EY684601

Overview
NameEY684601
Unique NameEY684601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684601 vs. ExPASy Swiss-Prot
Match: DNAJ_STAES (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 12228) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.565e-12
Identity = 53/157 (33.76%), Postives = 73/157 (46.50%), Query Frame = 3
Query:  111 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYD-------AGLYDPLEEEDEDFYGFMQEMVSMMNNVKDEGD-----SFEDLQRTFVEMVDGMSFDFNYDPTDAQKARVNTSKGKAAKRGTSR 545
            YY +LG+ K AS  +I+ AY KL+ K+HPD + K  G    A  +F++I EAY VLSDENKR+ YD        G +        DF GF     S       + D       +DLQ T     +   F    + +  +    +T  G  AK GTS+
Sbjct:    6 YYEVLGVNKSASKDEIKKAYRKLSKKYHPDIN-KEEG----ADEKFKEISEAYEVLSDENKRANYDQFGHDGPQGGFGSQGFGGSDFGGFEDIFSSFFGGGSRQRDPNAPRKGDDLQYTMTITFEEAVFGTKKEISIKKDVTCHTCNGDGAKPGTSK 157          
BLAST of EY684601 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLCV (Chaperone protein dnaJ OS=Chlamydophila caviae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.565e-12
Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  111 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYD 308
            YY +LG+ K AS  +I+ +Y KLA+K+HPD   KNPG A EA++RF+++ EAY VLSD  KR  YD
Sbjct:    3 YYDVLGVSKTASPEEIKKSYRKLAVKYHPD---KNPGDA-EAEKRFKEVSEAYEVLSDPQKRESYD 64          
BLAST of EY684601 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLAB (Chaperone protein dnaJ OS=Chlamydophila abortus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.565e-12
Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  111 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYD 308
            YY +LG+ K AS  +I+ +Y KLA+K+HPD   KNPG A EA++RF+++ EAY VLSD  KR  YD
Sbjct:    3 YYDVLGVSKTASPEEIKKSYRKLAVKYHPD---KNPGDA-EAEKRFKEVSEAYEVLSDPQKRESYD 64          
BLAST of EY684601 vs. ExPASy Swiss-Prot
Match: DJC21_HUMAN (DnaJ homolog subfamily C member 21 OS=Homo sapiens GN=DNAJC21 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.565e-12
Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = 3
Query:  111 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYD-------AGLYDPLEEEDEDFYGFMQEMVSMMNNVKDEGDSFEDLQRTFVEMV 446
            +Y  LG+R+DAS  +++ AY KLA+KWHPD++  N   A EA  +F+ IQ AY VLSD  +R+ YD        G +D  E +D+         V+  +   D+   F  + R   EM+
Sbjct:    4 HYEALGVRRDASEEELKKAYRKLALKWHPDKNLDN---AAEAAEQFKLIQAAYDVLSDPQERAWYDNHREALLKGGFDG-EYQDDSLDLLRYFTVTCYSGYGDDEKGFYTVYRNVFEMI 118          
BLAST of EY684601 vs. ExPASy Swiss-Prot
Match: DNJA3_MOUSE (DnaJ homolog subfamily A member 3, mitochondrial OS=Mus musculus GN=Dnaja3 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.656e-12
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  111 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYDA 311
            YY ILG+ ++AS  DI+ AY++LA K+HPD +  +P    +AK +F Q+ EAY VLSDE KR  YDA
Sbjct:   94 YYQILGVPRNASQKDIKKAYYQLAKKYHPDTNKDDP----KAKEKFSQLAEAYEVLSDEVKRKQYDA 156          
BLAST of EY684601 vs. ExPASy Swiss-Prot
Match: DNAJ_DICNV (Chaperone protein dnaJ OS=Dichelobacter nodosus (strain VCS1703A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.656e-12
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 3
Query:  114 YAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYDAGLYD 323
            YAILG+ + A+  +I+ AY KL+MKWHPDR   NP    EA+ +F++I +AY +LSD  KR+ YD   +D
Sbjct:    7 YAILGVCRTANQDEIKKAYRKLSMKWHPDR---NPNNKEEAEEKFKEINKAYEILSDSQKRASYDRFGFD 73          
BLAST of EY684601 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPE (Chaperone protein dnaJ OS=Bordetella pertussis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.656e-12
