EY684565
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_UNCMA (50S ribosomal protein L2P OS=Uncultured methanogenic archaeon RC-I GN=rpl2p PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.770e-44 Identity = 89/213 (41.78%), Postives = 125/213 (58.69%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 MG+ + +Q +G GS T R FG+ ++G++ E++HDP R P+ RV F + ++ L +A EG+ G + CG A + GN LP+ IPEG +CN+E GD G AR+SG YA+I++H + T V++PSG K + CRA IG VAGGGRTEKP ++AGN +++ K WP VRGVAMN V+HP GG Sbjct: 1 MGKRLMSQNRGKGSPTYRATSSRFKADLEHIKTFGDET--IEGIITEVVHDPARNCPIIRVKFGNG-----EERLILAPEGVGVGDKIACGISAEIKPGNTLPLSEIPEGCAICNIESQPGDGGAFARSSGVYAIIVAH--EGKKTVVQMPSGEIKRLNPKCRATIGVVAGGGRTEKPFVRAGNKWYKMANKATKWPVVRGVAMNAVDHPFGG 204 HSP 2 Score: 31.5722 bits (70), Expect = 3.770e-44 Identity = 15/28 (53.57%), Postives = 16/28 (57.14%), Query Frame = 3 Query: 660 QHMGHASTVRGDLPPASKVGLIAPRRIG 743 QH G TV + PP KVG IA RR G Sbjct: 208 QHPGRPKTVSRNTPPGRKVGSIAARRTG 235
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_THEON (50S ribosomal protein L2P OS=Thermococcus onnurineus (strain NA1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.087e-43 Identity = 92/215 (42.79%), Postives = 129/215 (60.00%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGGR 654 MG+ + QR+G G+ F++ +H +G ++ L+ + L G V EI+HDPGR AP+ARV F + ++L IA EG+ G+ + G A + +GN LP+ IPEG+ V ++E GD G RA G YA+++S + D V+LPSG K CRA IG VAGGGR EKP++KAG AY+ + + WPK RGV MN V HP GG+ Sbjct: 1 MGKSLIQQRRGKGTTTFRAPSHRYRGAVRYVPLNLTKEKT-LVGKVVEILHDPGRTAPVARVKFENGM-----EKLIIAPEGILVGEEIAIGPNAPIKIGNTLPLAMIPEGSYVYDIEGTPGDGGKYVRAGGVYALVVSR--EKDKVIVQLPSGELKQFNPMCRATIGVVAGGGRLEKPIVKAGKAYYIAKARNRFWPKPRGVKMNAVNHPHGGK 207 HSP 2 Score: 32.7278 bits (73), Expect = 1.087e-43 Identity = 16/28 (57.14%), Postives = 17/28 (60.71%), Query Frame = 3 Query: 663 HMGHASTVRGDLPPASKVGLIAPRRIGR 746 H+G STV PP KVG IA RR GR Sbjct: 210 HIGRPSTVSRRAPPGRKVGHIAARRTGR 237
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_METST (50S ribosomal protein L2P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl2p PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.470e-43 Identity = 96/214 (44.86%), Postives = 130/214 (60.75%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 MG+ + QR+G G+ ++S +H +G +RS D ER G L G+V +IIHDPGR AP+A V F + +++L +A E + + CG A++ GN LP+ IPEG V N+E++ GD G R+SG YA +I+H D D T +++PSG K RA +G VAGGGR EKP LKAGN YH + K VRGVAMN V+HP GG Sbjct: 1 MGKRLIIQRRGRGTPTYRSSSHRFRGKVAYRSYDKLEREGSLTGIVIDIIHDPGRSAPVAVVKFDNG-----EEKLVLAPESIAIDDEIECGVSASIEPGNTLPLSEIPEGTPVFNIENNPGDGGKFVRSSGTYASLITH--DVDKTMIEMPSGELKAFNPRSRATVGVVAGGGRKEKPFLKAGNRYHALKAKGKKMMTVRGVAMNAVDHPHGG 207
