EY684574

Overview
NameEY684574
Unique NameEY684574
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684574 vs. ExPASy Swiss-Prot
Match: FRIH1_XENLA (Ferritin heavy chain 1 OS=Xenopus laevis PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 38/83 (45.78%), Postives = 46/83 (55.42%), Query Frame = 3
Query:  207 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMP 455
            S  R  F  DCEAAIN  +N+E   SYVY +M  YFDRD+VAL  +                K ++YQNKRGG+V LQ I  P
Sbjct:    3 SQVRQNFNSDCEAAINRMVNLEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRVVLQDIKKP 85          
BLAST of EY684574 vs. ExPASy Swiss-Prot
Match: FRIH1_SCHMA (Ferritin-1 heavy chain OS=Schistosoma mansoni GN=SCM-1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.060e-12
Identity = 36/84 (42.86%), Postives = 48/84 (57.14%), Query Frame = 3
Query:  204 LSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMP 455
            +SL R  + ++CEA +N+QIN+E   SYVY  M  +F+RD+VAL G                 KLM YQN RGG++ LQ I  P
Sbjct:    1 MSLCRQNYHEECEAGVNKQINMELYASYVYMTMAFHFNRDDVALNGFYKFFLNESEEERQHAIKLMTYQNMRGGRIVLQDISAP 84          
BLAST of EY684574 vs. ExPASy Swiss-Prot
Match: FRI_PACLE (Ferritin OS=Pacifastacus leniusculus PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 37/83 (44.58%), Postives = 50/83 (60.24%), Query Frame = 3
Query:  207 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMP 455
            S  RH + +DCE  IN+QIN+E+  SYVY +M  YFDRD+++L G                 KLM+YQNKRG ++ LQ+I  P
Sbjct:    3 SQIRHNYHEDCEP-INKQINLEFYASYVYMSMGHYFDRDDISLPGASKFFKDSSDEEREHGQKLMKYQNKRGARIVLQAIAAP 84          
BLAST of EY684574 vs. ExPASy Swiss-Prot
Match: FRIH_PAGBE (Ferritin, heavy subunit OS=Pagothenia bernacchii PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 41/96 (42.71%), Postives = 51/96 (53.12%), Query Frame = 3
Query:  207 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDAL 494
            S  R  F  DCEAAIN QIN+E   SY Y +M  YFDRD+VAL G                 KL+++QN+RGG++ LQ +  P    D  E G  L
Sbjct:    3 SQVRQNFHKDCEAAINRQINLELYASYSYLSMAYYFDRDDVALPGFAHFFKQQSEEEREHAEKLLKFQNQRGGRIFLQDVKKP----DRDEWGSGL 94          
BLAST of EY684574 vs. ExPASy Swiss-Prot
Match: FRIH2_XENLA (Ferritin heavy chain 2 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 38/83 (45.78%), Postives = 46/83 (55.42%), Query Frame = 3
Query:  207 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMP 455
            S  R  F  DCEAAIN  +N+E   SYVY +M  YFDRD+VAL  +                K ++YQNKRGG+V LQ I  P
Sbjct:    3 SQVRQNFHSDCEAAINRMVNMEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRVVLQDIKKP 85          
BLAST of EY684574 vs. ExPASy Swiss-Prot
Match: FRIH_TRENE (Ferritin, heavy subunit OS=Trematomus newnesi PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 42/96 (43.75%), Postives = 50/96 (52.08%), Query Frame = 3
Query:  207 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDAL 494
            S  R  F  DCEAAIN QIN+E   SY Y +M  YFDRD+VAL G                 KLM+ QN+RGG++ LQ +  P    D  E G  L
Sbjct:    3 SQVRQNFHKDCEAAINRQINLELYASYSYLSMAYYFDRDDVALPGFAHFFKHQSEEEREHAEKLMKQQNQRGGRIFLQDVKKP----DRDEWGSGL 94          
BLAST of EY684574 vs. ExPASy Swiss-Prot
Match: FRIS_LYMST (Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.818e-12
Identity = 38/84 (45.24%), Postives = 47/84 (55.95%), Query Frame = 3
Query:  204 LSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMP 455
            +S AR  +  + EA IN QIN+E   SY Y +M  YFDRD+VAL G                 KLM+YQNKRGG++ LQ I  P
Sbjct:    3 VSQARQNYHAESEAGINRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQNKRGGRIVLQDIKKP 86          
