EY684603

Overview
NameEY684603
Unique NameEY684603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684603 vs. ExPASy Swiss-Prot
Match: PLDA1_BRAOC (Phospholipase D alpha 1 OS=Brassica oleracea var. capitata GN=PLD1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.022e-18
Identity = 37/90 (41.11%), Postives = 61/90 (67.78%), Query Frame = 3
Query:   33 GQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 299
            GQI+G+RMSLW EHLG +++ F  P ++EC+ KV  + +  W  ++++  + ++  HL++YPV+VD +G V   PG+E FPD    I+G+
Sbjct:  710 GQIHGFRMSLWYEHLGMLDETFLDPSSVECIEKVNRISDKYWDLYSSESLEHDLPGHLLRYPVDVDGEGDVTEFPGFEFFPDTKARILGT 799          
BLAST of EY684603 vs. ExPASy Swiss-Prot
Match: PLDA2_ORYSJ (Phospholipase D alpha 2 OS=Oryza sativa subsp. japonica GN=PLD2 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 5.155e-18
Identity = 39/90 (43.33%), Postives = 60/90 (66.67%), Query Frame = 3
Query:   33 GQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 299
            GQI+G+RMSLW EHLG + D F  PE+LECV++V  + +  W  +A+D+   ++  HL+ YPV V ++G V  +PG + FPD    ++G+
Sbjct:  718 GQIHGFRMSLWYEHLGMLHDNFLNPESLECVQRVNKMADKYWDLYASDELNDDLPGHLLTYPVRVTKEGTVTELPGAKFFPDTQAPVIGT 807          
BLAST of EY684603 vs. ExPASy Swiss-Prot
Match: PLDA1_PIMBR (Phospholipase D alpha 1 OS=Pimpinella brachycarpa GN=PLD1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.500e-17
Identity = 36/90 (40.00%), Postives = 62/90 (68.89%), Query Frame = 3
Query:   33 GQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 299
            GQI+G+RMSLW EHLG ++D    PE+++CV+KV +V +  W  ++++  ++++  HL++YP+ V  +G V  +PG E FPD    ++G+
Sbjct:  708 GQIHGFRMSLWYEHLGMLDDTLALPESVDCVQKVNTVADKYWDLYSSETLENDLPGHLLRYPIAVASEGNVTELPGTEFFPDTKARVLGA 797          
BLAST of EY684603 vs. ExPASy Swiss-Prot
Match: PLDA1_RICCO (Phospholipase D alpha 1 OS=Ricinus communis GN=PLD1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.559e-17
Identity = 38/90 (42.22%), Postives = 60/90 (66.67%), Query Frame = 3
Query:   33 GQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 299
            GQI+G+RMSLW EHLG +++ F  PE+ ECVRKV  + E  W  ++++  + ++  HL++YP+ V  +G V  +PG E FPD    ++G+
Sbjct:  708 GQIHGFRMSLWYEHLGMLDESFLNPESEECVRKVNQMAEKYWDLYSSETLEHDLPGHLLRYPIGVASEGDVTELPGTEFFPDTKARVLGA 797          
BLAST of EY684603 vs. ExPASy Swiss-Prot
Match: PLDA1_ARATH (Phospholipase D alpha 1 OS=Arabidopsis thaliana GN=PLDALPHA1 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.342e-17
Identity = 35/90 (38.89%), Postives = 60/90 (66.67%), Query Frame = 3
Query:   33 GQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 299
            GQI+G+RMSLW EHLG +++ F  P +LEC+ KV  + +  W  ++++  + ++  HL++YP+ V  +G +  +PG+E FPD    I+G+
Sbjct:  710 GQIHGFRMSLWYEHLGMLDETFLDPSSLECIEKVNRISDKYWDFYSSESLEHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGT 799          
BLAST of EY684603 vs. ExPASy Swiss-Prot
Match: PLDA2_ARATH (Phospholipase D alpha 2 OS=Arabidopsis thaliana GN=PLDALPHA2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.695e-16
Identity = 34/89 (38.20%), Postives = 58/89 (65.17%), Query Frame = 3
