EY684637

Overview
NameEY684637
Unique NameEY684637
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_HELVI (60S ribosomal protein L31 OS=Heliothis virescens GN=RpL31 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.564e-29
Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = 1 
Query:  100 REKMVEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIE 459
            + K   K K    EVVTRE+T+NLHKRLHG  FKK+AP+AIKEIRKFAEK MGT DVRVD +LNK +WS+G+R+VP           NDDED+  +L++LVT   +P   ++GL T+ ++
Sbjct:    3 KPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKFLWSKGVRNVPFRVRVRLSRRRNDDEDSAHKLFTLVTY--VPVASIKGLQTENVD 120
[Close]
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_PAROL (60S ribosomal protein L31 OS=Paralichthys olivaceus GN=rpl31 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.747e-28
Identity = 64/121 (52.89%), Postives = 84/121 (69.42%), Query Frame = 1 
Query:  106 KMVEKTKGRK--EEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIED 462
            K  EK KGR    EVVTRE+TIN+HKR+HG  FKK+AP+AIKEIRKFA K MGT DVR+D +LNK +WS+G+R+VP           N+DED+  +LY+LVT   +P    +GL T  +++
Sbjct:    5 KKGEKKKGRSAINEVVTREYTINVHKRIHGVGFKKRAPRAIKEIRKFAVKEMGTPDVRIDTRLNKAVWSKGVRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTCKGLQTVNVDE 123
[Close]
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_ICTPU (60S ribosomal protein L31 OS=Ictalurus punctatus GN=rpl31 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.199e-28
Identity = 62/118 (52.54%), Postives = 84/118 (71.19%), Query Frame = 1 
Query:  115 EKTKGRK--EEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIED 462
            EK KGR    EVVTRE+TIN+HKR+HG +FKK+AP+AIKEIRKFA K MGT DVR+D +LNK +W++G+R+VP           N+DED+  +LY+LVT   +P    +GL T  +++
Sbjct:    9 EKKKGRSAINEVVTREYTINVHKRIHGISFKKRAPRAIKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGVRNVPYRMRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTYKGLQTVNVDE 124
[Close]
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_RAT (60S ribosomal protein L31 OS=Rattus norvegicus GN=Rpl31 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.248e-27
Identity = 61/118 (51.69%), Postives = 82/118 (69.49%), Query Frame = 1 
Query:  115 EKTKGRK--EEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIED 462
            EK KGR    EVVTRE+TIN+HKR+HG  FKK+AP+A+KEIRKFA K MGT DVR+D +LNK +W++GIR+VP           N+DED+  +LY+LVT   +P    + L T  +++
Sbjct:    9 EKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124
[Close]
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_PIG (60S ribosomal protein L31 OS=Sus scrofa GN=RPL31 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.248e-27
Identity = 61/118 (51.69%), Postives = 82/118 (69.49%), Query Frame = 1 
Query:  115 EKTKGRK--EEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIED 462
            EK KGR    EVVTRE+TIN+HKR+HG  FKK+AP+A+KEIRKFA K MGT DVR+D +LNK +W++GIR+VP           N+DED+  +LY+LVT   +P    + L T  +++
Sbjct:    9 EKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124
[Close]
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_MOUSE (60S ribosomal protein L31 OS=Mus musculus GN=Rpl31 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.248e-27
Identity = 61/118 (51.69%), Postives = 82/118 (69.49%), Query Frame = 1 
Query:  115 EKTKGRK--EEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIED 462
            EK KGR    EVVTRE+TIN+HKR+HG  FKK+AP+A+KEIRKFA K MGT DVR+D +LNK +W++GIR+VP           N+DED+  +LY+LVT   +P    + L T  +++
Sbjct:    9 EKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124
[Close]
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_MARMO (60S ribosomal protein L31 OS=Marmota monax GN=RPL31 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.248e-27
Identity = 61/118 (51.69%), Postives = 82/118 (69.49%), Query Frame = 1 
Query:  115 EKTKGRK--EEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIED 462