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  111 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYD 308
            YY +LG+ K+AS  D++ AY KLAMK+HPDR   NP  + EA+ +F++ +EAY VL DE KR+ YD
Sbjct:    6 YYEVLGVAKNASDEDLKKAYRKLAMKYHPDR---NPD-SKEAEEKFKEAKEAYEVLGDEQKRAAYD 67          
BLAST of EY684601 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPA (Chaperone protein dnaJ OS=Bordetella parapertussis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.656e-12
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  111 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYD 308
            YY +LG+ K+AS  D++ AY KLAMK+HPDR   NP  + EA+ +F++ +EAY VL DE KR+ YD
Sbjct:    6 YYEVLGVAKNASDEDLKKAYRKLAMKYHPDR---NPD-SKEAEEKFKEAKEAYEVLGDEQKRAAYD 67          
BLAST of EY684601 vs. ExPASy Swiss-Prot
Match: DNAJ_BORBR (Chaperone protein dnaJ OS=Bordetella bronchiseptica GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.656e-12
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  111 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYD 308
            YY +LG+ K+AS  D++ AY KLAMK+HPDR   NP  + EA+ +F++ +EAY VL DE KR+ YD
Sbjct:    6 YYEVLGVAKNASDEDLKKAYRKLAMKYHPDR---NPD-SKEAEEKFKEAKEAYEVLGDEQKRAAYD 67          
BLAST of EY684601 vs. ExPASy Swiss-Prot
Match: DNAJ_MAGSA (Chaperone protein dnaJ OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.081e-12
Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  111 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKRRFQQIQEAYSVLSDENKRSMYD 308
            YY +LG+ K AS  DI+ AY K AM++HPDR   NPG A +A+++F++I EAY VL DE KR+ YD
Sbjct:    6 YYELLGVEKGASPDDIKKAYRKQAMQFHPDR---NPGNA-DAEQKFKEINEAYDVLKDEQKRAAYD 67          
The following BLAST results are available for this feature:
BLAST of EY684601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
DNAJ_STAES3.565e-1233.76Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]
DNAJ_CHLCV3.565e-1254.55Chaperone protein dnaJ OS=Chlamydophila caviae GN=... [more]
DNAJ_CHLAB3.565e-1254.55Chaperone protein dnaJ OS=Chlamydophila abortus GN... [more]
DJC21_HUMAN3.565e-1236.13DnaJ homolog subfamily C member 21 OS=Homo sapiens... [more]
DNJA3_MOUSE4.656e-1252.24DnaJ homolog subfamily A member 3, mitochondrial O... [more]
DNAJ_DICNV4.656e-1248.57Chaperone protein dnaJ OS=Dichelobacter nodosus (s... [more]
DNAJ_BORPE4.656e-1253.03Chaperone protein dnaJ OS=Bordetella pertussis GN=... [more]
DNAJ_BORPA4.656e-1253.03Chaperone protein dnaJ OS=Bordetella parapertussis... [more]
DNAJ_BORBR4.656e-1253.03Chaperone protein dnaJ OS=Bordetella bronchiseptic... [more]
DNAJ_MAGSA6.081e-1254.55Chaperone protein dnaJ OS=Magnetospirillum magneti... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-B02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684601 ID=EY684601; Name=EY684601; organism=Citrus sinensis; type=EST; length=846bp
CCACGCGTCCGATGATTTTATCTTGACAGCATATTACATCCTTATTGCTG
TTTTCTTTTTTGGTTGCTGTGATGGATGGAGGAGGAGGATCCAACGGCGG
ATCTTTGAGCTACTACGCGATTCTTGGGATTCGCAAGGACGCCTCCTTCT
CTGACATTCGCTCCGCTTATCACAAGCTCGCCATGAAATGGCATCCGGAT
AGGAGTGCGAAGAACCCGGGAGTGGCCGGGGAAGCCAAACGCCGGTTTCA
GCAAATTCAAGAAGCTTACTCCGTCCTCTCGGATGAGAACAAGAGGTCAA
TGTACGATGCTGGACTTTATGATCCCCTTGAGGAAGAAGATGAGGACTTC
TATGGTTTTATGCAAGAGATGGTCTCCATGATGAATAATGTTAAAGACGA
GGGGGACAGTTTTGAGGACCTCCAAAGGACGTTCGTGGAAATGGTGGATG
GGATGAGCTTCGACTTTAATTATGATCCTACGGATGCGCAAAAAGCACGT
GTCAACACATCAAAGGGTAAAGCGGCCAAGCGCGGTACTTCTCGTTGCTG
ACAATCGCTCTGGATCATCTCTGATCATTCCAGCTAATGATGATGGTGTT
TTATCATTCCCCCCATTTTGGTCTAATCTTCGAATTAATCCCCCTTGTGG
GGGTGGGGAAACTTCAGAAAATTTTTGTTTTGTTTCGCATCCCGGGGGAG
GTCACAGTTGGGGCCGGGGTCGTTTTCTTGATGAATAAGGGCCCCGTTTG
GGGGAATGGGGGGGCGGGGCACGGCGACGTGGGGGCGCGCGGGGGGGGGG
CGCTCCAGGAGGACCCAAGCTTAGGACGGGCCCGCCGGGGCCGGGC
back to top