EY684565
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RK2_OENPA (50S ribosomal protein L2, chloroplastic OS=Oenothera parviflora GN=rpl2-A PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.248e-19 Identity = 69/221 (31.22%), Postives = 107/221 (48.42%), Query Frame = 1 Query: 1 PRVRMGR----VIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 PR GR +I A +G G H++ +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP++ +P G + N+E +G G LARA+G A +I+ + T +KLPSG ++I + C A +GQV G +K L +AG+ + P VRGV MNPV+HP GG Sbjct: 35 PRCSKGRNARGIITAGHRGGG--------HKR---LYRKIDFRRNERDIYGRIVSIEYDPNRNASICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLK-MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSKRWLGK-----RPVVRGVVMNPVDHPHGG 231
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RK2_OENGL (50S ribosomal protein L2, chloroplastic OS=Oenothera glazioviana GN=rpl2-A PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.248e-19 Identity = 69/221 (31.22%), Postives = 107/221 (48.42%), Query Frame = 1 Query: 1 PRVRMGR----VIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 PR GR +I A +G G H++ +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP++ +P G + N+E +G G LARA+G A +I+ + T +KLPSG ++I + C A +GQV G +K L +AG+ + P VRGV MNPV+HP GG Sbjct: 35 PRCSKGRNARGIITAGHRGGG--------HKR---LYRKIDFRRNERDIYGRIVSIEYDPNRNASICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLK-MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSKRWLGK-----RPVVRGVVMNPVDHPHGG 231
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RK2_OENEH (50S ribosomal protein L2, chloroplastic OS=Oenothera elata subsp. hookeri GN=rpl2-A PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 3.248e-19 Identity = 69/221 (31.22%), Postives = 107/221 (48.42%), Query Frame = 1 Query: 1 PRVRMGR----VIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 PR GR +I A +G G H++ +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP++ +P G + N+E +G G LARA+G A +I+ + T +KLPSG ++I + C A +GQV G +K L +AG+ + P VRGV MNPV+HP GG Sbjct: 35 PRCSKGRNARGIITAGHRGGG--------HKR---LYRKIDFRRNERDIYGRIVSIEYDPNRNASICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLK-MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSKRWLGK-----RPVVRGVVMNPVDHPHGG 231
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RK2_OENBI (50S ribosomal protein L2, chloroplastic OS=Oenothera biennis GN=rpl2-A PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.248e-19 Identity = 69/221 (31.22%), Postives = 107/221 (48.42%), Query Frame = 1 Query: 1 PRVRMGR----VIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 PR GR +I A +G G H++ +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP++ +P G + N+E +G G LARA+G A +I+ + T +KLPSG ++I + C A +GQV G +K L +AG+ + P VRGV MNPV+HP GG Sbjct: 35 PRCSKGRNARGIITAGHRGGG--------HKR---LYRKIDFRRNERDIYGRIVSIEYDPNRNASICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLK-MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSKRWLGK-----RPVVRGVVMNPVDHPHGG 231
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RK2_OENAR (50S ribosomal protein L2, chloroplastic OS=Oenothera argillicola GN=rpl2-A PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.248e-19 Identity = 69/221 (31.22%), Postives = 107/221 (48.42%), Query Frame = 1 Query: 1 PRVRMGR----VIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 PR GR +I A +G G H++ +R +DF + G + I +DP R A + + + +K + G G + G + + +GN LP++ +P G + N+E +G G LARA+G A +I+ + T +KLPSG ++I + C A +GQV G +K L +AG+ + P VRGV MNPV+HP GG Sbjct: 35 PRCSKGRNARGIITAGHRGGG--------HKR---LYRKIDFRRNERDIYGRIVSIEYDPNRNASICLIHYGDG-----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLK-MPLGTALHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISNNCSATVGQVGNVGVNQKSLGRAGSKRWLGK-----RPVVRGVVMNPVDHPHGG 231
