EY684565
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_METJA (50S ribosomal protein L2P OS=Methanocaldococcus jannaschii GN=rpl2p PE=3 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 4.259e-49 Identity = 100/214 (46.73%), Postives = 135/214 (63.08%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 MG+ + +QR+G GS V+ +H R+G A++R D E+ G + G + +I+HDPGR AP+A+V + ++ L + EG+ G + CG A + GN+LP+ +IPEG V N+E GD G L RA G YA I++H D + T VKLPSG K + S CRA IG VAGGGR EKP +KAG YH + K WP+VRGVAMN V+HP GG Sbjct: 1 MGKRLISQRRGRGSSVYTCPSHKRRGEAKYRRFDELEKKGKVLGKIVDILHDPGRSAPVAKVEYE-----TGEEGLLVVPEGVKVGDIIECGVSAEIKPGNILPLGAIPEGIPVFNIETVPGDGGKLVRAGGCYAHILTH--DGERTYVKLPSGHIKALHSMCRATIGVVAGGGRKEKPFVKAGKKYHAMKAKAVKWPRVRGVAMNAVDHPFGG 207 HSP 2 Score: 28.1054 bits (61), Expect = 4.259e-49 Identity = 15/29 (51.72%), Postives = 18/29 (62.07%), Query Frame = 3 Query: 660 QHMGHASTV-RGDLPPASKVGLIAPRRIG 743 QH G +TV R +PP KVG I+ RR G Sbjct: 211 QHTGKPTTVSRKKVPPGRKVGHISARRTG 239
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_METVA (50S ribosomal protein L2P OS=Methanococcus vannielii GN=rpl2p PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 3.549e-48 Identity = 99/214 (46.26%), Postives = 134/214 (62.62%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 MG+ + +Q +G G+ ++S +H RKG ++RS D E+ G + G V +++HDPGR AP+A+V F + ++ L + EG+ G+ + CG A + GNVLP+ IPEG V N+E GD G L RA G YA +++H D T VKLPSG K++ CRA IG VAGGGR EKP +KAG +H K WPKVRGVAMN V+HP GG Sbjct: 1 MGKRLISQNRGRGTPKYRSPSHKRKGEVKYRSYDEMEKVGKVLGTVIDVLHDPGRSAPVAKVRFANG-----EERLVLIPEGISVGEQIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGGKLVRAGGCYAHVVAH--DIGKTIVKLPSGYAKVLNPACRATIGVVAGGGRKEKPFVKAGKKHHSLSAKAVAWPKVRGVAMNAVDHPYGG 207 HSP 2 Score: 27.335 bits (59), Expect = 3.549e-48 Identity = 13/26 (50.00%), Postives = 16/26 (61.54%), Query Frame = 3 Query: 660 QHMGHASTVRGDLPPASKVGLIAPRR 737 QH+G S+V + P KVG IA RR Sbjct: 211 QHLGKPSSVSRNTSPGRKVGHIASRR 236
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_PYRFU (50S ribosomal protein L2P OS=Pyrococcus furiosus GN=rpl2p PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.624e-48 Identity = 101/215 (46.98%), Postives = 133/215 (61.86%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGGR 654 MG+ + QR+G GS FKS +H +G ++ L++ + L+GVV EI+HDPGR AP+ARV F + ++L IA EG+ GQ +Y G A + VGN LP+ IPEG V N+E GD G RA G YA+++S PD V+LPSG K CRA IG VAGGGR EKPL+KAG AY++++ + WP RGV MN V HP GG+ Sbjct: 1 MGKSLIQQRRGKGSPTFKSPSHRFRGAVKYIPLNYTQEKT-LRGVVEEIMHDPGRTAPVARVKFENGI-----EKLIIAPEGLLVGQEIYIGPDAPIAVGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREPDK--VIVQLPSGELKAFNPMCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNKFWPTPRGVKMNAVNHPFGGK 207 HSP 2 Score: 28.4906 bits (62), Expect = 4.624e-48 Identity = 14/28 (50.00%), Postives = 15/28 (53.57%), Query Frame = 3 Query: 663 HMGHASTVRGDLPPASKVGLIAPRRIGR 746 H G +T PP KVG IA RR GR Sbjct: 210 HPGKPTTTSRRAPPGRKVGHIAARRTGR 237
