EY684565
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_METLZ (50S ribosomal protein L2P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl2p PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.460e-36 Identity = 84/214 (39.25%), Postives = 117/214 (54.67%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 MG I Q +G G +++ +H K + FG ++ V +I HDP R P+A V + +KE + EG+ GQ + G +AT++ GN LP+ +IP G VCN+E GD G R+SG AVII + V++PSG K C A +G VAGGGR +KP+LKAG YH+ + WP+VRGVAMN ++HP GG Sbjct: 1 MGHRISTQSRGKGGPTYRAPSHQYKAELKH----FGSALETVRATVIDIEHDPARHTPIAVVKIEG--KASDKKEYALITEGVGIGQELVWGPEATVVNGNSLPLSAIPTGVAVCNIEARPGDGGKFVRSSGVQAVIIGKSAGK--VGVRMPSGKPKWFNEACLATVGLVAGGGRIDKPILKAGKQYHKMKTSATRWPRVRGVAMNVIDHPFGG 206 HSP 2 Score: 26.9498 bits (58), Expect = 2.460e-36 Identity = 13/28 (46.43%), Postives = 14/28 (50.00%), Query Frame = 3 Query: 660 QHMGHASTVRGDLPPASKVGLIAPRRIG 743 QH G TV P KVG +A RR G Sbjct: 210 QHPGKPKTVARGASPGRKVGSVAARRTG 237
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL8_ENCCU (60S ribosomal protein L8 OS=Encephalitozoon cuniculi GN=RPL8 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.895e-35 Identity = 72/173 (41.62%), Postives = 114/173 (65.90%), Query Frame = 1 Query: 136 KGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFI-AAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 +G V +I+H+ RGAP+A ++F K+ + + A+EGMYTGQ + G A + +GN+ ++++PEG V +VE GD G A +G Y+++++H + + T +K+PSG K + S CR ++G VAGGG +KPLLKA A+++ + + + +P+VRGVAMNPVEH GG Sbjct: 34 EGEVIDIVHERSRGAPVAIISF-------KEDDCMVPASEGMYTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNHRKETNETVIKIPSGKKLTVSSECRCIVGVVAGGGIHDKPLLKASVAHYKAKARGHVFPRVRGVAMNPVEHIHGG 199
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_CENSY (50S ribosomal protein L2P OS=Cenarchaeum symbiosum GN=rpl2p PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 8.250e-34 Identity = 75/214 (35.05%), Postives = 116/214 (54.21%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 MG+ +R+G G + F++ T + A++ + + GE+ +G V +++H+ GR APLA++ F A G G + G K+ + GNV+ V++IP+G VCNVE H GD G + +++G A + SH +KLPSG + RAM+G +AGGG +E+P + AG + +FR K +P VRGVA HP GG Sbjct: 1 MGKRPLVRRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLAKIRFEDGI-----VSYVPAVLGTRVGSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKHYGDGGAIVKSAGGNATVFSHGEGGVV--LKLPSGRFSTLNPKNRAMVGTLAGGGVSERPFMSAGGKWRRFRSKGRKYPIVRGVAQAAYVHPHGG 204 HSP 2 Score: 36.5798 bits (83), Expect = 8.250e-34 Identity = 16/29 (55.17%), Postives = 21/29 (72.41%), Query Frame = 3 Query: 660 QHMGHASTVRGDLPPASKVGLIAPRRIGR 746 QH+G +STV + PP +KVG IA R+ GR Sbjct: 208 QHVGQSSTVSRNAPPGAKVGSIAARKTGR 236
