EY684582

Overview
NameEY684582
Unique NameEY684582
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1017
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684582 vs. ExPASy Swiss-Prot
Match: FENR2_PEA (Ferredoxin--NADP reductase, root isozyme, chloroplastic OS=Pisum sativum PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.971e-26
Identity = 72/165 (43.64%), Postives = 91/165 (55.15%), Query Frame = 3
Query:  327 TEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVD--KNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVY----TNENGEIVKGVCSNFLCDLKPLG*SENTRPVGKEWLLQRDPGGSRHAL 803
            T +P ++E  S+       +N  KPK PY    +   ++ G  APGET H+V + +G VPY EGQS GVI  G +  K G PH +RLYSIAS+  GD  D KT SLCV+R VY    T +      GVCSNFLCD KP    +   P GK  LL  D   + H +
Sbjct:   72 TVSPLELENPSEPP-----LNLHKPKEPYTATIVSVERLVGPKAPGETCHIVINHDGNVPYWEGQSYGVIPPGENPKKPGSPHNVRLYSIASTRYGDNFDGKTASLCVRRAVYYDPVTGKEDPSKNGVCSNFLCDSKPGDKIKIAGPSGKIMLLPEDDPNATHIM 231          
BLAST of EY684582 vs. ExPASy Swiss-Prot
Match: FENR2_ORYSJ (Ferredoxin--NADP reductase, root isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0784700 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.574e-26
Identity = 79/208 (37.98%), Postives = 106/208 (50.96%), Query Frame = 3
Query:  297 RVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVD--KNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVY----TNENGEIVKGVCSNFLCDLKPLG*SENTRPVGKEWLL-QRDPGGS-------------RHALRRELQSYIPR-EFGGKTYV 857
            +V+ +  Q  +E+   V+    +      +N +KPK PY    +   +I G  APGET H+V    G VPY EGQS G+I  G +  K G PH +RLYSIAS+  GD  D +T SLCV+R VY    T +      GVCSNFLC+ KP    + T P GK  LL + DP  +             R  LRR     +P+  FGG  ++
Sbjct:   58 KVLCMSVQQASESKVAVKPLDLESANEPPLNTYKPKEPYTATIVSVERIVGPKAPGETCHIVIDHGGNVPYWEGQSYGIIPPGENPKKPGAPHNVRLYSIASTRYGDSFDGRTTSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKPGDKVKVTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPKYRFGGLAWL 265          
BLAST of EY684582 vs. ExPASy Swiss-Prot
Match: FENR_CHLRE (Ferredoxin--NADP reductase, chloroplastic OS=Chlamydomonas reinhardtii GN=PETH PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.340e-25
Identity = 70/168 (41.67%), Postives = 89/168 (52.98%), Query Frame = 3
Query:  300 VVSVRAQVTTEAPAKVEKESKKMEEGVI-VNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKL---RLYSIASSALGDFGDSKTVSLCVKRLVY----TNENGEIVKGVCSNFLCDLKPLG*SENTRPVGKEWLLQRD 779
            V + +A               K+EEG + +N +  K P+  +     KITG  A GET H++  TEG++P+ EGQS GVI  G   N K  ++   RLYSIASS  GD GD +T SLCV+R VY    T +     KG+CSNFLCD  P      T P GK  LL  D
Sbjct:   34 VAATKASTAVTTDMSKRTVPTKLEEGEMPLNTYSNKAPFKAKVRSVEKITGPKATGETCHIIIETEGKIPFWEGQSYGVIPPGTKINSKGKEVPTARLYSIASSRYGDDGDGQTASLCVRRAVYVDPETGKEDPAKKGLCSNFLCDATPGTEISMTGPTGKVLLLPAD 201          
BLAST of EY684582 vs. ExPASy Swiss-Prot
Match: BOXA_AZOEV (Benzoyl-CoA oxygenase component A OS=Azoarcus evansii GN=boxA PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.790e-19
Identity = 56/138 (40.58%), Postives = 77/138 (55.80%), Query Frame = 3
Query:  384 VNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYK--EGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPLG*SENTRPVGKEWLLQRDPGGS 791
            VN + P  P       N ++T +DA  +  H+V    G  P+   EGQSIG+I  GVD+ GKPH LR+YS+AS   G+      +SL VKR+V  +E G   +GV SN++CDLK     + T P G  +L+   PG S
Sbjct:  137 VNLYTPANPITATVTGNYRLTAEDASSDIHHIVLDF-GTTPFPVLEGQSIGIIPPGVDEKGKPHLLRMYSVASPRDGERPHYNNLSLTVKRVVEDHE-GNPTRGVASNYVCDLKKGDKVQVTGPYGSTYLMPNHPGSS 272          
The following BLAST results are available for this feature:
BLAST of EY684582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
FENR2_PEA1.971e-2643.64Ferredoxin--NADP reductase, root isozyme, chloropl... [more]
FENR2_ORYSJ2.574e-2637.98Ferredoxin--NADP reductase, root isozyme, chloropl... [more]
FENR_CHLRE6.340e-2541.67Ferredoxin--NADP reductase, chloroplastic OS=Chlam... [more]
BOXA_AZOEV6.790e-1940.58Benzoyl-CoA oxygenase component A OS=Azoarcus evan... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-H03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684582 ID=EY684582; Name=EY684582; organism=Citrus sinensis; type=EST; length=1017bp
TTTTATGAGGGGGAGGGGGAAGAGAAAAATAAAAAACAGACAAAAAAATT
GNGNTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
CACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCACT
TATCAATCATGGCTGCAGTGAGTGCTGCAGTTTCTCTTCCGACTTCCAAG
TCCACTTCGCTTCCAACCAGAACCTCTATCATCTCTCCTGACAGAATCAC
CTTAAAAAAGGTTCCATTTTACTACAAAGATGTTTCAACTGGAGGGAGAG
TGGTTTCTGTCAGAGCTCAGGTTACCACTGAGGCTCCTGCTAAGGTCGAG
AAAGAGTCCAAGAAAATGGAGGAAGGTGTTATTGTTAACAAGTTCAAACC
TAAGACACCTTACATTGGCAGATGCCTTTTAAACACTAAGATCACTGGTG
ATGATGCTCCTGGAGAGACCTGGCACATGGTCTTCAGCACTGAAGGAGAG
GTTCCCTACAAAGAAGGGCAATCAATTGGGGTGATTGCAGATGGTGTTGA
CAAGAATGGGAAGCCTCACAAACTGAGATTATACTCCATTGCTAGCAGTG
CCCTTGGTGACTTTGGAGACTCCAAAACTGTTTCTTTATGTGTGAAAAGG
CTTGTGTACACCAACGAAAATGGAGAAATTGTTAAGGGAGTCTGCTCAAA
TTTCTTGTGTGACTTGAAGCCATTGGGCTGAAGTGAAAATACACGACCTG
TTGGGAAAGAATGGCTCTTGCAAAGGGACCCAGGGGGCAGTCGTCATGCC
TTACGACGGGAACTGCAATCGTACATTCCGAGGGAATTTGGTGGGAAAAC
GTATGTGAGGAGAGACCAACAACTACGAGGGGAAGGGCTGGCCAGGAGGG
TCTACAGGAGAGCGCGGAAAACGGGGCCATGAGCGCACCCGAGCCCAGCA
CGTACAACTCATCACACGGCCTCGAACCCCTTACCGAAGTCATGTCCTCT
TCTACCATTGAGGGGCC
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