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_AERPE (50S ribosomal protein L2P OS=Aeropyrum pernix GN=rpl2p PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 2.267e-47 Identity = 100/214 (46.73%), Postives = 128/214 (59.81%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 MG+ +R QR G G+ ++S H GPA++ L L+G V E+IHDPGR PLARV + L AAEGMY GQ + G A GN+LP+ IPEG V NVE GD G LAR +G YA+++ T ++LPSG K +P+ RA IG AG GR EKP++KAG AYH+++VK WP+VRGVAMN V+HP GG Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLARVVREDGVEF-----LMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELRPGDGGKLARQAGSYALVVGRA--GAKTILRLPSGKDKEVPNDSRATIGIPAGAGRIEKPIMKAGFAYHKWKVKARKWPRVRGVAMNAVDHPFGG 203 HSP 2 Score: 34.2686 bits (77), Expect = 2.267e-47 Identity = 17/29 (58.62%), Postives = 17/29 (58.62%), Query Frame = 3 Query: 660 QHMGHASTVRGDLPPASKVGLIAPRRIGR 746 QH G STV PP KVG IA RR GR Sbjct: 207 QHKGRPSTVARTAPPGRKVGHIAARRTGR 235
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_PYRAB (50S ribosomal protein L2P OS=Pyrococcus abyssi GN=rpl2p PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.851e-47 Identity = 98/215 (45.58%), Postives = 134/215 (62.33%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGGR 654 MG+ + QR+G GS F+S +H +G ++ L++ + + L+GVV EI+HDPGR AP+ARV F + ++L IA EG+ GQ +Y G A + +GN LP+ IPEG V N+E GD G RA G YA+++S + D V+LPSG K CRA IG VAGGGR EKPL+KAG AY++++ + WP RGV MN V HP GG+ Sbjct: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQ-DKTLRGVVEEIMHDPGRTAPVARVRFENGM-----EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGK 207 HSP 2 Score: 28.4906 bits (62), Expect = 3.851e-47 Identity = 14/28 (50.00%), Postives = 15/28 (53.57%), Query Frame = 3 Query: 663 HMGHASTVRGDLPPASKVGLIAPRRIGR 746 H G +T PP KVG IA RR GR Sbjct: 210 HPGKPTTTSRRAPPGRKVGHIAARRTGR 237
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_THEGJ (50S ribosomal protein L2P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl2p PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 6.541e-47 Identity = 96/215 (44.65%), Postives = 131/215 (60.93%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGGR 654 MG+ + QR+G G+ F++ +H +G ++ L+ + L+GVV EI+HDPGR AP+ARV F K+L +A EG+ GQ +Y G +A + +GN LP+ IPEG V N+E GD G RA G YA+++S + D V+LPSG K CRA IG VAGGGR EKP++KAG AY+ + + WPK RGV MN V HP GG+ Sbjct: 1 MGKSLIQQRRGKGTTTFRAPSHRYRGAVKYVPLNIVKEKT-LRGVVEEILHDPGRTAPVARVKFEDG-----TKKLILAPEGVLVGQEIYIGPEAPIAIGNTLPLAKIPEGTYVYNIEGVPGDGGKYVRAGGTYALVVSR--ERDKVIVQLPSGELKQFKPECRATIGVVAGGGRLEKPIVKAGKAYYIAKARNRFWPKPRGVKMNAVNHPHGGK 207 HSP 2 Score: 32.7278 bits (73), Expect = 6.541e-47 Identity = 16/28 (57.14%), Postives = 17/28 (60.71%), Query Frame = 3 Query: 663 HMGHASTVRGDLPPASKVGLIAPRRIGR 746 H+G STV PP KVG IA RR GR Sbjct: 210 HIGRPSTVSRRAPPGRKVGHIAARRTGR 237
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_PYRHO (50S ribosomal protein L2P OS=Pyrococcus horikoshii GN=rpl2p PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.111e-46 Identity = 96/215 (44.65%), Postives = 134/215 (62.33%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGGR 654 MG+ + QR+G GS F+S +H +G ++ L++ + + ++GVV EI+HDPGR AP+ARV F + ++L IA EG+ GQ +Y G A + +GN LP+ IPEG + N+E GD G RA G YA+++S + D V+LPSG K CRA IG VAGGGR EKPL+KAG AY++++ + WP RGV MN V HP GG+ Sbjct: 1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQ-DKTIRGVVEEIMHDPGRTAPVARVKFENGM-----EKLIIAPEGLLVGQEIYIGPDAPVEIGNTLPLAKIPEGTYIYNIEGVPGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFDPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNKFWPTPRGVKMNAVNHPFGGK 207 HSP 2 Score: 28.4906 bits (62), Expect = 1.111e-46 Identity = 14/28 (50.00%), Postives = 15/28 (53.57%), Query Frame = 3 Query: 663 HMGHASTVRGDLPPASKVGLIAPRRIGR 746 H G +T PP KVG IA RR GR Sbjct: 210 HPGKPTTTSRRAPPGRKVGHIAARRTGR 237
