EY684566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684566 vs. ExPASy Swiss-Prot
Match: GRWD1_BOVIN (Glutamate-rich WD repeat-containing protein 1 OS=Bos taurus GN=GRWD1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.605e-13 Identity = 38/117 (32.48%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 327 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPA--VKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPEKSSVF 671 ++GH +VED+Q+ P+ F S D+ + +WD R+ + A + AH+ D++ ++W+ H +L+G D ++ ++D R+ S GSP+ F+ H A V V+W P+ S VF Sbjct: 257 FVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWS-HREPFLLSGGDDGALKVWDLRQFKS---GSPVATFKQHVAPVTSVEWHPQDSGVF 369
BLAST of EY684566 vs. ExPASy Swiss-Prot
Match: GRWD1_DICDI (Glutamate-rich WD repeat-containing protein 1 OS=Dictyostelium discoideum GN=grwd1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.626e-13 Identity = 52/197 (26.40%), Postives = 89/197 (45.18%), Query Frame = 3 Query: 165 VVLWSVQDHVSALAAEPGSAKSTA--------------------------SGGANSK----NASKSGGNGDKPLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPEKSS 665 V +W++ +H+ AL E + K TA +G N+ NAS+S D + GH ++VED+Q+ PS + F S D + +WD R PA+ V KAH AD++ + W+ + L+++G D S ++D R + SP+ F+ H+ + ++W+P + S Sbjct: 218 VYIWNIANHLKALDNETVAPKQTAPLHTISNHSIEGYALDWSPKIAGRLATGDCNNSIFVTNASESTWKTDTQA----------FKGHTESVEDIQWSPSEEKVFASCSIDQTVRIWDIRK-PKPAITV-KAHTADVNVISWSRNVEYLLVSGCDDGSFRVWDLRAFKDN---SPVSDFKYHTGPITSIEWNPYEES 399
BLAST of EY684566 vs. ExPASy Swiss-Prot
Match: GRWD1_MOUSE (Glutamate-rich WD repeat-containing protein 1 OS=Mus musculus GN=Grwd1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.510e-12 Identity = 37/117 (31.62%), Postives = 65/117 (55.56%), Query Frame = 3 Query: 327 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARS--GSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPEKSSVF 671 ++GH +VED+Q+ P+ F S D+ + +WD R+ G + AH+ D++ + W+ + +L+G D ++ ++D R+ S GSP+ F+ H A V V+W P+ S VF Sbjct: 257 FVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSRRE-PFLLSGGDDGALKVWDLRQFKS---GSPVATFKQHMAPVTSVEWHPQDSGVF 369
BLAST of EY684566 vs. ExPASy Swiss-Prot
Match: GRWD1_HUMAN (Glutamate-rich WD repeat-containing protein 1 OS=Homo sapiens GN=GRWD1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.510e-12 Identity = 37/117 (31.62%), Postives = 66/117 (56.41%), Query Frame = 3 Query: 327 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPA--VKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPEKSSVF 671 ++GH +VED+Q+ P+ F S D+ + +WD R+ + A + AH+ D++ + W+ + +L+G D ++ ++D R+ S GSP+ F+ H A V V+W P+ S VF Sbjct: 257 FVGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRRE-PFLLSGGDDGALKIWDLRQFKS---GSPVATFKQHVAPVTSVEWHPQDSGVF 369
BLAST of EY684566 vs. ExPASy Swiss-Prot
Match: MSI3_ARATH (WD-40 repeat-containing protein MSI3 OS=Arabidopsis thaliana GN=MSI3 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 3.278e-12 Identity = 57/201 (28.36%), Postives = 85/201 (42.29%), Query Frame = 3 Query: 81 PDLILTGHQDNAEFALAMCPTEPYVLSG-----VVLWSVQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPEKSSV 668 PDL L GH+ E Y+LSG + LW V SA +T DK L + Y GH+ +EDV + + F S GDD L++WD R+ K H +I+ + +NP + ++ T S+D+++ +FD RKLT +P+H H V V+W P +V Sbjct: 161 PDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDV------------SATAT-----------------DKVLNPMHV-----YEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQ--HQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLT-----APLHVLSKHEGEVFQVEWDPNHETV 320
