EY684565

Overview
NameEY684565
Unique NameEY684565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_PICTO (50S ribosomal protein L2P OS=Picrophilus torridus GN=rpl2p PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.679e-26
Identity = 78/214 (36.45%), Postives = 110/214 (51.40%), Query Frame = 1
Query:   13 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651
            MG+ I AQR+G GS V++S +H   G  ++       R+G  K  + +II  PGR  P+  +          +K   IA  G Y  Q ++ G   +  +G+V  + +IP+G+ V N+E   GD G   RA+G  A++ISH        +KLPSG  K     CRA +G +AG G  + P+LKAG      + K      VRGVAMN V HP GG
Sbjct:    1 MGKHIVAQRRGHGSLVYRSPSHRHLGDIKY------PRDGTYK--IEDIIQAPGRNTPVLLIR-----NEKNEKNYMIAFNGAYVNQEIHVGDIDSPAIGDVTYLANIPDGSYVYNIESIPGDGGKFCRAAGTAALVISHGA---YVSLKLPSGVNKEFHPRCRATVGFIAGSGARDIPILKAGTHIKYLQSKAKRPYTVRGVAMNAVNHPHGG 198          
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_BORRA (50S ribosomal protein L2 OS=Borrelia recurrentis (strain A1) GN=rplB PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.982e-26
Identity = 78/215 (36.28%), Postives = 115/215 (53.49%), Query Frame = 1
Query:   16 GRVIRAQRKGAG--SVFKSHTHHRKGPAQFRSLDFGERNGY-LKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651
            G+V RA R  +G  SV +    H++   ++R +DF  R+ + +   VA I +DP R   +A + +R        K   IA +G+  G  +  G  A + +GN LP+ +IP G +V N+E ++G  G L R +G YA+II+   D D   VKLPSG  ++I   C A +G+V         + KAG +    R      PKVRGVAMNP++HP GG
Sbjct:   37 GKVSRAGRDSSGRISVRRRGGGHKR---RYREIDFARRDKFGIPARVAAIEYDPNRSPNIALLVYRDG-----DKRYIIAPKGVKVGDILESGPNAPIKIGNALPLENIPVGKMVHNIELNIGKGGQLVRGAGGYAMIIA--SDGDYVTVKLPSGEMRMIFKKCIATLGEVGNEDYMNVSIGKAGKSRWLGR-----RPKVRGVAMNPIDHPHGG 236          
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_BORDL (50S ribosomal protein L2 OS=Borrelia duttonii (strain Ly) GN=rplB PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.982e-26
Identity = 78/215 (36.28%), Postives = 115/215 (53.49%), Query Frame = 1
Query:   16 GRVIRAQRKGAG--SVFKSHTHHRKGPAQFRSLDFGERNGY-LKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651
            G+V RA R  +G  SV +    H++   ++R +DF  R+ + +   VA I +DP R   +A + +R        K   IA +G+  G  +  G  A + +GN LP+ +IP G +V N+E ++G  G L R +G YA+II+   D D   VKLPSG  ++I   C A +G+V         + KAG +    R      PKVRGVAMNP++HP GG
Sbjct:   37 GKVSRAGRDSSGRISVRRRGGGHKR---RYREIDFARRDKFGIPARVAAIEYDPNRSPNIALLVYRDG-----DKRYIIAPKGVKVGDILESGPNAPIKIGNALPLENIPVGKMVHNIELNIGKGGQLVRGAGGYAMIIA--SDGDYVTVKLPSGEMRMIFKKCIATLGEVGNEDYMNVSIGKAGKSRWLGR-----RPKVRGVAMNPIDHPHGG 236          
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_THEAC (50S ribosomal protein L2P OS=Thermoplasma acidophilum GN=rpl2p PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.362e-25
Identity = 77/214 (35.98%), Postives = 109/214 (50.93%), Query Frame = 1
Query:   13 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651
            MG+ I  QR+G GS V++S +H      + + +D G        V+ +IIH PGR APL  +          +K   IA  G + GQ +  G   ++  G    + +IP+G+ V N+E   GD G   R++G +A+++SH        +KLPSG  +     CRA +G VA  G  + P+LKAG   H  R K      VRGVAMN V HP GG
Sbjct:    1 MGKHIIPQRRGHGSLVYRSPSHRHI--TEVKHVDQGTY------VIKDIIHAPGRNAPLLELMGSDG-----KKAYQIAFTGAFVGQNIVAGNVDSVSPGTTTVLANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSHGQH---VTLKLPSGRMRDFDPRCRATLGVVAASGIKDPPILKAGTHVHYLRSKAKRPYTVRGVAMNAVNHPHGG 198          
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_DESAP (50S ribosomal protein L2 OS=Desulforudis audaxviator (strain MP104C) GN=rplB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.568e-24
