EY684638

Overview
NameEY684638
Unique NameEY684638
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_ACIAD (Indole-3-glycerol phosphate synthase OS=Acinetobacter sp. (strain ADP1) GN=trpC PE=3 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 9.451e-29
Identity = 67/136 (49.26%), Postives = 86/136 (63.24%), Query Frame = 1
Query:    1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408
            PY +VEARAL ADC+LLIV+ L D ++ E++  A    LDVLVEVHD  ELERALK  +  L+GVNNRNL TF+V L  +            ++TESGI    DV+LM+   ++SFLVGE+FM+   P      LF
Sbjct:  127 PYNVVEARALQADCILLIVACLSDQQLEEMSKTAFEYDLDVLVEVHDEQELERALKLSEQCLLGVNNRNLKTFDVDLNTSLRLKKLLDPSRLLVTESGIATPQDVQLMQEHDIHSFLVGESFMKQPRPDQAFTELF 262          
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_ACIBY (Indole-3-glycerol phosphate synthase OS=Acinetobacter baumannii (strain AYE) GN=trpC PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.612e-28
Identity = 68/136 (50.00%), Postives = 86/136 (63.24%), Query Frame = 1
Query:    1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408
            PY +VEARAL ADC+LLIV+ L D ++ E++  A    LDVLVEVHD +ELERALK  +  L+GVNNRNL TF+V L  T            +ITESGI    DV +M+   ++SFLVGE+FM+   P      LF
Sbjct:  127 PYNVVEARALHADCILLIVACLSDQQLEEMSKTAFEHQLDVLVEVHDEEELERALKLSEQCLLGVNNRNLKTFDVDLNTTIRLKKLLPASRLLITESGIATPDDVRMMQEHDIHSFLVGESFMKQPRPDQAFTALF 262          
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_ACIBT (Indole-3-glycerol phosphate synthase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=trpC PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.612e-28
Identity = 68/136 (50.00%), Postives = 86/136 (63.24%), Query Frame = 1
Query:    1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408
            PY +VEARAL ADC+LLIV+ L D ++ E++  A    LDVLVEVHD +ELERALK  +  L+GVNNRNL TF+V L  T            +ITESGI    DV +M+   ++SFLVGE+FM+   P      LF
Sbjct:  127 PYNVVEARALHADCILLIVACLSDQQLEEMSKTAFEHQLDVLVEVHDEEELERALKLSEQCLLGVNNRNLKTFDVDLNTTIRLKKLLPASRLLITESGIATPDDVRMMQEHDIHSFLVGESFMKQPRPDQAFTALF 262          
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_ACIBS (Indole-3-glycerol phosphate synthase OS=Acinetobacter baumannii (strain SDF) GN=trpC PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.612e-28
Identity = 68/136 (50.00%), Postives = 86/136 (63.24%), Query Frame = 1
Query:    1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408
            PY +VEARAL ADC+LLIV+ L D ++ E++  A    LDVLVEVHD +ELERALK  +  L+GVNNRNL TF+V L  T            +ITESGI    DV +M+   ++SFLVGE+FM+   P      LF
Sbjct:  127 PYNVVEARALHADCILLIVACLSDQQLEEMSKTAFEHQLDVLVEVHDEEELERALKLSEQCLLGVNNRNLKTFDVDLNTTIRLKKLLPASRLLITESGIATPDDVRMMQEHDIHSFLVGESFMKQPRPDQAFTALF 262          
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_ACIBC (Indole-3-glycerol phosphate synthase OS=Acinetobacter baumannii (strain ACICU) GN=trpC PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.612e-28
Identity = 68/136 (50.00%), Postives = 86/136 (63.24%), Query Frame = 1