BLAST of EY684574 vs. ExPASy Swiss-Prot
Match: FRIH3_XENLA (Ferritin heavy chain, oocyte isoform OS=Xenopus laevis PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.818e-12
Identity = 38/83 (45.78%), Postives = 47/83 (56.63%), Query Frame = 3
Query:  207 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMP 455
            S  R  F  +CEAAIN Q+N+E   SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P
Sbjct:    3 SQIRQNFHQECEAAINRQVNMELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKMQNQRGGRLFLQDIKKP 85          
BLAST of EY684574 vs. ExPASy Swiss-Prot
Match: FRI3_RANCA (Ferritin, lower subunit OS=Rana catesbeiana PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.818e-12
Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = 3
Query:  207 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMP 455
            S  R  F  DCEA +N  +N++++ SYVY +M +YF+RD+VAL                   KL+EYQN+RGG+V LQS+  P
Sbjct:    3 SQVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFLQSVEKP 85          
BLAST of EY684574 vs. ExPASy Swiss-Prot
Match: FRIH_MOUSE (Ferritin heavy chain OS=Mus musculus GN=Fth1 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.904e-12
Identity = 39/88 (44.32%), Postives = 47/88 (53.41%), Query Frame = 3
Query:  192 TVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMP 455
            T    S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P
Sbjct:    2 TTASPSQVRQNYHQDAEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP 89          
The following BLAST results are available for this feature:
BLAST of EY684574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
FRIH1_XENLA2.343e-1245.78Ferritin heavy chain 1 OS=Xenopus laevis PE=2 SV=2[more]
FRIH1_SCHMA3.060e-1242.86Ferritin-1 heavy chain OS=Schistosoma mansoni GN=S... [more]
FRI_PACLE3.997e-1244.58Ferritin OS=Pacifastacus leniusculus PE=1 SV=1[more]
FRIH_PAGBE3.997e-1242.71Ferritin, heavy subunit OS=Pagothenia bernacchii P... [more]
FRIH2_XENLA3.997e-1245.78Ferritin heavy chain 2 OS=Xenopus laevis PE=2 SV=1[more]
FRIH_TRENE5.220e-1243.75Ferritin, heavy subunit OS=Trematomus newnesi PE=1... [more]
FRIS_LYMST6.818e-1245.24Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2[more]
FRIH3_XENLA6.818e-1245.78Ferritin heavy chain, oocyte isoform OS=Xenopus la... [more]
FRI3_RANCA6.818e-1242.17Ferritin, lower subunit OS=Rana catesbeiana PE=1 S... [more]
FRIH_MOUSE8.904e-1244.32Ferritin heavy chain OS=Mus musculus GN=Fth1 PE=1 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-G05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684574 ID=EY684574; Name=EY684574; organism=Citrus sinensis; type=EST; length=906bp
CGGACGCGTGGGATCCTCTGTTTTCCTCTGTTTCTTCAGCCTTTCCGCCG
AAACCGAGTCTCCGTTTTTCTTCACCGAAAAACGATAACGGCGTGGTGGT
CTGCGCCTCTAAAAATGCTAACAACAGCCCTTTAACCGGCGTCATTTTTG
CTCCCTTTGAAGAGGTGAAAAAGGAGCTCGATTTGGTCCCAACTGTGCCT
CAACTGTCTCTTGCCAGACACAAGTTCACTGACGATTGTGAGGCCGCAAT
CAACGAGCAGATCAATGTGGAATACAATGTCTCCTATGTGTATCATGCCA
TGTTTGCTTACTTTGACAGAGACAATGTCGCGCTCAAGGGTCTCGCCAAG
TTTTTCAAGGAATCAAGTGAAGAGGAAAGAGAGCATGCTGAGAAATTGAT
GGAATATCAGAACAAACGAGGAGGTAAAGTGAAGCTGCAATCAATATTGA
TGCCTCTCTCTGAGTTTGATCATGCTGAGAAAGGAGATGCTTTGTATGAT
GTAGATGAATAATCAAGTGGTTACTTGGGTGATGATAGATGAAGTCATGG
AGCTGTTTTTGACCTTTGAGAACTGCCCATTACGATGCACTTGTTGTGAG
TAAATTATCTATTTTTTTTACACTAATTGTTTGCAACTGTGATGATTCAG
CCATGGAGCTTACGCTGTCTCTGGAGAAGCTAACAAATGAGAAACTCCTC
AACTTGCACCAGGTGGGCAACAAAGAACAAGGATGTGCAAGTTGGAGATT
TCGTTGAAAGCAAGTATTTACACGAGCANGGAGAAACCCTCAAAAAGAAT
CTGAATATGTTGCTCAACTGAAAAAAGTGGCCAAGGGCATTGGTGGCAGG
ACTTTGATAAAGGCTGCTCCAGAGGGGAGAAAATGGCCCAAGAATGGGGA
ACCATC
back to top