EY684565

Overview
NameEY684565
Unique NameEY684565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_MESFL (50S ribosomal protein L2 OS=Mesoplasma florum GN=rplB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.487e-19
Identity = 67/206 (32.52%), Postives = 100/206 (48.54%), Query Frame = 1
Query:   70 THHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCW----PKVRGVAMNPVEHPRG---GRTP 660
            T H+ G    ++R +DF      + G +A I +DP R A +  V +        +K   + A+GM  G  +   + A + VGN  P+++IPEG ++ NVE   G  G +AR++G    I+  + D     ++L SG  + + + C A IG+V   G  E  L+  G A        N W    P VRG  MNP +HP G   GRTP
Sbjct:   52 TRHKGGGHKQKYRIIDFKRNKRDVVGTIATIEYDPNRNAFICLVNYLDG-----EKRYILFAKGMTVGMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQMARSAGTSVQILGKDDDGKYVTLRLTSGEVRKVLADCYATIGEV---GNEEYNLVNWGKAGR------NRWRGIRPTVRGSVMNPNDHPHGGGEGRTP 243          
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_MARAV (50S ribosomal protein L2 OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=rplB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.487e-19
Identity = 68/210 (32.38%), Postives = 108/210 (51.43%), Query Frame = 1
Query:   28 RAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651
            +++  G  +V +  T H  G     +R +DF      +  V+  + +DP R A +A V +        ++   IA +GM  G  V  G  A + VG+ LP+R+IP G+V+  VE   G    LAR++G    +++   +     ++L SG  + +   CRA +G+V+    + K L KAG +  ++R K    P VRGVAMNPV+HP GG
Sbjct:   37 KSKSGGRNNVGRITTRHIGGGHKQHYRVIDFKRTKDGIPAVIERLEYDPNRSAHIALVKYADG-----ERRYIIAPKGMKAGDPVRSGVDAPIKVGSTLPLRNIPVGSVIHCVELKPGKGAQLARSAGASVQLVAR--EGAYATIRLRSGEMRKVLVDCRATLGEVSNSEHSLKQLGKAGAS--RWRGKR---PTVRGVAMNPVDHPHGG 234          
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_EHRCR (50S ribosomal protein L2 OS=Ehrlichia chaffeensis (strain Arkansas) GN=rplB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.487e-19
Identity = 70/211 (33.18%), Postives = 104/211 (49.29%), Query Frame = 1
Query:   19 RVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651
            ++ R  R   G +   H   R     +R +DF      +   V  + +DP R A +A +++        +K   IA  G+  G  V  G  A ++ GN L ++SIP G  V NVE   G+ GV+AR++G YA ++S   D     ++L SG  + + S CRA IG V+        L KAG +     ++P     VRGVAMNP++HP GG
Sbjct:   37 KISRGGRNSRGVITVRH-RGRGHKRLYRVVDFKRNKVGVSATVERLEYDPNRTAFIALLSYDDG-----EKSYIIAPNGLKKGDVVISGDGADILPGNCLLLKSIPVGTFVHNVELRPGNGGVIARSAGTYAQLMS--KDGMYVLLRLSSGEIRKVLSDCRATIGIVSNLDNQNVKLGKAGRS-RWLGIRPT----VRGVAMNPIDHPHGG 234          
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_DESVM (50S ribosomal protein L2 OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=rplB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.487e-19
Identity = 63/189 (33.33%), Postives = 93/189 (49.21%), Query Frame = 1
Query:   97 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCW----PKVRGVAMNPVEHPRGG 651
            +R +DF      +   VA I +DP R A +A + +        +K   +A  G+  G  V  G+ A +  GN +P+  IP G V+ N+E + G  G   RA+G YA +++   +     +++PSG  + + + C A IGQV         L KAG          N W    PKVRGVAMNP++HP GG
Sbjct:   62 YRIIDFRRNKLGIAATVAHIEYDPNRTARIALLHYADG-----EKRYILAPLGIKQGDMVQAGEGADIKPGNAMPMARIPVGTVLHNIELYPGRGGQFCRAAGTYAQLVA--KEGKYALLRMPSGEVRKVLAACCATIGQVGNVNHENISLGKAGR---------NRWLGRRPKVRGVAMNPIDHPLGG 234          