BLAST of EY684566 vs. ExPASy Swiss-Prot
Match: GRWD1_RAT (Glutamate-rich WD repeat-containing protein 1 OS=Rattus norvegicus GN=Grwd1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.278e-12 Identity = 37/117 (31.62%), Postives = 65/117 (55.56%), Query Frame = 3 Query: 327 YLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARS--GSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPEKSSVF 671 ++GH +VED+Q+ P+ F S D+ + +WD R+ G + AH+ D++ + W+ + +L+G D ++ ++D R+ S GSP+ F+ H A V V+W P+ S VF Sbjct: 256 FVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSRRE-PFLLSGGDDGTLKVWDLRQFKS---GSPVATFKQHVAPVTSVEWHPQDSGVF 368
BLAST of EY684566 vs. ExPASy Swiss-Prot
Match: RRB1_SCHPO (Ribosome assembly protein rrb1 OS=Schizosaccharomyces pombe GN=rrb1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 7.303e-12 Identity = 57/218 (26.15%), Postives = 93/218 (42.66%), Query Frame = 3 Query: 21 IWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPYVLSGVVLWSVQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARS-GSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKL-TSDGVGSPIHKFEGHSAAVLCVQWSPEKSSV 668 IWD+ L + DS P ++++ +++ + + TE Y L WS P + AN +K G + SP +L H VED+Q+ PS F S D +WD R+ T A+ V D++ + WN NL+ TG+ + ++D R L +S V +P+ F+ H A + ++W P + SV Sbjct: 214 IWDIAPH------LRSLDS-PGVMVSRKENSPLYTVNRHKTEGYALD----WS-----------PFEYSLLSGDNANEIFLTKYSNGGWQTDSSP-------FLSHTAAVEDLQWSPSEKNVFSSCSCDGTFRIWDVRNKQKTSALTVNAHPGVDVNVLSWNTRVPNLLATGADNGVWSVWDLRSLKSSSSVATPVASFKWHRAPIYSIEWHPNEDSV 402
BLAST of EY684566 vs. ExPASy Swiss-Prot
Match: MSI2_ARATH (WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana GN=MSI2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 7.303e-12 Identity = 55/202 (27.23%), Postives = 85/202 (42.08%), Query Frame = 3 Query: 81 PDLILTGHQDNAEFALAMCP-TEPYVLSG-----VVLWSVQDHVSALAAEPGSAKSTASGGANSKNASKSGGNGDKPLESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPEKSSV 668 PDL L GH D + L+ P E Y+LSG + LW V S DK L + + Y GHE + DV + + F S G+D L++WD R+ K H +++ + +NP + ++ T S+D+++ +FD RKL +P+H H V V+W P +V Sbjct: 160 PDLRLVGH-DKEGYGLSWSPFKEGYLLSGSQDQKICLWDV-----------------------------SATPQDKVLNAMFV-----YEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQ--HQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKL-----NAPLHVMSSHEGEVFQVEWDPNHETV 319
BLAST of EY684566 vs. ExPASy Swiss-Prot
Match: HAT2_SCHPO (Histone acetyltransferase type B subunit 2 OS=Schizosaccharomyces pombe GN=mis16 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.182e-11 Identity = 51/152 (33.55%), Postives = 69/152 (45.39%), Query Frame = 3 Query: 297 ESPSIGARGKYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDAR-SGSTPAVKVEKAHNADIHCVDWNPHDVNLILTGSADNSIHMFDRRKLTSDGVGSPIHKFEGHSAAVLCVQWSPEKSSVFWKFCTG-----WNFKHLGIMEKIGEE 734 E+ I KY H D V DVQF P SV DD L + D R + A KV +AH+ I+ V NP + L+ T SAD ++ ++D R +H EGH V ++WSP + T W+ +EKIGEE Sbjct: 221 ETKVISPIAKYHRHTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLATASADKTVALWDLR-----NPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWD------LEKIGEE 361 The following BLAST results are available for this feature:
BLAST of EY684566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY684566 ID=EY684566; Name=EY684566; organism=Citrus sinensis; type=EST; length=951bpback to top |