Query:    1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408
            PY +VEARAL ADC+LLIV+ L D ++ E++  A    LDVLVEVHD +ELERALK  +  L+GVNNRNL TF+V L  T            +ITESGI    DV +M+   ++SFLVGE+FM+   P      LF
Sbjct:  127 PYNVVEARALHADCILLIVACLSDQQLEEMSKTAFEHQLDVLVEVHDEEELERALKLSEQCLLGVNNRNLKTFDVDLNTTIRLKKLLPASRLLITESGIATPDDVRMMQEHDIHSFLVGESFMKQPRPDQAFTALF 262          
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_ACIB5 (Indole-3-glycerol phosphate synthase OS=Acinetobacter baumannii (strain AB0057) GN=trpC PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.612e-28
Identity = 68/136 (50.00%), Postives = 86/136 (63.24%), Query Frame = 1
Query:    1 PYQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLF 408
            PY +VEARAL ADC+LLIV+ L D ++ E++  A    LDVLVEVHD +ELERALK  +  L+GVNNRNL TF+V L  T            +ITESGI    DV +M+   ++SFLVGE+FM+   P      LF
Sbjct:  127 PYNVVEARALHADCILLIVACLSDQQLEEMSKTAFEHQLDVLVEVHDEEELERALKLSEQCLLGVNNRNLKTFDVDLNTTIRLKKLLPASRLLITESGIATPDDVRMMQEHDIHSFLVGESFMKQPRPDQAFTALF 262          
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_LEGPL (Indole-3-glycerol phosphate synthase OS=Legionella pneumophila (strain Lens) GN=trpC PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.126e-28
Identity = 63/134 (47.01%), Postives = 91/134 (67.91%), Query Frame = 1
Query:    4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRL 405
            YQI E+  LGADC+LLIV+ LDDV++ +   +A+ + + VLVE H  DELERAL+ L TPL+G+NNR+LH F+  ++ +            +ITESGI  R D++LM+   + +FL+GE+ MRA+N G  LQ+L
Sbjct:  123 YQIYESLVLGADCILLIVALLDDVQLMDFCQLAQELKMSVLVESHTQDELERALR-LPTPLIGINNRSLHNFKTDIQLSIQLKQFVPKDKIIITESGINTREDIKLMQSHDINAFLIGESLMRADNIGKALQKL 255          
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_RHIL3 (Indole-3-glycerol phosphate synthase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=trpC PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.040e-27
Identity = 66/142 (46.48%), Postives = 92/142 (64.79%), Query Frame = 1
Query:    4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLFFPERGVA 429
            YQ+ EARA GADC+LLI+++L D +   L   A ++G+DVLVEVHD +E+ERALK L +PL+G+NNRNL TFEVSL  +            ++ ESGI   AD + ++   + +FLVGE+ MR E+  A  + L F E  +A
Sbjct:  128 YQVHEARAWGADCILLIMASLSDDEAERLQDEAFALGMDVLVEVHDAEEMERALK-LSSPLIGINNRNLRTFEVSLTVSEALAPMVSADRLLVGESGIFTHADCKRLQAVDINTFLVGESLMRKEDVAAATRALLFGEAAIA 268          
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_RHILW (Indole-3-glycerol phosphate synthase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=trpC PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.186e-27
Identity = 67/142 (47.18%), Postives = 92/142 (64.79%), Query Frame = 1
Query:    4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLFFPERGVA 429
            YQ+ EARA GADC+LLI+++L D +   L   A S+G+DVLVEVHD +E+ERALK L +PL+G+NNRNL TFEVSL  +            +I ESGI   AD + ++   + +FLVGE+ MR ++  A  + L F E  +A
