EY684637

Overview
NameEY684637
Unique NameEY684637
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684637 vs. ExPASy Swiss-Prot
Match: RL31_SCHPO (60S ribosomal protein L31 OS=Schizosaccharomyces pombe GN=rpl31 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.116e-20
Identity = 48/103 (46.60%), Postives = 69/103 (66.99%), Query Frame = 1 
Query:  109 MVEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEI 417
            M    K    +VVTR++TI++HKRL+G +FKK+AP+AIKEI  FA+K M TK+VRVD  LNK++W RGIR+VP           +D++D  + LY+ V   ++
Sbjct:    1 MANTKKSAINQVVTRDYTIHMHKRLYGVSFKKRAPRAIKEIVAFAQKHMQTKEVRVDPSLNKEVWKRGIRNVPHRLRLRLSRKRSDEDD--KALYTYVQAVDV 101
The following BLAST results are available for this feature:
BLAST of EY684637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RL31_SCHPO8.116e-2046.6060S ribosomal protein L31 OS=Schizosaccharomyces p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-E10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684637 ID=EY684637; Name=EY684637; organism=Citrus sinensis; type=EST; length=855bp
CCACGCGTCCGCTTTTGAGATCATTTAATTGAACCCCCGTCTCCTCTTTC
ATTCCCCCTCTCGAGTTTCTGCATTCTTTGAAACCCCTAAAGGTGAAAGA
GAGAGAAAATGGTGGAGAAGACCAAGGGACGAAAGGAGGAGGTGGTGACC
AGAGAGTTCACCATCAACCTTCACAAGCGTCTACATGGCTGTACATTCAA
GAAGAAAGCTCCAAAAGCCATTAAGGAGATCAGGAAATTTGCAGAGAAAG
CTATGGGCACTAAGGATGTTAGGGTTGATGTCAAATTGAACAAGCAAATC
TGGAGCAGGGGCATCCGAAGTGTTCCAAAGAGGGTTAGGGTTCGCATTGC
TCGCAGGAGGAACGATGATGAAGACGCTAAGGAAGAGCTGTACTCTCTTG
TAACTGTTGCAGAAATCCCACCAGAAGGACTGAGGGGGCTTGGCACCAAG
GTCATTGAAGATGAGGATTAAATTTAACACTCTGTTCAAAGAAAACCGTT
GGATAGGAAGGATAGGTTTACATGATAGTTTTGGCATGCTATTCAAGTGT
TATGAGAAAGACTAGTGTTTTTTTCCATCTGTTTGAACTTTAATGTGTTG
TTTTGGATGGAGTTGCTTTTTAGATTGTTACCAATGGCTTGTTANAAAAG
TCCAAAGTTACTTTCCAATTGAATTTCCCTTTTAGATAAATGCTATATTT
ATGGGTTCTGAAAAAAGGTAAAGGTCTCCAATTGAATTCCAGGAGAAAGG
AGAGAGCCGAGGCGGGCGGCAGGGGGGCGCGACGAGGGAGAGAGCGGGGG
AAGGGAGGGGGGGGCCGCCTTGGAGGGGACCCCTCTTAGACCGCGGGGGT
GGCAA
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