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_METBF (50S ribosomal protein L2P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl2p PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.938e-43 Identity = 82/214 (38.32%), Postives = 129/214 (60.28%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 MG+ I +Q +G G+ +++ +H K + +D N ++G V + HDP R AP+A+V F ++ L +A+EG+ G + CG A + GN++P+ +PEG +CN+E D G R+SG YA +++H +++ T V +PSG K + CRA++G VAGGGR ++P LKAG YH+ + + +P+V GVAMNPV+HP GG Sbjct: 1 MGKRIISQNRGRGTPTYRAPSHKYKAELRHPRVD---ENTSIQGKVINLEHDPARSAPIAKVVFE-----TGEERLLLASEGIAVGSTIECGDDADVRPGNIVPIGKVPEGFFICNIESKPNDGGRFVRSSGVYATVVTH--ESNRTAVAMPSGNIKWLNPKCRAVVGIVAGGGRVDRPWLKAGKKYHKMKTRAAKYPRVSGVAMNPVDHPFGG 204 HSP 2 Score: 35.4242 bits (80), Expect = 6.938e-43 Identity = 18/39 (46.15%), Postives = 22/39 (56.41%), Query Frame = 3 Query: 627 PGGASSWREDPQHMGHASTVRGDLPPASKVGLIAPRRIG 743 P G +W+ H G +TV + PP KVGLIA RR G Sbjct: 201 PFGGGAWK----HPGKPTTVSRNAPPGRKVGLIAARRTG 235
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_THEPD (50S ribosomal protein L2P OS=Thermofilum pendens (strain Hrk 5) GN=rpl2p PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.534e-42 Identity = 94/215 (43.72%), Postives = 132/215 (61.40%), Query Frame = 1 Query: 13 MGRVIRAQRKG-AGSVFKSHTHHRKGPAQFRSLDFGE-RNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 MG+ + QR+G GSVF++ R GPA++ + E +N L GVV +++H+PGRGAPLA V F K I EG+ GQ +Y G KA ++G+++ + ++PEG +V N+E GD G LAR+SG YA++++H+ N T ++LPS K + S RA IG VA GGR EKP+LKAG +H R K +P VRG AM+ HP GG Sbjct: 1 MGKRLLVQRRGRGGSVFRNPGWKRLGPARYPPYNPEEFKNKVLVGVVKDLLHEPGRGAPLALVEFEDG-----TKMYMIPPEGLAVGQKIYYGAKAPAVLGSIVEIGNVPEGTIVSNIEIRPGDGGKLARSSGAYALVLAHS--NGKTLIQLPSKKVKEVSSEARATIGMVAAGGRIEKPMLKAGKMWHWSRAKSFKYPTVRGKAMSAYAHPAGG 208 HSP 2 Score: 29.261 bits (64), Expect = 1.534e-42 Identity = 13/19 (68.42%), Postives = 14/19 (73.68%), Query Frame = 3 Query: 699 PPASKVGLIAPRRIGRFEG 755 PP KVG IAPRR GR +G Sbjct: 223 PPGRKVGHIAPRRTGRKKG 241
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_METMA (50S ribosomal protein L2P OS=Methanosarcina mazei GN=rpl2p PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.535e-42 Identity = 84/215 (39.07%), Postives = 129/215 (60.00%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFI-AAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 MG+ + +Q +G G+ +++ +H K + +D N L+G V +I HDP R AP+A+V F + +ELF+ A+EG+ G + CG A + GN++P+ ++PEG +CN+E D G R+SG YA +++H P T V +PSG K + CRA++G VAGGGR ++P LKAG YH+ + + +P+V VAMNP +HP GG Sbjct: 1 MGKRLISQNRGRGTPTYRAPSHKYKADLRHPRVD---ENTSLQGEVIDIEHDPARSAPIAKVAFENG------EELFLLASEGVAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNIESKPNDGGKFVRSSGVYATVVTHEPTR--TAVSMPSGNIKWLNPKCRAVVGIVAGGGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGG 204 HSP 2 Score: 35.4242 bits (80), Expect = 1.535e-42 Identity = 18/39 (46.15%), Postives = 22/39 (56.41%), Query Frame = 3 Query: 627 PGGASSWREDPQHMGHASTVRGDLPPASKVGLIAPRRIG 743 P G +W+ H G +TV + PP KVGLIA RR G Sbjct: 201 PFGGGAWK----HPGKPTTVSRNAPPGRKVGLIAARRTG 235
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_HYPBU (50S ribosomal protein L2P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl2p PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.601e-42 Identity = 108/252 (42.86%), Postives = 145/252 (57.54%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFI-AAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGGRTPSTWAMLALLGGIFPLPARWVLLHPGGLVASRVTG 762 MG+ + QR+G GS +++S PA++ L L+G V E++HDPGR PLA + + E +I AAEGMY GQ + G A + GN+LPV IPEG V N+E GD G L RA G YA+I+ + + T ++LPSG K +P+ RA IG VAG GR EKPLLKAG AY+++ KP+ WP+VRGVAMN V HP GG + + + + P P R V G +A+R TG Sbjct: 1 MGKRLIVQRRGKGSPLYRSRPWLHPAPARYPPLT----PVTLRGRVVELVHDPGRWVPLAHIVLENG------DEFYIPAAEGMYVGQIIEIGPDARPVNGNILPVGKIPEGTQVYNIEIRPGDGGKLVRAYGTYAIILGRS--GNKTIIQLPSGKVKEVPNDARATIGIVAGAGRLEKPLLKAGAAYYKWSAKPHVWPRVRGVAMNAVNHPHGGGSHQSPSFPTTVSRNAP-PGRKV-----GHIAARSTG 234