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_NITMS (50S ribosomal protein L2P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.250e-34 Identity = 75/215 (34.88%), Postives = 117/215 (54.42%), Query Frame = 1 Query: 13 MGRVIRAQRKG-AGSVFKSHTHHRKGP-AQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 MG+ +R+G G+ F+S + + G A + E++ +G + +++H+ GR APLA+V F A G G+ + G K+ + GNV+ +++IP+G +VCN+E H GD G + +++G A + SH + T VKLPSG + RAMIG +AGGG +E+P + AG + F+ K +P VRGVA HP GG Sbjct: 1 MGKRPLVRRRGRGGNQFRSTSTGKVGTKANYPRFPLSEQH---EGEIIDLVHERGREAPLAKVRFEDG-----SVSFVPAVLGAKVGETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEKHFGDGGAIVKSAGTDATVFSHGDEGVT--VKLPSGKFTTLNPKNRAMIGTLAGGGASERPFMSAGGKWRNFKAKGKKYPIVRGVAQAAYVHPHGG 205 HSP 2 Score: 38.5058 bits (88), Expect = 8.250e-34 Identity = 17/29 (58.62%), Postives = 21/29 (72.41%), Query Frame = 3 Query: 660 QHMGHASTVRGDLPPASKVGLIAPRRIGR 746 QH+G +STV D PP +KVG IA R+ GR Sbjct: 209 QHVGQSSTVSRDTPPGAKVGSIAARKTGR 237
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_METS5 (50S ribosomal protein L2P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl2p PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.026e-33 Identity = 90/251 (35.86%), Postives = 134/251 (53.39%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGGRTPSTWAMLALLGGIFPLPARWVLLHPGGLVASRVTG 762 MG+ + QR G G++ F++ R G ++ ++ G+ V +I+H+PG P+A+V ++ A +G+ +GQ + G+ + +GN++P + +PEG V NVE H GD G AR +G YA+++ + R LPSG K I +G VAGGG EKPLLKAGN Y +++VK WP VRGVAMN V HP GG + + + + P P R V G +A+R TG Sbjct: 1 MGKKLLQQRAGRGNINFRNPGWLRVGKVRYPTI-----TGHHIAKVVDILHNPGMTEPVAKVKLDTGIQFF-----IPAVQGLISGQKIEVGEGSPASLGNIVPAKDLPEGVYVSNVELHRGDGGRYARTAGSYAIVVGKSEGKVILR--LPSGKIKEIDENALVTVGTVAGGGVLEKPLLKAGNNYWKYKVKATKWPDVRGVAMNVVSHPHGGGLHQSVSRSSTVARNTP-PGRKV-----GHIAARRTG 233
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_METB6 (50S ribosomal protein L2P OS=Methanoregula boonei (strain 6A8) GN=rpl2p PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.952e-33 Identity = 80/214 (37.38%), Postives = 115/214 (53.74%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 MG I Q +G G +++ +H K + G+ + G + +I HDP R AP+A V K + EG+ G+ V G + GN LP++SIP G+ +CN+E D G R++G AV++ + D V++PSG K + CRA +G VAGGGR EKP +KAGN H+ R + WP+VRGVAMN ++HP GG Sbjct: 1 MGHRITTQNRGRGGPTYRAPSHRYKAALKH----IGDGTKSISGSIIDIEHDPARNAPIALVQLEDG-----SKVYILVTEGIGIGETVAWGADVKVKNGNTLPLQSIPTGSYICNIESRPNDGGKFVRSTGVQAVVV--DKIGDRIGVRMPSGKTKWFNARCRATVGIVAGGGRVEKPFVKAGNKSHKMRNTASNWPRVRGVAMNVIDHPFGG 203
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_METMJ (50S ribosomal protein L2P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 8.898e-33 Identity = 76/211 (36.02%), Postives = 107/211 (50.71%), Query Frame = 1 Query: 19 RVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 R+I R G +++ +H K + G+ + + G V +I HDP R AP+A +K +A EG+ G V G T+ GN LP+ IP GA VCN+E D G R+SG A++I D+ +++PSG K C A +G VAGGGR EKP +KAG + R WP+V+GV MN ++HP GG Sbjct: 4 RIIAQNRGKGGPTYRAPSHRYKAALRHA----GKNDALVSGNVIDIEHDPARHAPIALARLDSG-----EKIYVLATEGLGVGDTVSWGTGGTVKNGNTLPLGEIPVGAYVCNIEARPNDGGKFVRSSGVQALVIG-KADDGRVGIRMPSGKNKWFNGACMATVGIVAGGGRGEKPFVKAGKKHFHVRSSSERWPRVKGVCMNVIDHPFGG 204 HSP 2 Score: 28.8758 bits (63), Expect = 8.898e-33 Identity = 13/31 (41.94%), Postives = 17/31 (54.84%), Query Frame = 3 Query: 660 QHMGHASTVRGDLPPASKVGLIAPRRIGRFE 752 QH G TV P KVG +A RR G+++ Sbjct: 208 QHCGRPKTVARGTSPGRKVGHVAARRTGKWK 238