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_DESAD (50S ribosomal protein L2 OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=rplB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.487e-19
Identity = 70/219 (31.96%), Postives = 104/219 (47.49%), Query Frame = 1
Query:   16 GRVIRAQRKGAGSVFKSHTHHRKGPAQ---FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCW----PKVRGVAMNPVEHPRGG 651
            G   +A R   G V    T  R+G      +R +DF      +   VA I +DP R A +A + +        +K   +   G+  G  +  G+KA +  GN L +++IP G +V N+E + G  G   RA+G YA +I+   +     +++PSG  + + + C A +GQV         L KAG          N W    PKVRGVAMNP++HP GG
Sbjct:   36 GLTKKAGRNNNGRV----TSRRRGGGVKRLYRIIDFKRNKVEVPATVASIEYDPNRSARIALLHYADG-----EKRYILCPVGLNKGDKILAGEKADIKPGNALLLKNIPVGTIVHNIELYPGKGGQFCRAAGTYAQLIA--KEGKYALLRMPSGEVRKVLATCCATVGQVGNIHHENITLGKAGR---------NRWLGRRPKVRGVAMNPIDHPLGG 234          
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_BLOFL (50S ribosomal protein L2 OS=Blochmannia floridanus GN=rplB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.487e-19
Identity = 59/186 (31.72%), Postives = 94/186 (50.54%), Query Frame = 1
Query:   94 QFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651
            ++R +DF      +  VV  + +DP R A +A + ++       ++   +A   +  G  +  G    +  GN LP+ +IP G+++ NVE  VG  G LAR++G Y  I+S   D +   ++L SG  + +   CRA IG+V       + L KAG +  +        P VRG AMNP++HP GG
Sbjct:   63 RYRIIDFKRNKDDVFAVVERMEYDPNRSANIALIVYKDG-----ERRYILAPRNLNVGNKIISGLNVPISPGNSLPLSNIPVGSIIHNVEMKVGKGGQLARSAGTYVQIVSR--DGEYIILRLRSGEIRKVRCECRATIGEVGNNEHMLRALGKAGASRWR-----GIRPTVRGTAMNPIDHPHGG 236          
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RK2_CHLVU (50S ribosomal protein L2, chloroplastic OS=Chlorella vulgaris GN=rpl2 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.487e-19
Identity = 65/196 (33.16%), Postives = 97/196 (49.49%), Query Frame = 1
Query:   70 THHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651
            + HR G  +  +R +DF      +   VA I +DP R A +A V ++       +K+  +   G+  GQ +    +A++ +GN LP+  IP G  V N+E   G  G L RA+G  A I++   +     ++LPSG  +++   C A IG+V         L KAG +    R      P VRG AMNPV+HP GG
Sbjct:   51 SRHRGGGHKRLYREIDFARAKVNVPAKVAYIEYDPNRNARIALVNYQDG-----EKKYILHPVGLQVGQTIIASPEASIAIGNCLPLVKIPLGTEVHNIELQPGSGGQLVRAAGTVAQIVA--KEGTWASLRLPSGEVRLVSQNCWATIGRVGNIDAFNLTLGKAGRSRWLGR-----RPHVRGSAMNPVDHPHGG 234          
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_STACT (50S ribosomal protein L2 OS=Staphylococcus carnosus (strain TM300) GN=rplB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.248e-19
Identity = 69/208 (33.17%), Postives = 102/208 (49.04%), Query Frame = 1
Query:   28 RAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651
            RA R   G +   H H      Q+R +DF      +   V  I +DP R A +A + +        +K   IA +G+  GQ +  G++A +  GN LP+ +IP G  + N+E   G  G +AR++G  A ++    +     V+L SG  ++I S CRA +GQV   G  +  L+  G A  + R K    P VRG  MNP +HP GG
Sbjct:   40 RAGRNNQGKLTVRH-HGGGHKRQYRVIDFKRNKDGIPAKVDSIQYDPNRSANIALLVYADG-----EKRYIIAPKGLQVGQTIENGEEADIKTGNALPLANIPVGTTIHNIELKPGRGGQIARSAGASAQVL--GKEGKYVLVRLRSGEVRMILSTCRATVGQV---GNLQHELVNVGKA-GRSRWK-GIRPTVRGSVMNPNDHPHGG 234          
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_SHEPA (50S ribosomal protein L2 OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=rplB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.248e-19
Identity = 64/185 (34.59%), Postives = 94/185 (50.81%), Query Frame = 1