            EK KGR    EVVTRE+TIN+HKR+HG  FKK+AP+A+KEIRKFA K MGT DVR+D +LNK +W++GIR+VP           N+DED+  +LY+LVT   +P    + L T  +++
Sbjct:    9 EKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124
[Close]
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_HUMAN (60S ribosomal protein L31 OS=Homo sapiens GN=RPL31 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.248e-27
Identity = 61/118 (51.69%), Postives = 82/118 (69.49%), Query Frame = 1 
Query:  115 EKTKGRK--EEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIED 462
            EK KGR    EVVTRE+TIN+HKR+HG  FKK+AP+A+KEIRKFA K MGT DVR+D +LNK +W++GIR+VP           N+DED+  +LY+LVT   +P    + L T  +++
Sbjct:    9 EKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124
[Close]
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_BOVIN (60S ribosomal protein L31 OS=Bos taurus GN=RPL31 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.248e-27
Identity = 61/118 (51.69%), Postives = 82/118 (69.49%), Query Frame = 1 
Query:  115 EKTKGRK--EEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIED 462
            EK KGR    EVVTRE+TIN+HKR+HG  FKK+AP+A+KEIRKFA K MGT DVR+D +LNK +W++GIR+VP           N+DED+  +LY+LVT   +P    + L T  +++
Sbjct:    9 EKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124
[Close]
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_XENLA (60S ribosomal protein L31 OS=Xenopus laevis GN=rpl31 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.854e-27
Identity = 61/118 (51.69%), Postives = 82/118 (69.49%), Query Frame = 1 
Query:  115 EKTKGRK--EEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIED 462
            EK KGR    EVVTRE+TIN+HKR+HG  FKK+AP+A+KEIRKFA K M T DVR+D +LNK +W++GIR+VP           N+DED+  +LY+LVT   +P    +GL T  +++
Sbjct:    9 EKKKGRSAINEVVTREYTINIHKRIHGIGFKKRAPRALKEIRKFAVKEMRTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTNYKGLQTVNVDE 124
The following BLAST results are available for this feature:
BLAST of EY684637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RL31_HELVI9.564e-2953.3360S ribosomal protein L31 OS=Heliothis virescens G... [more]
RL31_PAROL4.747e-2852.8960S ribosomal protein L31 OS=Paralichthys olivaceu... [more]
RL31_ICTPU6.199e-2852.5460S ribosomal protein L31 OS=Ictalurus punctatus G... [more]
RL31_RAT5.248e-2751.6960S ribosomal protein L31 OS=Rattus norvegicus GN=... [more]
RL31_PIG5.248e-2751.6960S ribosomal protein L31 OS=Sus scrofa GN=RPL31 P... [more]
RL31_MOUSE5.248e-2751.6960S ribosomal protein L31 OS=Mus musculus GN=Rpl31... [more]
RL31_MARMO5.248e-2751.6960S ribosomal protein L31 OS=Marmota monax GN=RPL3... [more]
RL31_HUMAN5.248e-2751.6960S ribosomal protein L31 OS=Homo sapiens GN=RPL31... [more]
RL31_BOVIN5.248e-2751.6960S ribosomal protein L31 OS=Bos taurus GN=RPL31 P... [more]
RL31_XENLA6.854e-2751.6960S ribosomal protein L31 OS=Xenopus laevis GN=rpl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-E10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684637 ID=EY684637; Name=EY684637; organism=Citrus sinensis; type=EST; length=855bp
CCACGCGTCCGCTTTTGAGATCATTTAATTGAACCCCCGTCTCCTCTTTC
ATTCCCCCTCTCGAGTTTCTGCATTCTTTGAAACCCCTAAAGGTGAAAGA
GAGAGAAAATGGTGGAGAAGACCAAGGGACGAAAGGAGGAGGTGGTGACC
AGAGAGTTCACCATCAACCTTCACAAGCGTCTACATGGCTGTACATTCAA
GAAGAAAGCTCCAAAAGCCATTAAGGAGATCAGGAAATTTGCAGAGAAAG
CTATGGGCACTAAGGATGTTAGGGTTGATGTCAAATTGAACAAGCAAATC
TGGAGCAGGGGCATCCGAAGTGTTCCAAAGAGGGTTAGGGTTCGCATTGC
TCGCAGGAGGAACGATGATGAAGACGCTAAGGAAGAGCTGTACTCTCTTG
TAACTGTTGCAGAAATCCCACCAGAAGGACTGAGGGGGCTTGGCACCAAG
GTCATTGAAGATGAGGATTAAATTTAACACTCTGTTCAAAGAAAACCGTT
GGATAGGAAGGATAGGTTTACATGATAGTTTTGGCATGCTATTCAAGTGT
TATGAGAAAGACTAGTGTTTTTTTCCATCTGTTTGAACTTTAATGTGTTG
TTTTGGATGGAGTTGCTTTTTAGATTGTTACCAATGGCTTGTTANAAAAG
TCCAAAGTTACTTTCCAATTGAATTTCCCTTTTAGATAAATGCTATATTT
ATGGGTTCTGAAAAAAGGTAAAGGTCTCCAATTGAATTCCAGGAGAAAGG
AGAGAGCCGAGGCGGGCGGCAGGGGGGCGCGACGAGGGAGAGAGCGGGGG
AAGGGAGGGGGGGGCCGCCTTGGAGGGGACCCCTCTTAGACCGCGGGGGT
GGCAA
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