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_PYRKO (50S ribosomal protein L2P OS=Pyrococcus kodakaraensis GN=rpl2p PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.111e-46 Identity = 96/215 (44.65%), Postives = 131/215 (60.93%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGGR 654 MG+ + QR+G G+ F++ +H +G ++ L+ + L+GVV EI+HDPGR AP+ARV F K+L IA EG+ GQ +Y G +A + +GN LP+ IPEG V ++E GD G RA G YA+++S + D V+LPSG K CRA IG VAGGGR EKP++KAG AY+ + + WPK RGV MN V HP GG+ Sbjct: 1 MGKSLIQQRRGKGTTTFRAPSHRYRGAVRYVPLNLVQERT-LRGVVEEILHDPGRTAPVARVKFEDG-----TKKLIIAPEGVLVGQEIYIGPEAPIAIGNTLPLAKIPEGTYVYDIEGVPGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFNPMCRATIGVVAGGGRLEKPIVKAGKAYYIAKARNRFWPKPRGVKMNAVNHPHGGK 207 HSP 2 Score: 32.7278 bits (73), Expect = 1.111e-46 Identity = 16/28 (57.14%), Postives = 17/28 (60.71%), Query Frame = 3 Query: 663 HMGHASTVRGDLPPASKVGLIAPRRIGR 746 H+G STV PP KVG IA RR GR Sbjct: 210 HIGRPSTVSRRAPPGRKVGHIAARRTGR 237
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_HALSA (50S ribosomal protein L2P OS=Halobacterium salinarium GN=rpl2p PE=3 SV=3) HSP 1 Score: 179.489 bits (454), Expect = 1.448e-46 Identity = 99/214 (46.26%), Postives = 128/214 (59.81%), Query Frame = 1 Query: 13 MGRVIRAQRKGAG-SVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 MGR I+ QR+G G S F++ +H K + E L G V ++ HDP R AP+ARV F + L +A+EG+ G + G AT+ GN LP+ IPEG VCNVE H GD G ARA G A +++H + D T V+LPSG K + CRA IG VAGGGRTEKP +KAGN +H+ + + WP+VRGVAMN V+HP GG Sbjct: 1 MGRRIQGQRRGRGTSTFRAPSHRYKAELSHKRT---EDTDVLAGEVIDVEHDPARSAPVARVAFEDD-----DQRLVLASEGVGVGDTIEIGISATIEEGNTLPLAEIPEGVPVCNVESHPGDGGKFARAGGVNADLVTH--ERDATIVELPSGETKRLSPDCRATIGVVAGGGRTEKPFVKAGNKHHKMKARGTKWPRVRGVAMNAVDHPFGG 204 HSP 2 Score: 28.8758 bits (63), Expect = 1.448e-46 Identity = 14/29 (48.28%), Postives = 16/29 (55.17%), Query Frame = 3 Query: 660 QHMGHASTVRGDLPPASKVGLIAPRRIGR 746 QH G +V D P KVG IA +R GR Sbjct: 208 QHPGRPKSVSRDAAPGRKVGDIASKRTGR 236
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_HALS3 (50S ribosomal protein L2P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.448e-46 Identity = 99/214 (46.26%), Postives = 128/214 (59.81%), Query Frame = 1 Query: 13 MGRVIRAQRKGAG-SVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 MGR I+ QR+G G S F++ +H K + E L G V ++ HDP R AP+ARV F + L +A+EG+ G + G AT+ GN LP+ IPEG VCNVE H GD G ARA G A +++H + D T V+LPSG K + CRA IG VAGGGRTEKP +KAGN +H+ + + WP+VRGVAMN V+HP GG Sbjct: 1 MGRRIQGQRRGRGTSTFRAPSHRYKAELSHKRT---EDTDVLAGEVIDVEHDPARSAPVARVAFEDD-----DQRLVLASEGVGVGDTIEIGISATIEEGNTLPLAEIPEGVPVCNVESHPGDGGKFARAGGVNADLVTH--ERDATIVELPSGETKRLSPDCRATIGVVAGGGRTEKPFVKAGNKHHKMKARGTKWPRVRGVAMNAVDHPFGG 204 HSP 2 Score: 28.8758 bits (63), Expect = 1.448e-46 Identity = 14/29 (48.28%), Postives = 16/29 (55.17%), Query Frame = 3 Query: 660 QHMGHASTVRGDLPPASKVGLIAPRRIGR 746 QH G +V D P KVG IA +R GR Sbjct: 208 QHPGRPKSVSRDAAPGRKVGDIASKRTGR 236 The following BLAST results are available for this feature:
BLAST of EY684565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684565 ID=EY684565; Name=EY684565; organism=Citrus sinensis; type=EST; length=883bpback to top |