EY684565
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RK2A_ATRBE (50S ribosomal protein L2-A, chloroplastic OS=Atropa belladonna GN=rpl2-A PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.548e-20 Identity = 64/210 (30.48%), Postives = 102/210 (48.57%), Query Frame = 1 Query: 22 VIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 +I A+ +G G H++ +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP+ +P G + N+E +G G LARA+G A +I+ + + +KLPSG ++I C A +GQV G +K L +AG+ + P VRGV MNPV+HP GG Sbjct: 46 IITARHRGGG--------HKR---LYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKRWLGK-----RPVVRGVVMNPVDHPHGG 232
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_SHESW (50S ribosomal protein L2 OS=Shewanella sp. (strain W3-18-1) GN=rplB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.116e-19 Identity = 61/186 (32.80%), Postives = 94/186 (50.54%), Query Frame = 1 Query: 97 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 +R +DF + + + +DP R A +A V + ++ +AA+GM G + G +A + GN +P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HP GG Sbjct: 62 YRLIDFKRDKDGIPAKIERLEYDPNRTANIALVLYADG-----ERRYILAAKGMQAGDKIQSGVEAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAGAKRWRGIR------PTVRGVAMNPVDHPHGG 234
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_SHESR (50S ribosomal protein L2 OS=Shewanella sp. (strain MR-7) GN=rplB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.116e-19 Identity = 62/185 (33.51%), Postives = 95/185 (51.35%), Query Frame = 1 Query: 97 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 +R +DF + + + +DP R A +A V + ++ +AA+GM G + G +A + GN +P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG A V+P VRGVAMNPV+HP GG Sbjct: 62 YRLIDFKRDKDGIPAKIERLEYDPNRTAHIALVLYADG-----ERRYILAAKGMQAGDKIQSGVEAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAG-AKRWRGVRPT----VRGVAMNPVDHPHGG 234
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_SHESM (50S ribosomal protein L2 OS=Shewanella sp. (strain MR-4) GN=rplB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.116e-19 Identity = 62/185 (33.51%), Postives = 95/185 (51.35%), Query Frame = 1 Query: 97 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 +R +DF + + + +DP R A +A V + ++ +AA+GM G + G +A + GN +P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG A V+P VRGVAMNPV+HP GG Sbjct: 62 YRLIDFKRDKDGIPAKIERLEYDPNRTAHIALVLYADG-----ERRYILAAKGMQAGDKIQSGVEAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAG-AKRWRGVRPT----VRGVAMNPVDHPHGG 234
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_SHESA (50S ribosomal protein L2 OS=Shewanella sp. (strain ANA-3) GN=rplB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.116e-19 Identity = 62/185 (33.51%), Postives = 95/185 (51.35%), Query Frame = 1 Query: 97 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 +R +DF + + + +DP R A +A V + ++ +AA+GM G + G +A + GN +P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG A V+P VRGVAMNPV+HP GG Sbjct: 62 YRLIDFKRDKDGIPAKIERLEYDPNRTAHIALVLYADG-----ERRYILAAKGMQAGDKIQSGVEAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAG-AKRWRGVRPT----VRGVAMNPVDHPHGG 234
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_SHEPC (50S ribosomal protein L2 OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=rplB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.116e-19 Identity = 61/186 (32.80%), Postives = 94/186 (50.54%), Query Frame = 1 Query: 97 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 +R +DF + + + +DP R A +A V + ++ +AA+GM G + G +A + GN +P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HP GG Sbjct: 62 YRLIDFKRDKDGIPAKIERLEYDPNRTANIALVLYADG-----ERRYILAAKGMQAGDKIQSGVEAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAGAKRWRGIR------PTVRGVAMNPVDHPHGG 234
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_SHEON (50S ribosomal protein L2 OS=Shewanella oneidensis GN=rplB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.116e-19 Identity = 61/186 (32.80%), Postives = 94/186 (50.54%), Query Frame = 1 Query: 97 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 +R +DF + + + +DP R A +A V + ++ +AA+GM G + G +A + GN +P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HP GG Sbjct: 62 YRLIDFKRDKDGIPAKIERLEYDPNRTAHIALVLYADG-----ERRYILAAKGMQAGDKIQSGVEAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAGAKRWRGIR------PTVRGVAMNPVDHPHGG 234
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_RHOFD (50S ribosomal protein L2 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=rplB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.116e-19 Identity = 67/209 (32.06%), Postives = 102/209 (48.80%), Query Frame = 1 Query: 25 IRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 I + KG G H HH +R +DF + V I +DP R A +A V + ++ IA G+ G + G +A + VGN LP+R+IP G++V +E +G + R++G A +++ + +V++ SG + I CRA +GQVA + + L KAG + P VRGV MNPV+HP GG Sbjct: 49 ITTRHKGGG-----HKHH------YRVVDFLRTKDGIPAKVERIEYDPNRSAHIALVCYADG-----ERRYIIAPRGLEVGASIMSGAEAPIRVGNTLPIRNIPVGSIVHCIELQIGKGAQIVRSAGTSATLLAR--EGIYAQVRMRSGEVRKIHIECRATLGQVANEEHSLRRLGKAGAKRWK-----GIRPTVRGVVMNPVDHPHGG 234
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_RALME (50S ribosomal protein L2 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=rplB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.116e-19 Identity = 73/218 (33.49%), Postives = 108/218 (49.54%), Query Frame = 1 Query: 25 IRAQRKGAGSVFKSHTHHRKGPAQFRSLDF--GERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGGRTPSTWA 672 I + KG G H HH +R +DF +++G + V + +DP R A +A V F ++ IA +GM GQ + G +A + GN LP+R+IP G + NVE G +ARA+G AV+++ + +V+L SG + + CRA IG+V + + + KAG + P VRGV MNPV+HP GG T A Sbjct: 49 ITTRHKGGG-----HKHH------YRVVDFKRNDKDG-IAAKVERLEYDPNRSANIALVLFADG-----ERRYIIATKGMVAGQALMNGSEAPIKAGNNLPIRNIPVGTTINNVEILPGKGAQVARAAGGSAVLLAR--EGLYAQVRLRSGEVRRVHIECRATIGEVGNEEHSLRVIGKAGATRWR-----GIRPTVRGVVMNPVDHPHGGGEGKTAA 242
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_NEIM0 (50S ribosomal protein L2 OS=Neisseria meningitidis serogroup C (strain 053442) GN=rplB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.116e-19 Identity = 69/210 (32.86%), Postives = 103/210 (49.05%), Query Frame = 1 Query: 25 IRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 I + KG G H HH +R +DF + V I +DP R A +A + + ++ IA G+ G + G +A + VGN LP+R+IP G + +E G +AR++G AV+++ + +V+L SG + I CRA IG+V ++ K + KAG N + R P VRGV MNPV+HP GG Sbjct: 49 ITTRHKGGG-----HKHH------YRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADG-----ERRYIIAPRGIQAGAVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGASAVLLA--KEAAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAGANRWRGIR------PTVRGVVMNPVDHPHGG 234 The following BLAST results are available for this feature:
BLAST of EY684565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684565 ID=EY684565; Name=EY684565; organism=Citrus sinensis; type=EST; length=883bpback to top |