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_METHJ (50S ribosomal protein L2P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl2p PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 4.343e-32 Identity = 77/214 (35.98%), Postives = 108/214 (50.47%), Query Frame = 1 Query: 13 MGRVIRAQRKG-AGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 MG I Q +G G +++ +H K + G + + +I HDP R P+A V + + EGM G + G A + GN LP++ IP G+ VCN+E + D G RASG A + V++PSG+ K CRA IG VAGGGR+EKP +KAG YH+ + + WP+VRG AMN ++HP GG Sbjct: 1 MGHRITTQSRGHGGPTYRAPSHRYKAALKH----LGRAGETVSYKIIDIEHDPARHTPIALVDVPDG-----ENTYVLVTEGMGIGDVLTWGADAEIRNGNTLPLQEIPTGSSVCNIEAYPNDGGKFVRASGVQATVTDKMEGR--VAVRMPSGSTKWFNGQCRATIGIVAGGGRSEKPFVKAGKKYHKMKNTASNWPRVRGFAMNVIDHPFGG 203 HSP 2 Score: 29.6462 bits (65), Expect = 4.343e-32 Identity = 15/29 (51.72%), Postives = 15/29 (51.72%), Query Frame = 3 Query: 660 QHMGHASTVRGDLPPASKVGLIAPRRIGR 746 QH G TV P KVG IA RR GR Sbjct: 207 QHAGRPKTVSRGTSPGRKVGHIAARRTGR 235
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_NANEQ (50S ribosomal protein L2P OS=Nanoarchaeum equitans GN=rpl2p PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.076e-30 Identity = 92/252 (36.51%), Postives = 131/252 (51.98%), Query Frame = 1 Query: 13 MGRV-IRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGGRTPSTWAMLALLGGIFPLPARWVLLHPGGLVASRVTG 762 MG+V + QR+G GS F+S TH G + + D +KG V +I D APL V + + + L A G+ G VY GK+A +G++ P+ IPEG + +E++ GD G L RASGD+A+++ D V+LPSG K + + RA+IG +AGGGR EKP +KAGN Y+ + WP V GV N +HP GG+ S + + P P R V G + +R TG Sbjct: 1 MGKVRLLVQRRGRGSPTFRSPTHRAAGKVKIPTFD----GDLVKGKVVALIKDSIHYAPLMVVKWENG-----AQSLLPAPLGISVGDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLENNPGDGGKLVRASGDFALLVQKL--GDKVIVQLPSGQFKTLSANARAVIGVIAGGGRKEKPFVKAGNKYYWASSRNRHWPVVNGVKKNASDHPFGGKRHSNHSKPFTVSKWAP-PGRKV-----GYIGARKTG 235
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_THEVO (50S ribosomal protein L2P OS=Thermoplasma volcanium GN=rpl2p PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.429e-27 Identity = 80/214 (37.38%), Postives = 109/214 (50.93%), Query Frame = 1 Query: 13 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651 MG+ I QR+G GS V++S +H + L GE VV +IIH PGR +PL + +K IA G Y GQ + G T+ G + +IP+G+ V N+E GD G R++G +A+++SH +KLPSG+ + CRA +G VA G + P+LKAG H R K VRGVAMN V HP GG Sbjct: 1 MGKHIIPQRRGHGSLVYRSPSHRHV--VDVKHLKPGEY------VVKDIIHAPGRNSPLLELVDS-----TGKKVYQIAFTGAYVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSHG---SRVTLKLPSGSMRDFDPRCRATVGVVAASGIIDAPILKAGTHVHYLRSKAKRPYTVRGVAMNAVNHPHGG 198 The following BLAST results are available for this feature:
BLAST of EY684565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684565 ID=EY684565; Name=EY684565; organism=Citrus sinensis; type=EST; length=883bpback to top |