EY684637

Overview
NameEY684637
Unique NameEY684637
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_PONAB (60S ribosomal protein L31 OS=Pongo abelii GN=RPL31 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.854e-27
Identity = 58/103 (56.31%), Postives = 75/103 (72.82%), Query Frame = 1
Query:  115 EKTKGRK--EEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEI 417
            EK KGR    EVVTRE+TIN+HKR+HG  FKK+AP+A+KEIRKFA K MGT DVR+D +LNK +W++GIR+VP           N+DED+  +LY+LVT   +
Sbjct:    9 EKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPV 111          
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_DROME (60S ribosomal protein L31 OS=Drosophila melanogaster GN=RpL31 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.802e-26
Identity = 64/123 (52.03%), Postives = 79/123 (64.23%), Query Frame = 1
Query:  118 KTKGRK------EEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIEDED 468
            KTKG K       EVVTRE TI+L KR+H   FKK+AP+AIKEIRKFAE+ MGT DVR+D +LNK IWS+GIRS P           NDDED+  +LY+ VT   +P    + L T+ +E  D
Sbjct:    3 KTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTY--VPVSTFKNLQTENVESSD 123          
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_DICDI (60S ribosomal protein L31 OS=Dictyostelium discoideum GN=rpl31 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.880e-25
Identity = 55/108 (50.93%), Postives = 79/108 (73.15%), Query Frame = 1
Query:  139 EVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIED 462
            E VTRE+TINLHKRL+G TFK +APKA+K+++ FA+K MGTKDVR+D KLNK +WS+GI++VP           N+DE+A E+LY++ ++  +  +  +GL TK + D
Sbjct:    5 EAVTREYTINLHKRLYGTTFKDRAPKAVKQVKLFAQKIMGTKDVRIDNKLNKFLWSQGIKNVPHRVRVTLSRKRNEDENATEKLYTVASLVIV--KSFKGLQTKKVAD 110          
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_DROVI (60S ribosomal protein L31 OS=Drosophila virilis GN=RpL31 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.094e-24
Identity = 64/127 (50.39%), Postives = 79/127 (62.20%), Query Frame = 1
Query:  118 KTKGRKE------EVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGI----RSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIEDED 468
            KTKG K       EVVTRE TI+L KR+H   FKK+AP+AIKEIRKF E+ MGT DVR+D +LNK IWS+GI    RS P           NDDED+  +LY+LVT   +P    + L T+ +E  D
Sbjct:    3 KTKGEKRNKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFTEREMGTNDVRIDTRLNKHIWSKGISLRYRSTPFRVRVRLARRRNDDEDSPNKLYTLVTYVPVPT--FKNLQTENVESSD 127          
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_AEDAE (60S ribosomal protein L31 OS=Aedes aegypti GN=RpL31 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.438e-24
Identity = 58/123 (47.15%), Postives = 79/123 (64.23%), Query Frame = 1
Query:  100 REKMVEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIEDED 468
            + K  +K K    EVVTRE TINL++RLH   +KK+AP+A+K +RKFAEK MGT DVR+D +LNK +W RGIR+ P           NDDED+  +LY+LVT   +P    + L T+ +E  +
Sbjct:    3 KTKTEKKAKSAINEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVRIDTRLNKALWHRGIRNPPFRIRVRLSRRRNDDEDSPNKLYTLVTY--VPVSTFKELQTENVESTE 123          
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_ASHGO (60S ribosomal protein L31 OS=Ashbya gossypii GN=RPL31 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.264e-24
Identity = 54/111 (48.65%), Postives = 77/111 (69.37%), Query Frame = 1
Query:  136 EEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIEDED 468
            ++VVTRE+TINLHKRLHG TFKK+AP+A+KEI+KFA+  MGT+DVR+D +LN +IW RG++ VP           N+++ A   L+S V    +     +GL T V+E+E+
Sbjct:    5 KDVVTREYTINLHKRLHGVTFKKRAPRAVKEIKKFAKLHMGTEDVRLDPRLNTEIWKRGVKGVPFRMRLRISRRRNEEDTAPPPLFSYVEPVVV--ASAKGLHTVVVEEEE 113          
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31B_YEAST (60S ribosomal protein L31-B OS=Saccharomyces cerevisiae GN=RPL31B PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.338e-22
Identity = 53/110 (48.18%), Postives = 76/110 (69.09%), Query Frame = 1
Query:  136 EEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIEDE 465
            ++VVTRE+TINLHKRLHG +FKK+AP+A+KEI+KFA+  MGT+DVR+  +LN+ IW RG++ V            N++EDAK  L+S V    +     +GL T V+E++