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_DESK1 (50S ribosomal protein L2P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl2p PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.658e-42 Identity = 101/214 (47.20%), Postives = 125/214 (58.41%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 MG+ I QR+G S VFK+ H PA++ LD + K VV +++HDPGR PLA+V + A EGMY GQ + G A + GN+LPV IPEG V N+E GD G RASG YAVI+ T+V+LPSG +P+ RAMIG +AGGGR EKPLLKAG AY+++ K WPKVRGVAMN HP GG Sbjct: 1 MGKRIIPQRRGKASPVFKTPDHIHVAPARYPLLDPSKT---YKAVVEDLVHDPGRWVPLAQVKLETGLVFYVP-----AVEGMYAGQIIEIGPGAKPVNGNILPVGMIPEGMQVVNIEKRPGDGGKFVRASGTYAVIVGRA--GGKTQVQLPSGRVIEVPNESRAMIGVIAGGGRLEKPLLKAGAAYYKWSAKSRVWPKVRGVAMNAAFHPHGG 204
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_PYRAE (50S ribosomal protein L2P OS=Pyrobaculum aerophilum GN=rpl2p PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.770e-41 Identity = 103/251 (41.04%), Postives = 138/251 (54.98%), Query Frame = 1 Query: 13 MGRVIRAQRKG-AGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGGRTPSTWAMLALLGGIFPLPARWVLLHPGGLVASRVTG 762 MG+ I QR+G GS F+S + R GP ++ L G +G KG V +I+H+PG AP+A++ + + AAEG+Y GQ V GK A+ GN++ + IPEG ++ NVE GD G ARA G YAV+I P+ + T ++LPSG + S RA +G VAGGGR EKP LKAG YH+ R K +P VRG AM+P HP GG + G P+P G + SR TG Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPL--GVISG--KGYVVDILHEPGLNAPVAKIVTENGVEFFNY-----AAEGLYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKRAGDGGKFARAGGTYAVVIGQKPEENKTIIRLPSGRTVEVDSRGRATVGIVAGGGRIEKPFLKAGKKYHRARAKAWKYPTVRGKAMSPYAHPHGGGSHQK--------GGTPVPKTAPPGQKVGFIGSRCTG 234
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_PYRCJ (50S ribosomal protein L2P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.312e-41 Identity = 102/251 (40.64%), Postives = 136/251 (54.18%), Query Frame = 1 Query: 13 MGRVIRAQRKG-AGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGGRTPSTWAMLALLGGIFPLPARWVLLHPGGLVASRVTG 762 MG+ I QR+G GS F+S + R GP ++ G +G+V EI+H+PG AP+A++ + + AAEG+Y GQ + G A VGNVLP+ IPEG +V NVE GD G AR+ G YA++I P+ + T V+LPSG + + RA IG VAGGGR EKP +KAG YH+ R K +P VRG AM+P HP GG + G P+P G + SR TG Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPNISG------RGIVVEILHEPGLNAPVAKIRMENGVEFFNY-----AAEGLYVGQVIQVGPDAPPAVGNVLPLGKIPEGTMVFNVEKRFGDGGKFARSGGTYALVIGQRPEENKTIVRLPSGRVIEVDARGRATIGIVAGGGRVEKPFVKAGKKYHRARAKSWKYPTVRGKAMSPYAHPHGGGSHQK--------GGTPVPKTAPPGQKVGFIGSRCTG 232 The following BLAST results are available for this feature:
BLAST of EY684565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684565 ID=EY684565; Name=EY684565; organism=Citrus sinensis; type=EST; length=883bpback to top |