Query:   33 GQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVG 296
            GQI+G+RMSLW EHLG +++ F  P + EC++KV  V +  W  ++++  + ++  HL++YP+ +  +G +  +PG E FPD    I+G
Sbjct:  710 GQIHGFRMSLWYEHLGMLDETFLDPSSQECIQKVNRVADKYWDLYSSESLEHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILG 798          
BLAST of EY684603 vs. ExPASy Swiss-Prot
Match: PLDA1_TOBAC (Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PLD1 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 6.302e-16
Identity = 35/90 (38.89%), Postives = 59/90 (65.56%), Query Frame = 3
Query:   33 GQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 299
            GQI+G+RM+LW EHLG +++ F  PE+ ECV KV  + +  W  ++++  + ++  HL++YP+ V  +G V  +PG E FPD    ++G+
Sbjct:  708 GQIHGFRMALWYEHLGMLDETFLHPESEECVSKVNRMADKYWDLYSSESLERDLPGHLLRYPIGVASEGDVTELPGAEHFPDTKARVLGT 797          
BLAST of EY684603 vs. ExPASy Swiss-Prot
Match: PLDZ1_ARATH (Phospholipase D zeta OS=Arabidopsis thaliana GN=PLDZETA PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.716e-13
Identity = 33/93 (35.48%), Postives = 52/93 (55.91%), Query Frame = 3
Query:   27 PYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADD---QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVG 296
            P GQI+ +R+SLW EHL    + F  PE+ EC+R V +  +  W  ++A +     ++  HL+ YP+ +   G+V  + G E FPD    +VG
Sbjct:  716 PVGQIFSFRISLWLEHLRVTTNAFQCPESEECIRMVNATADELWGLYSAQEYPRNDDLPGHLLSYPISIGSNGEVTNLAGTEFFPDTNAKVVG 808          
The following BLAST results are available for this feature:
BLAST of EY684603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
PLDA1_BRAOC3.022e-1841.11Phospholipase D alpha 1 OS=Brassica oleracea var. ... [more]
PLDA2_ORYSJ5.155e-1843.33Phospholipase D alpha 2 OS=Oryza sativa subsp. jap... [more]
PLDA1_PIMBR1.500e-1740.00Phospholipase D alpha 1 OS=Pimpinella brachycarpa ... [more]
PLDA1_RICCO2.559e-1742.22Phospholipase D alpha 1 OS=Ricinus communis GN=PLD... [more]
PLDA1_ARATH3.342e-1738.89Phospholipase D alpha 1 OS=Arabidopsis thaliana GN... [more]
PLDA2_ARATH3.695e-1638.20Phospholipase D alpha 2 OS=Arabidopsis thaliana GN... [more]
PLDA1_TOBAC6.302e-1638.89Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PL... [more]
PLDZ1_ARATH1.716e-1335.48Phospholipase D zeta OS=Arabidopsis thaliana GN=PL... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-B04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684603 ID=EY684603; Name=EY684603; organism=Citrus sinensis; type=EST; length=595bp
CCACGCGTCCGAGAATGAAACGTCATCCTTATGGACAGATCTATGGATAT
AGAATGTCGCTATGGGCAGAACATCTTGGATACATTGAGGACTGCTTCGG
ACAACCCGAGACTCTGGAATGTGTAAGAAAGGTTAGATCAGTAGGCGAGA
ATAACTGGCAGCAGTTTGCTGCAGATGATCAATCTGAAATGAGGAGCCAC
CTTATAAAGTACCCAGTTGAAGTGGATCGAAAAGGCAAGGTGAGGCCAAT
TCCAGGATATGAAACATTCCCAGACGTGGGAGGAAACATAGTTGGCTCAT
TTTTTGCCATTCAGGAGAATCTTACCATTTGAACAGTTACCGGAAGTTAC
AAGGTAAATAGTAAGAGATACATACAAATTTTGACATGTGTCATCAAAAA
CCCATGTTGATGTATAGCTTGTGTCTCCCTATGGGTATTAACATAGTTTG
ATAATCCCCTGATTTTGTAAATAAGTAGATATACAGTTAGAAAATCATGT
GTCTGTTTATTTGATTTTTAACTTTTATTTCCATTTTTGCATCTAATTAA
TGGCCCTTTGGCTTTCAATATTATTGTGGGTATTTGCAAGGAAAA
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