Sbjct:  128 YQVHEARAWGADCILLIMASLTDDEAERLQDEAFSLGMDVLVEVHDAEEMERALK-LSSPLIGINNRNLRTFEVSLTVSETLASMVPADRLLIGESGIFTHADCKRLQAVDISTFLVGESLMRKDDVTAATRALLFGEAAIA 268          
BLAST of EY684638 vs. ExPASy Swiss-Prot
Match: TRPC_RHIE6 (Indole-3-glycerol phosphate synthase OS=Rhizobium etli (strain CIAT 652) GN=trpC PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.509e-26
Identity = 65/142 (45.77%), Postives = 92/142 (64.79%), Query Frame = 1
Query:    4 YQIVEARALGADCVLLIVSALDDVKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPLVGVNNRNLHTFEVSLENTXXXXXXXXXXXXVITESGIVNRADVELMEISGVYSFLVGETFMRAENPGAELQRLFFPERGVA 429
            YQ+ EARA GADC+LLI+++L D +   L   + S+G+DVLVEVHD  E+ERALK L +PL+G+NNRNL TFEVSL  +            ++ ESGI   AD + ++ +G+ +FLVGE+ MR ++  A  + L   E  +A
Sbjct:  128 YQVHEARAWGADCILLIMASLTDDEAKRLQDESFSLGMDVLVEVHDAPEMERALK-LSSPLIGINNRNLRTFEVSLTVSETLASMVPDDRLLVGESGIFTHADCKRLQAAGINTFLVGESLMRKDDVTAATRALLVGEAAIA 268          
The following BLAST results are available for this feature:
BLAST of EY684638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 383
Match NameE-valueIdentityDescription
TRPC_ACIAD9.451e-2949.26Indole-3-glycerol phosphate synthase OS=Acinetobac... [more]
TRPC_ACIBY1.612e-2850.00Indole-3-glycerol phosphate synthase OS=Acinetobac... [more]
TRPC_ACIBT1.612e-2850.00Indole-3-glycerol phosphate synthase OS=Acinetobac... [more]
TRPC_ACIBS1.612e-2850.00Indole-3-glycerol phosphate synthase OS=Acinetobac... [more]
TRPC_ACIBC1.612e-2850.00Indole-3-glycerol phosphate synthase OS=Acinetobac... [more]
TRPC_ACIB51.612e-2850.00Indole-3-glycerol phosphate synthase OS=Acinetobac... [more]
TRPC_LEGPL6.126e-2847.01Indole-3-glycerol phosphate synthase OS=Legionella... [more]
TRPC_RHIL33.040e-2746.48Indole-3-glycerol phosphate synthase OS=Rhizobium ... [more]
TRPC_RHILW5.186e-2747.18Indole-3-glycerol phosphate synthase OS=Rhizobium ... [more]
TRPC_RHIE61.509e-2645.77Indole-3-glycerol phosphate synthase OS=Rhizobium ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-E11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684638 ID=EY684638; Name=EY684638; organism=Citrus sinensis; type=EST; length=851bp
CCCTACCAGATCGTCGAAGCTCGTGCCTTGGGCGCCGATTGCGTGCTGTT
GATCGTCTCCGCACTGGATGACGTGAAGATGGCCGAACTGGCGGCCGTGG
CCAAAAGCGTCGGCCTCGACGTGCTGGTGGAAGTGCACGACGGTGATGAA
CTGGAACGCGCGTTGAAAACCCTCGACACACCGTTGGTGGGCGTCAACAA
CCGCAACCTGCACACGTTTGAAGTCAGCCTGGAAAACACCCTCGACCTGT
TGCCGCGTATCCCGCGTGACCGGTTGGTGATTACCGAAAGTGGCATCGTC
AATCGCGCCGATGTCGAACTGATGGAAATCAGCGGCGTGTACTCGTTCCT
CGTCGGCGAAACCTTCATGCGTGCCGAGAACCCGGGGGCTGAATTGCAGC
GCCTGTTCTTCCCGGAGCGTGGCGTTGCTGTCAGCGGTTCGACCCTGGAT
TGATGATGACCCAGCCGGTGGCGATGACGGTCGAGGCAGGCCTTAAGGCC
GAGCAGGATTTGCTCGCCGCTGTCTGCGCGGGGGAGCAGCCGTTCGGCCT
GCTGTTCTGGCAGCCCAGCGATCCAACGTTGGTGATGCCTCCGCGTTTGA
GCCGACTTCCGGCATTCGAGACGCGCAGTCAGGTATCCGGCACGAGGCCG
GTTGCCCGGGGCTGCGTGCGGGAAGACGGCGGTGGACTGGGACCGGCACG
AAGAGGCGACGGACGAACCGTCCCTGGCGGGAGCGCAAGCAGCGGGGAGG
GCGTGAGCGAGGGGGGTCGCGAGCGGAGAGGGAGGGTTGTAAACGTGCAT
CCGGCGGCCCGCAACCCAACGGGGGAGCCGCCCCACCGGCCGCATGGGGG
G
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