EY684625

Overview
NameEY684625
Unique NameEY684625
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684625 vs. ExPASy Swiss-Prot
Match: GRP78_NEUCR (78 kDa glucose-regulated protein homolog OS=Neurospora crassa GN=grp78 PE=3 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11
Identity = 31/80 (38.75%), Postives = 56/80 (70.00%), Query Frame = 1 
Query:   37 KKVEAKNALENYAYNMRNTVKDEK-IGSKLAPADKKKIEDAIDQAIQWLDSN-QLAEADEFEDKMKELESICNPIIAKMY 270
            +++EA+N LENYA++++N V DE  +G K+   DK+ I DA+ +A  WL+ N   A A++F+++ ++L ++  PI +K+Y
Sbjct:  566 ERIEARNGLENYAFSLKNQVNDEDGLGGKIDEEDKETILDAVKEAQDWLEENAATASAEDFDEQKEKLSNVAYPITSKLY 645
The following BLAST results are available for this feature:
BLAST of EY684625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
GRP78_NEUCR4.606e-1138.7578 kDa glucose-regulated protein homolog OS=Neuros... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-D06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684625 ID=EY684625; Name=EY684625; organism=Citrus sinensis; type=EST; length=787bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGAAGAAGGTTGAGGC
AAAGAATGCCTTGGAGAACTATGCATACAACATGAGGAACACAGTGAAGG
ACGAGAAGATTGGTTCCAAGCTTGCACCAGCGGATAAGAAGAAGATTGAA
GATGCGATCGACCAGGCCATCCAATGGTTGGACAGCAACCAGCTTGCAGA
GGCTGATGAGTTTGAGGATAAGATGAAGGAATTAGAGAGCATCTGCAACC
CCATCATTGCAAAGATGTACCAGGGTGCCGGTGGTGACATGGGTGGTGCC
ATGGATGACGATGTTCCTGCTGGTGGTAGCGGTGCTGGCCCCAAGATTGA
GGAGGTAGACTAAGCAGCTCTCGTTTTCTGCTGGCTTTTGTCTGTTGAGG
GTTAAGTTGGTAGGGTGATTANATGTTTCGGAATTTTAATTTTATTTTCG
TGCTTTTGACTATTATTGGGTTTTGGATGATCTTTTACAAGGCGGGGCAG
AAGCGCCGTGGCAGTGTGCTCTATGGTTAGTCCATATACTTTTGCCTCCC
CCAGGGGCGACCTATGTATTGCGCGGAGCGCGGGGACGGCAGAGGGCGGG
GGTGCGGAGGAGGAAGAGGCAGACGCGGGCGGGGGGAGAAGGGGGAGAGG
GGCGACCCGCGCCACGAGGGGGCGACCGGGGCGCGGGAGGGGACGGAGGA
GGGGGGTGCGGCGAGAGGGGGGGGCGACGGACGCTCGCGCGGGACAGGGG
GCCGCGCGGGCGGAAGAGGGCAGGGCCGCGCAAGATA
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