Identity = 74/214 (34.58%), Postives = 110/214 (51.40%), Query Frame = 1
Query:   22 VIRAQRKGAGSVFKSHT--HHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651
            ++   RK AG  F+      HR G  +  +R +DF      + G VA I +DP R A +A V +        +K   +A  G+  GQ +  G +A + VGN LP+R+IP G ++ N+E + G    + R++G  A +++   + D   V+LPSG  ++ P  CRA IGQV         + KAG A     ++P     VRGV MNPV+HP GG
Sbjct:   33 LVEPLRKKAGRNFQGRVTVRHRGGGHKRLYRVIDFKRNKDGVPGKVATIEYDPNRSANIALVNYADG-----EKRYIVAPAGLKVGQEIMSGPQADIKVGNALPLRNIPPGVLIHNIELYPGHGARVVRSAGGSAQLMA--KEGDYAHVRLPSGEVRLFPLDCRATIGQVGNVEHENIVIGKAGRA-RWLGIRPT----VRGVVMNPVDHPHGG 234          
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_MYCAP (50S ribosomal protein L2 OS=Mycoplasma agalactiae (strain PG2) GN=rplB PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.274e-23
Identity = 71/212 (33.49%), Postives = 103/212 (48.58%), Query Frame = 1
Query:   22 VIRAQRKGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651
            VI  +  G  +  K    H+ G  +  +R +DF      +   V  I +DP R A +  + +        +K   +A EG+  GQ V  G    ++VGN LP+ +IPEG  V NVE   G  G++AR++G  A I+  + D     ++L SG  + I + CRA IG V  G  +   L KAG + H         P VRG  MNP++HP GG
Sbjct:   36 VILKKNSGRNNQGKITVRHQGGRVKRYYRIIDFKRNKDDIPATVKSIEYDPNRSANICLLAYADG-----EKRYILAPEGIKVGQKVVSGNNVDILVGNSLPLSNIPEGTFVHNVEMQPGGGGIIARSAGTSAQILGKDDDGKYVVLRLKSGEMRRILARCRATIGTVGNGEHSLVLLGKAGRSRHL-----GVRPTVRGSVMNPIDHPHGG 237          
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_EDWI9 (50S ribosomal protein L2 OS=Edwardsiella ictaluri (strain 93-146) GN=rplB PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.274e-23
Identity = 67/186 (36.02%), Postives = 98/186 (52.69%), Query Frame = 1
Query:   94 QFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651
            Q+R +DF      +  VV  + +DP R A +A V ++       ++   +AA+G+  G  +  G  A +  GN LP+R+IP G+ V NVE   G  G LAR++G Y  I++   D     ++L SG  + IP+ CRA +G+V       + L KAG A  +        P VRG AMNPV+HP GG
Sbjct:   61 QYRLIDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAAKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVAR--DGAYVTLRLRSGEMRKIPADCRATLGEVGNAEHMLRVLGKAGAARWR-----GVRPTVRGTAMNPVDHPHGG 234          
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_BORGA (50S ribosomal protein L2 OS=Borrelia garinii GN=rplB PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.174e-23
Identity = 73/210 (34.76%), Postives = 110/210 (52.38%), Query Frame = 1
Query:   25 IRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGY-LKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651
            I  +R+G G       H RK    +R +DF  R+ + +   VA I +DP R A +A + ++       +K   I+ +G+  G  +  G  A + +GN LP+ +IP G  + N+E +VG  G L R++G YA+I++   D +   VKL SG  ++I   C A IG++         + KAG +    R      PKVRGVAMNPV+HP GG
Sbjct:   50 ISIRRRGGG-------HKRK----YRLIDFNRRDKFSIPARVASIEYDPNRSANIALLVYKDG-----EKRYIISPKGIKVGDVLESGPNAPIKIGNALPLENIPIGRTIHNIELNVGKGGQLVRSAGGYAMILA--SDGNYVTVKLSSGEMRLIFKKCIATIGEIGNEDYANVSIGKAGKSRWLGR-----RPKVRGVAMNPVDHPHGG 236          
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_BORBZ (50S ribosomal protein L2 OS=Borrelia burgdorferi (strain ZS7) GN=rplB PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.839e-23
Identity = 74/210 (35.24%), Postives = 110/210 (52.38%), Query Frame = 1
Query:   25 IRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGY-LKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651
