EY684638
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_ACIAD (Indole-3-glycerol phosphate synthase OS=Acinetobacter sp. (strain ADP1) GN=trpC PE=3 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 9.451e-29 Identity = 67/136 (49.26%), Postives = 86/136 (63.24%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408 PY +VEARAL ADC+LLIV+ L D ++ E++ A LDVLVEVHD ELERALK + L+GVNNRNL TF+V L + ++TESGI DV+LM+ ++SFLVGE+FM+ P LF Sbjct: 127 PYNVVEARALQADCILLIVACLSDQQLEEMSKTAFEYDLDVLVEVHDEQELERALKLSEQCLLGVNNRNLKTFDVDLNTSLRLKKLLDPSRLLVTESGIATPQDVQLMQEHDIHSFLVGESFMKQPRPDQAFTELF 262
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_ACIBY (Indole-3-glycerol phosphate synthase OS=Acinetobacter baumannii (strain AYE) GN=trpC PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.612e-28 Identity = 68/136 (50.00%), Postives = 86/136 (63.24%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408 PY +VEARAL ADC+LLIV+ L D ++ E++ A LDVLVEVHD +ELERALK + L+GVNNRNL TF+V L T +ITESGI DV +M+ ++SFLVGE+FM+ P LF Sbjct: 127 PYNVVEARALHADCILLIVACLSDQQLEEMSKTAFEHQLDVLVEVHDEEELERALKLSEQCLLGVNNRNLKTFDVDLNTTIRLKKLLPASRLLITESGIATPDDVRMMQEHDIHSFLVGESFMKQPRPDQAFTALF 262
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_ACIBT (Indole-3-glycerol phosphate synthase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=trpC PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.612e-28 Identity = 68/136 (50.00%), Postives = 86/136 (63.24%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408 PY +VEARAL ADC+LLIV+ L D ++ E++ A LDVLVEVHD +ELERALK + L+GVNNRNL TF+V L T +ITESGI DV +M+ ++SFLVGE+FM+ P LF Sbjct: 127 PYNVVEARALHADCILLIVACLSDQQLEEMSKTAFEHQLDVLVEVHDEEELERALKLSEQCLLGVNNRNLKTFDVDLNTTIRLKKLLPASRLLITESGIATPDDVRMMQEHDIHSFLVGESFMKQPRPDQAFTALF 262
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_ACIBS (Indole-3-glycerol phosphate synthase OS=Acinetobacter baumannii (strain SDF) GN=trpC PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.612e-28 Identity = 68/136 (50.00%), Postives = 86/136 (63.24%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408 PY +VEARAL ADC+LLIV+ L D ++ E++ A LDVLVEVHD +ELERALK + L+GVNNRNL TF+V L T +ITESGI DV +M+ ++SFLVGE+FM+ P LF Sbjct: 127 PYNVVEARALHADCILLIVACLSDQQLEEMSKTAFEHQLDVLVEVHDEEELERALKLSEQCLLGVNNRNLKTFDVDLNTTIRLKKLLPASRLLITESGIATPDDVRMMQEHDIHSFLVGESFMKQPRPDQAFTALF 262
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_ACIBC (Indole-3-glycerol phosphate synthase OS=Acinetobacter baumannii (strain ACICU) GN=trpC PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.612e-28 Identity = 68/136 (50.00%), Postives = 86/136 (63.24%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408 PY +VEARAL ADC+LLIV+ L D ++ E++ A LDVLVEVHD +ELERALK + L+GVNNRNL TF+V L T +ITESGI DV +M+ ++SFLVGE+FM+ P LF Sbjct: 127 PYNVVEARALHADCILLIVACLSDQQLEEMSKTAFEHQLDVLVEVHDEEELERALKLSEQCLLGVNNRNLKTFDVDLNTTIRLKKLLPASRLLITESGIATPDDVRMMQEHDIHSFLVGESFMKQPRPDQAFTALF 262