Query:   97 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651
            +R +DF      +   V  + +DP R A +A V +        ++   +AA+GM  G  +  G  A +  GN LP+R+IP G+VV  VE        +AR++G Y  +I+   D     ++L SG  + +P  CRA +G+V       + L KAG A     V+P     VRGVAMNPV+HP GG
Sbjct:   62 YRLIDFKRNKDGIPAKVERLEYDPNRTANIALVLYADG-----ERRYILAAKGMKAGDKIQSGIDAEIKSGNALPLRNIPVGSVVHAVEMKPAKGAQIARSAGAYVQVIAR--DGAYATLRLRSGEMRKVPVDCRATLGEVGNAEHMLRQLGKAG-AKRWRGVRPT----VRGVAMNPVDHPHGG 234          
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_PELTS (50S ribosomal protein L2 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=rplB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.248e-19
Identity = 64/194 (32.99%), Postives = 98/194 (50.52%), Query Frame = 1
Query:   76 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651
            HR G  +  +R +DF      +   VA I +DP R A +A + +        +K   IA  G+  GQ V  G  A +  GN LP+++IP G ++ N+E +    G L R++G  A +++   +     +++PSG  +++   CRA IGQV   G  E   +  G A  +  +     P VRGV MNPV+HP GG
Sbjct:   53 HRGGGHKRLYRIIDFKRDKDGIPAKVASIEYDPNRSARIALLHYADG-----EKRYIIAPAGLEVGQTVVSGPDADIKAGNCLPLKNIPVGTMIHNIELYPNGGGKLVRSAGASAQLMA--KEGKYANIRMPSGEMRLLLQECRATIGQV---GNVEHENITIGKAGRKRWL--GIRPTVRGVVMNPVDHPHGG 234          
The following BLAST results are available for this feature:
BLAST of EY684565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL2_MESFL2.487e-1932.5250S ribosomal protein L2 OS=Mesoplasma florum GN=r... [more]
RL2_MARAV2.487e-1932.3850S ribosomal protein L2 OS=Marinobacter aquaeolei... [more]
RL2_EHRCR2.487e-1933.1850S ribosomal protein L2 OS=Ehrlichia chaffeensis ... [more]
RL2_DESVM2.487e-1933.3350S ribosomal protein L2 OS=Desulfovibrio vulgaris... [more]
RL2_DESAD2.487e-1931.9650S ribosomal protein L2 OS=Desulfovibrio salexige... [more]
RL2_BLOFL2.487e-1931.7250S ribosomal protein L2 OS=Blochmannia floridanus... [more]
RK2_CHLVU2.487e-1933.1650S ribosomal protein L2, chloroplastic OS=Chlorel... [more]
RL2_STACT3.248e-1933.1750S ribosomal protein L2 OS=Staphylococcus carnosu... [more]
RL2_SHEPA3.248e-1934.5950S ribosomal protein L2 OS=Shewanella pealeana (s... [more]
RL2_PELTS3.248e-1932.9950S ribosomal protein L2 OS=Pelotomaculum thermopr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-F06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684565 ID=EY684565; Name=EY684565; organism=Citrus sinensis; type=EST; length=883bp
CCACGCGTCCGAATGGGTCGTGTGATTCGCGCACAGCGTAAGGGTGCAGG
TTCGGTCTTCAAGTCCCACACCCACCACCGTAAGGGTCCGGCCCAGTTCC
GCAGCCTCGACTTCGGTGAGCGTAATGGTTACCTCAAGGGTGTCGTCGCA
GAGATTATTCACGATCCGGGTCGTGGTGCCCCGCTGGCCCGAGTTACCTT
TCGTCACCCTTTTCGCTACATGAAACAAAAGGAGCTTTTCATTGCCGCCG
AGGGTATGTACACGGGTCAGTTCGTGTACTGCGGCAAGAAAGCCACTCTG
ATGGTTGGTAATGTGTTGCCCGTTAGATCTATCCCTGAAGGAGCTGTCGT
TTGCAACGTTGAGCATCATGTTGGTGATCGCGGTGTTCTCGCTAGAGCTT
CTGGTGATTATGCCGTTATCATCAGTCATAACCCCGATAATGACACCACC
AGGGTCAAGCTTCCATCTGGTGCCAAAAAGATTATTCCAAGTGGCTGCAG
AGCTATGATTGGGCAGGTTGCCGGCGGAGGGAGGACTGAAAAACCCCTTC
TCAAAGCTGGTAATGCATACCACCAATTCAGAGTGAAGCCGAACTGCTGG
CCTAAGGTGCGTGGTGTGGCCATGAACCCGGTGGAGCATCCTCGTGGAGG
GAGGACCCCCAGCACATGGGCCATGCTAGCACTGTTAGGGGGGATCTTCC
CCCTGCCAGCAAGGTGGGTCTTATTGCACCCAGGAGGATTGGTCGCTTCG
AGGGTGACGGGTGGACTTGGGGCGGGGCGGCGCAAGGATAGTTCGTGGGG
GACGAGAGGCGGTCCTCACGGGATGCTGTCTTTACTTGTGGGGTTCGGCG
CACGGTGGAGAGGTGTTCCACTCCCACTCGGGA
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