EY684638
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_BRUA2 (Indole-3-glycerol phosphate synthase OS=Brucella abortus (strain 2308) GN=trpC PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.663e-23 Identity = 59/135 (43.70%), Postives = 86/135 (63.70%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRL 405 PYQ+ EAR+ GADC+L+I++++DD EL A ++G+D L+EVHD E+ERALK L + L+GVNNRNL +FEV+L + ++ ESGI D +E SG+ +FL+GE+ MR + A + L Sbjct: 128 PYQVYEARSWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVHDEAEMERALK-LSSRLLGVNNRNLRSFEVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMRQHDVAAATRAL 261
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_BRUA1 (Indole-3-glycerol phosphate synthase OS=Brucella abortus (strain S19) GN=trpC PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.663e-23 Identity = 59/135 (43.70%), Postives = 86/135 (63.70%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRL 405 PYQ+ EAR+ GADC+L+I++++DD EL A ++G+D L+EVHD E+ERALK L + L+GVNNRNL +FEV+L + ++ ESGI D +E SG+ +FL+GE+ MR + A + L Sbjct: 128 PYQVYEARSWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVHDEAEMERALK-LSSRLLGVNNRNLRSFEVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMRQHDVAAATRAL 261
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_XANP2 (Indole-3-glycerol phosphate synthase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=trpC PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.479e-23 Identity = 60/134 (44.78%), Postives = 81/134 (60.45%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRL 405 YQ+ EARA GADC+L+I++ +DD+ +LA A + G+D +VEVHD ELERAL L L+G+NNRNL TFE SLE + I ESGI DV + G+ + LVGE+ MR E+ + +L Sbjct: 128 YQVAEARAWGADCILIIMAGVDDLLARDLADAAAAYGMDAIVEVHDDAELERAL-DLPCRLIGINNRNLRTFETSLETSERLAPRVPKDRIAIGESGIFTPQDVARLAKVGIGTILVGESLMRQEDVASATSQL 260
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_SALRD (Indole-3-glycerol phosphate synthase OS=Salinibacter ruber (strain DSM 13855) GN=trpC PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.479e-23 Identity = 60/135 (44.44%), Postives = 86/135 (63.70%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRL 405 PYQ+VEARA+GAD VLLI +ALD ++AEL A A +GL LVEV++ ++L++ + ++GVNNR+LHTFEV L+N+ + ESG+ + + + +GV L+GE MRAE+PG L RL Sbjct: 124 PYQLVEARAVGADAVLLIATALDPGQLAELHAAATELGLSCLVEVYEEEDLDK-IDWEQVSVLGVNNRDLHTFEVDLDNSLRIFDQTPKGVGRVAESGLSDPETLVRLRKAGVNGVLIGEHLMRAEHPGEALSRL 257
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_RHILO (Indole-3-glycerol phosphate synthase OS=Rhizobium loti GN=trpC PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.012e-22 Identity = 56/127 (44.09%), Postives = 81/127 (63.78%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAEN 381 PYQ+ EARA GAD +L+I++++DD + L A A +G+D L+EVHD E +RALK L + L+G+NNRNL TFE SLE + +++ESGI D ++ + +FLVGE+ MR E+ Sbjct: 127 PYQVYEARAWGADAILIIMASVDDALASALEATAFELGMDALIEVHDEAETQRALK-LSSRLIGINNRNLRTFETSLETSERLATMVPADRLLVSESGIFTHDDCLRLQKKDIGTFLVGESLMRQED 252
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_RHOSK (Indole-3-glycerol phosphate synthase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=trpC PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.255e-22 Identity = 57/123 (46.34%), Postives = 79/123 (64.23%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMR 372 YQ+ EARALGADC+L+I++++ D + EL A A G+DVLVEVH DEL RA + L + L+G+NNRNL TFEVSL+ T +++ESG+ D+ + G FL+GE+ MR Sbjct: 127 YQVAEARALGADCILIIMASVTDSQALELEAAASHWGMDVLVEVHSRDELARA-EHLKSRLIGINNRNLDTFEVSLDVTRDLARRVPEDRLIVSESGLYTPEDLADLARYGARCFLIGESLMR 248
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_RHOS1 (Indole-3-glycerol phosphate synthase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=trpC PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.255e-22 Identity = 57/123 (46.34%), Postives = 79/123 (64.23%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMR 372 YQ+ EARALGADC+L+I++++ D + EL A A G+DVLVEVH DEL RA + L + L+G+NNRNL TFEVSL+ T +++ESG+ D+ + G FL+GE+ MR Sbjct: 127 YQVAEARALGADCILIIMASVTDSQALELEAAASHWGMDVLVEVHSRDELARA-EHLKSRLIGINNRNLDTFEVSLDVTRDLARRVPEDRLIVSESGLYTPEDLADLARYGARCFLIGESLMR 248
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_NOVAD (Indole-3-glycerol phosphate synthase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=trpC PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.255e-22 Identity = 60/137 (43.80%), Postives = 84/137 (61.31%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLFF 411 P+Q +EARA+GAD +L+IV+AL D +MAE+ A A G+D LVEVH+ +E+ERA + L + L+GVNNR+L F L T ++ ESGI AD+ +E G +FLVGE+ MR + A + L F Sbjct: 126 PWQCLEARAIGADAILIIVAALSDQQMAEIEAAALEQGMDALVEVHNEEEMERAAR-LRSRLIGVNNRDLKRFVTDLATTERLAPLAPDGTLLVAESGINTHADLLRLEKCGARTFLVGESLMRQADVEAATRGLLF 261
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_RHOS5 (Indole-3-glycerol phosphate synthase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=trpC PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.945e-22 Identity = 56/126 (44.44%), Postives = 81/126 (64.29%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAEN 381 YQ+ EARALGADC+L+I++++ D + EL A A G+DVLVEVH +EL RA + L + L+G+NNRNL TFEVSL+ T +++ESG+ D+ + G FL+GE+ MR ++ Sbjct: 127 YQVAEARALGADCILIIMASVSDSQALELEAAASQWGMDVLVEVHSREELARA-EHLKSRLIGINNRNLDTFEVSLDVTRDLARRVPEDRLIVSESGLYTPDDLADLARYGARCFLIGESLMRQQD 251
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_CLOTH (Indole-3-glycerol phosphate synthase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=trpC PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.945e-22 Identity = 57/126 (45.24%), Postives = 83/126 (65.87%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAEN 381 +QI E+R +GAD +LLIVS L D ++ + VA +G+ LVEVHD ELERAL++ ++G+NNR+L TFEV L+NT V++ESGI + D++ ++ GV + L+GETFMRA + Sbjct: 125 WQIYESRYIGADAILLIVSLLSDEELKKFQIVANILGMQCLVEVHDERELERALES-GARIIGINNRDLRTFEVDLKNTEKLMNRIPNDRVVVSESGIKDTEDLKYLKELGVDAVLIGETFMRARS 249 The following BLAST results are available for this feature:
BLAST of EY684638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 383
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684638 ID=EY684638; Name=EY684638; organism=Citrus sinensis; type=EST; length=851bpback to top |