL 405 P+Q+ EARALGAD +L+IV+ALDD +MAE+ A A G+D LVEVHD DE +RAL+ L + L+GVNNR+L F + T + ESG+ ++AD++ M GV FLVGE+ MR ++ A +RL Sbjct: 127 PWQVTEARALGADAILIIVAALDDGQMAEIEAAAIEHGMDALVEVHDADEFDRALR-LRSRLIGVNNRDLRDFTIDFARTYELVGHAPAGCTFVAESGLGSKADLDAMADHGVGCFLVGESLMRQDDLAAATRRL 260 The following BLAST results are available for this feature:
BLAST of EY684638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 383
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684638 ID=EY684638; Name=EY684638; organism=Citrus sinensis; type=EST; length=851bpback to top |