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RK2_ANTFO (50S ribosomal protein L2, chloroplastic OS=Anthoceros formosae GN=rpl2 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.248e-19 Identity = 64/196 (32.65%), Postives = 97/196 (49.49%), Query Frame = 1 Query: 70 THHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 + HR G + +R +DF + G +A I +DP R + + +K+ + +GM G V +A + +GN LP+ ++P G + NVE G G LARA+G A II+ + ++LPSG ++I C A IGQV + + KAG+ + PKVRGV MNP++HP GG Sbjct: 51 SRHRGGGHKRIYRKIDFLRDKKDIFGRIATIEYDPNRNTFICLTYYEDG-----EKKYILYPQGMRIGDSVVSSTEAPISIGNALPLTNMPLGTAIHNVEITPGKGGQLARAAGAVAKIIA--KEGRLATLRLPSGEVRLISQKCLATIGQVGNSDANNRTIGKAGSKRWLGK-----RPKVRGVVMNPIDHPHGG 234
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_THISH (50S ribosomal protein L2 OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=rplB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.242e-19 Identity = 60/186 (32.26%), Postives = 96/186 (51.61%), Query Frame = 1 Query: 94 QFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 ++R +DF + G V + +DP R A +A V + ++ IA +G+ G + G A + GN LP+R+IP G VV +E G +AR++G +++ + T R++ SG + +P+ CRA IG+V+ + + KAG A ++P VRG AMNPV+HP GG Sbjct: 61 RYRIIDFKRDKDGIPGRVERLEYDPNRSAHIALVLYADG-----ERRYVIAPKGVQAGDQLLSGTNAPIRAGNTLPLRNIPVGTVVHCIEMKPGKGAQMARSAGAAVQLVAREGQHATLRLR--SGEMRKVPADCRATIGEVSNSEHSLRKFGKAG-AKRWLGIRPT----VRGTAMNPVDHPHGG 234
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_THEYD (50S ribosomal protein L2 OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=rplB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.242e-19 Identity = 61/186 (32.80%), Postives = 93/186 (50.00%), Query Frame = 1 Query: 97 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRH-PFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 +R +DF + + I +DP R A +A + + +RY+ +A +G+ G + G + VGN LP++ IP G ++ N+E G L R++G A +++ + VKLPSG ++I C A IGQV+ + KAG H R P VRGVAMNP++HP GG Sbjct: 62 YRIIDFKRNKHGIPAKIESIQYDPNRSARIALLKYMDGEYRYI------LAPDGLKVGDTIMSGSGIDIKVGNALPLKEIPLGTMIHNIELFPNGGGKLVRSAGTAAQLMA--KEGKYAHVKLPSGEVRLINVNCFATIGQVSNLEHENVIIGKAGRTRHMGR-----RPSVRGVAMNPIDHPLGG 234
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_SYNP2 (50S ribosomal protein L2 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.242e-19 Identity = 63/208 (30.29%), Postives = 99/208 (47.60%), Query Frame = 1 Query: 34 QRKGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 ++KG + HR G + +R +DF + V I +DP R A +A V + +K + G+ G + G++A +GN LP+ IP G + N+E + G G + R++G +A +++ + D +KLPS +++ C A IG+V L KAG H R P+VRG MNPV+HP GG Sbjct: 39 RKKGRNNRGVITCRHRGGGHKRLYRLIDFRRDKRDITAQVTAIEYDPNRNARIALVQYEDG-----EKRYILQPAGLGVGDTIIAGEEAPYEIGNALPLYKIPLGTEIHNIELYAGRGGQMVRSAGAFAQLVA--KEGDYVTIKLPSKEVRMVRKECYATIGKVGNAEARNLKLGKAGRTRHLGR-----RPQVRGSVMNPVDHPHGG 234
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_STRU0 (50S ribosomal protein L2 OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=rplB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.242e-19 Identity = 71/210 (33.81%), Postives = 100/210 (47.62%), Query Frame = 1 Query: 97 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCW----PKVRGVAMNPVEHPRGG---------RTPST-WAMLAL 684 +R +DF ++ VV I +DP R A +A V + K IA +G+ GQ + G +A + +GN LP+ +IP G V+ N+E G G L RA+G A ++ + V+L SG ++I CRA IG V G ++ L+ G A N W P VRG MNP +HP GG + PST W AL Sbjct: 62 YRVIDFKRNKDNVEAVVKTIEYDPNRTANIALVHYTDGV-----KAYIIAPKGLEVGQRIISGPEADIKIGNALPLANIPVGTVIHNIEMKPGKGGELVRAAGASAQVLGQ--EGKYVLVRLQSGEVRMILGTCRATIGSV---GNEQQSLVNIGKAGR------NRWKGVRPTVRGSVMNPNDHPHGGGEGKAPVGRKAPSTPWGKPAL 255 The following BLAST results are available for this feature:
BLAST of EY684565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY684565 ID=EY684565; Name=EY684565; organism=Citrus sinensis; type=EST; length=883bpback to top |