            I  +R+G G       H RK    +R +DF  R+ + +   VA I +DP R A +A + ++       +K   I+ +G+  G  +  G  A + +GN LP+ +IP G  V N+E +VG  G L R++G YA+I++   D +   VKL SG  ++I   C A IG++         + KAG +    R      PKVRGVAMNPV+HP GG
Sbjct:   50 ISIRRRGGG-------HKRK----YRLIDFNRRDKFSIPARVASIEYDPNRSANIALLVYKDG-----EKRYIISPKGIKVGDVLESGPNAPIKIGNALPLENIPIGRTVHNIELNVGKGGQLIRSAGGYAMILA--SDGNYVTVKLSSGEMRLIFKKCIATIGEIGNEDYANISIGKAGKSRWLGR-----RPKVRGVAMNPVDHPHGG 236          
BLAST of EY684565 vs. ExPASy Swiss-Prot
Match: RL2_BORBU (50S ribosomal protein L2 OS=Borrelia burgdorferi GN=rplB PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.839e-23
Identity = 74/210 (35.24%), Postives = 110/210 (52.38%), Query Frame = 1
Query:   25 IRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGY-LKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHQFRVKPNCWPKVRGVAMNPVEHPRGG 651
            I  +R+G G       H RK    +R +DF  R+ + +   VA I +DP R A +A + ++       +K   I+ +G+  G  +  G  A + +GN LP+ +IP G  V N+E +VG  G L R++G YA+I++   D +   VKL SG  ++I   C A IG++         + KAG +    R      PKVRGVAMNPV+HP GG
Sbjct:   50 ISIRRRGGG-------HKRK----YRLIDFNRRDKFSIPARVASIEYDPNRSANIALLVYKDG-----EKRYIISPKGIKVGDVLESGPNAPIKIGNALPLENIPIGRTVHNIELNVGKGGQLIRSAGGYAMILA--SDGNYVTVKLSSGEMRLIFKKCIATIGEIGNEDYANISIGKAGKSRWLGR-----RPKVRGVAMNPVDHPHGG 236          
The following BLAST results are available for this feature:
BLAST of EY684565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL2_PICTO4.679e-2636.4550S ribosomal protein L2P OS=Picrophilus torridus ... [more]
RL2_BORRA7.982e-2636.2850S ribosomal protein L2 OS=Borrelia recurrentis (... [more]
RL2_BORDL7.982e-2636.2850S ribosomal protein L2 OS=Borrelia duttonii (str... [more]
RL2_THEAC1.362e-2535.9850S ribosomal protein L2P OS=Thermoplasma acidophi... [more]
RL2_DESAP2.568e-2434.5850S ribosomal protein L2 OS=Desulforudis audaxviat... [more]
RL2_MYCAP1.274e-2333.4950S ribosomal protein L2 OS=Mycoplasma agalactiae ... [more]
RL2_EDWI91.274e-2336.0250S ribosomal protein L2 OS=Edwardsiella ictaluri ... [more]
RL2_BORGA2.174e-2334.7650S ribosomal protein L2 OS=Borrelia garinii GN=rp... [more]
RL2_BORBZ2.839e-2335.2450S ribosomal protein L2 OS=Borrelia burgdorferi (... [more]
RL2_BORBU2.839e-2335.2450S ribosomal protein L2 OS=Borrelia burgdorferi G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-001-F06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684565 ID=EY684565; Name=EY684565; organism=Citrus sinensis; type=EST; length=883bp
CCACGCGTCCGAATGGGTCGTGTGATTCGCGCACAGCGTAAGGGTGCAGG
TTCGGTCTTCAAGTCCCACACCCACCACCGTAAGGGTCCGGCCCAGTTCC
GCAGCCTCGACTTCGGTGAGCGTAATGGTTACCTCAAGGGTGTCGTCGCA
GAGATTATTCACGATCCGGGTCGTGGTGCCCCGCTGGCCCGAGTTACCTT
TCGTCACCCTTTTCGCTACATGAAACAAAAGGAGCTTTTCATTGCCGCCG
AGGGTATGTACACGGGTCAGTTCGTGTACTGCGGCAAGAAAGCCACTCTG
ATGGTTGGTAATGTGTTGCCCGTTAGATCTATCCCTGAAGGAGCTGTCGT
TTGCAACGTTGAGCATCATGTTGGTGATCGCGGTGTTCTCGCTAGAGCTT
CTGGTGATTATGCCGTTATCATCAGTCATAACCCCGATAATGACACCACC
AGGGTCAAGCTTCCATCTGGTGCCAAAAAGATTATTCCAAGTGGCTGCAG
AGCTATGATTGGGCAGGTTGCCGGCGGAGGGAGGACTGAAAAACCCCTTC
TCAAAGCTGGTAATGCATACCACCAATTCAGAGTGAAGCCGAACTGCTGG
CCTAAGGTGCGTGGTGTGGCCATGAACCCGGTGGAGCATCCTCGTGGAGG
GAGGACCCCCAGCACATGGGCCATGCTAGCACTGTTAGGGGGGATCTTCC
CCCTGCCAGCAAGGTGGGTCTTATTGCACCCAGGAGGATTGGTCGCTTCG
AGGGTGACGGGTGGACTTGGGGCGGGGCGGCGCAAGGATAGTTCGTGGGG
GACGAGAGGCGGTCCTCACGGGATGCTGTCTTTACTTGTGGGGTTCGGCG
CACGGTGGAGAGGTGTTCCACTCCCACTCGGGA
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