Sbjct:    5 KDVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMGTEDVRLAPELNQAIWKRGVKGVEYRLRLRISRKRNEEEDAKNPLFSYVEPVLV--ASAKGLQTVVVEED 112          
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_CANGA (60S ribosomal protein L31 OS=Candida glabrata GN=RPL31 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.747e-22
Identity = 52/110 (47.27%), Postives = 77/110 (70.00%), Query Frame = 1
Query:  136 EEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIEDE 465
            ++VVTRE+TIN+HKRLHG +FKK+APKA+KEI+KFA+  MGT+DVR+  +LN++IW RG++ V            N++E+AK  L+S V    +     +GL T V+E++
Sbjct:    5 KDVVTREYTINMHKRLHGVSFKKRAPKAVKEIKKFAKLHMGTEDVRLAPELNQEIWKRGVKGVAFRLRLRISRKRNEEENAKNPLFSYVEPVFV--ASAKGLQTTVVEED 112          
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31A_YEAST (60S ribosomal protein L31-A OS=Saccharomyces cerevisiae GN=RPL31A PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.282e-22
Identity = 53/110 (48.18%), Postives = 75/110 (68.18%), Query Frame = 1
Query:  136 EEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIEDE 465
            ++VVTRE+TINLHKRLHG +FKK+AP+A+KEI+KFA+  MGT DVR+  +LN+ IW RG++ V            N++EDAK  L+S V    +     +GL T V+E++
Sbjct:    5 KDVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMGTDDVRLAPELNQAIWKRGVKGVEYRLRLRISRKRNEEEDAKNPLFSYVEPVLV--ASAKGLQTVVVEED 112          
BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_CAEEL (60S ribosomal protein L31 OS=Caenorhabditis elegans GN=rpl-31 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.479e-21
Identity = 54/121 (44.63%), Postives = 77/121 (63.64%), Query Frame = 1
Query:  106 KMVEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKVIEDED 468
            K  +K++    EVVTRE+TI++H R+ G   KK+AP+AI EI+KFA+  M T DVRVD KLNK IWS+GI++VP           N+DED+ ++LY+L T   +P     GL    ++ E+
Sbjct:    4 KNEKKSRSTINEVVTREYTIHIHARIRGIGSKKRAPRAIDEIKKFAKIQMKTNDVRVDTKLNKFIWSKGIKNVPYRVRVRLSRRRNEDEDSAQKLYTLCTY--VPCTNFHGLTNVNVDSEE 122          
The following BLAST results are available for this feature:
BLAST of EY684637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RL31_PONAB6.854e-2756.3160S ribosomal protein L31 OS=Pongo abelii GN=RPL31... [more]
RL31_DROME5.802e-2652.0360S ribosomal protein L31 OS=Drosophila melanogast... [more]
RL31_DICDI2.880e-2550.9360S ribosomal protein L31 OS=Dictyostelium discoid... [more]
RL31_DROVI1.094e-2450.3960S ribosomal protein L31 OS=Drosophila virilis GN... [more]
RL31_AEDAE2.438e-2447.1560S ribosomal protein L31 OS=Aedes aegypti GN=RpL3... [more]
RL31_ASHGO9.264e-2448.6560S ribosomal protein L31 OS=Ashbya gossypii GN=RP... [more]
RL31B_YEAST1.338e-2248.1860S ribosomal protein L31-B OS=Saccharomyces cerev... [more]
RL31_CANGA1.747e-2247.2760S ribosomal protein L31 OS=Candida glabrata GN=R... [more]
RL31A_YEAST2.282e-2248.1860S ribosomal protein L31-A OS=Saccharomyces cerev... [more]
RL31_CAEEL1.479e-2144.6360S ribosomal protein L31 OS=Caenorhabditis elegan... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-E10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684637 ID=EY684637; Name=EY684637; organism=Citrus sinensis; type=EST; length=855bp
CCACGCGTCCGCTTTTGAGATCATTTAATTGAACCCCCGTCTCCTCTTTC
ATTCCCCCTCTCGAGTTTCTGCATTCTTTGAAACCCCTAAAGGTGAAAGA
GAGAGAAAATGGTGGAGAAGACCAAGGGACGAAAGGAGGAGGTGGTGACC
AGAGAGTTCACCATCAACCTTCACAAGCGTCTACATGGCTGTACATTCAA
GAAGAAAGCTCCAAAAGCCATTAAGGAGATCAGGAAATTTGCAGAGAAAG
CTATGGGCACTAAGGATGTTAGGGTTGATGTCAAATTGAACAAGCAAATC
TGGAGCAGGGGCATCCGAAGTGTTCCAAAGAGGGTTAGGGTTCGCATTGC
TCGCAGGAGGAACGATGATGAAGACGCTAAGGAAGAGCTGTACTCTCTTG
TAACTGTTGCAGAAATCCCACCAGAAGGACTGAGGGGGCTTGGCACCAAG
GTCATTGAAGATGAGGATTAAATTTAACACTCTGTTCAAAGAAAACCGTT
GGATAGGAAGGATAGGTTTACATGATAGTTTTGGCATGCTATTCAAGTGT
TATGAGAAAGACTAGTGTTTTTTTCCATCTGTTTGAACTTTAATGTGTTG
TTTTGGATGGAGTTGCTTTTTAGATTGTTACCAATGGCTTGTTANAAAAG
TCCAAAGTTACTTTCCAATTGAATTTCCCTTTTAGATAAATGCTATATTT
ATGGGTTCTGAAAAAAGGTAAAGGTCTCCAATTGAATTCCAGGAGAAAGG
AGAGAGCCGAGGCGGGCGGCAGGGGGGCGCGACGAGGGAGAGAGCGGGGG
AAGGGAGGGGGGGGCCGCCTTGGAGGGGACCCCTCTTAGACCGCGGGGGT
GGCAA
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