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_ACIB5 (Indole-3-glycerol phosphate synthase OS=Acinetobacter baumannii (strain AB0057) GN=trpC PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.612e-28 Identity = 68/136 (50.00%), Postives = 86/136 (63.24%), Query Frame = 1 Query: 1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408 PY +VEARAL ADC+LLIV+ L D ++ E++ A LDVLVEVHD +ELERALK + L+GVNNRNL TF+V L T +ITESGI DV +M+ ++SFLVGE+FM+ P LF Sbjct: 127 PYNVVEARALHADCILLIVACLSDQQLEEMSKTAFEHQLDVLVEVHDEEELERALKLSEQCLLGVNNRNLKTFDVDLNTTIRLKKLLPASRLLITESGIATPDDVRMMQEHDIHSFLVGESFMKQPRPDQAFTALF 262
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_LEGPL (Indole-3-glycerol phosphate synthase OS=Legionella pneumophila (strain Lens) GN=trpC PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.126e-28 Identity = 63/134 (47.01%), Postives = 91/134 (67.91%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRL 405 YQI E+ LGADC+LLIV+ LDDV++ + +A+ + + VLVE H DELERAL+ L TPL+G+NNR+LH F+ ++ + +ITESGI R D++LM+ + +FL+GE+ MRA+N G LQ+L Sbjct: 123 YQIYESLVLGADCILLIVALLDDVQLMDFCQLAQELKMSVLVESHTQDELERALR-LPTPLIGINNRSLHNFKTDIQLSIQLKQFVPKDKIIITESGINTREDIKLMQSHDINAFLIGESLMRADNIGKALQKL 255
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_RHIL3 (Indole-3-glycerol phosphate synthase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=trpC PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.040e-27 Identity = 66/142 (46.48%), Postives = 92/142 (64.79%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLFFPERGVA 429 YQ+ EARA GADC+LLI+++L D + L A ++G+DVLVEVHD +E+ERALK L +PL+G+NNRNL TFEVSL + ++ ESGI AD + ++ + +FLVGE+ MR E+ A + L F E +A Sbjct: 128 YQVHEARAWGADCILLIMASLSDDEAERLQDEAFALGMDVLVEVHDAEEMERALK-LSSPLIGINNRNLRTFEVSLTVSEALAPMVSADRLLVGESGIFTHADCKRLQAVDINTFLVGESLMRKEDVAAATRALLFGEAAIA 268
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_RHILW (Indole-3-glycerol phosphate synthase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=trpC PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.186e-27 Identity = 67/142 (47.18%), Postives = 92/142 (64.79%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLFFPERGVA 429 YQ+ EARA GADC+LLI+++L D + L A S+G+DVLVEVHD +E+ERALK L +PL+G+NNRNL TFEVSL + +I ESGI AD + ++ + +FLVGE+ MR ++ A + L F E +A Sbjct: 128 YQVHEARAWGADCILLIMASLTDDEAERLQDEAFSLGMDVLVEVHDAEEMERALK-LSSPLIGINNRNLRTFEVSLTVSETLASMVPADRLLIGESGIFTHADCKRLQAVDISTFLVGESLMRKDDVTAATRALLFGEAAIA 268
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_RHIE6 (Indole-3-glycerol phosphate synthase OS=Rhizobium etli (strain CIAT 652) GN=trpC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.509e-26 Identity = 65/142 (45.77%), Postives = 92/142 (64.79%), Query Frame = 1 Query: 4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLFFPERGVA 429 YQ+ EARA GADC+LLI+++L D + L + S+G+DVLVEVHD E+ERALK L +PL+G+NNRNL TFEVSL + ++ ESGI AD + ++ +G+ +FLVGE+ MR ++ A + L E +A Sbjct: 128 YQVHEARAWGADCILLIMASLTDDEAKRLQDESFSLGMDVLVEVHDAPEMERALK-LSSPLIGINNRNLRTFEVSLTVSETLASMVPDDRLLVGESGIFTHADCKRLQAAGINTFLVGESLMRKDDVTAATRALLVGEAAIA 268 The following BLAST results are available for this feature:
BLAST of EY684638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 383
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684638 ID=EY684638; Name=EY684638; organism=Citrus sinensis; type=EST; length=851bpback to top |